BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027600
         (853 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   280   5e-73
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   273   6e-71
emb|CAN68642.1| hypothetical protein VITISV_030809 [Vitis vinifera]   273   6e-71
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   272   1e-70
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   272   1e-70
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe...   270   5e-70
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   266   9e-69
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   264   3e-68
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   259   7e-67
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   258   1e-66
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ...   257   3e-66
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus...   256   6e-66
ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thalian...   254   4e-65
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl...   253   6e-65
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   253   6e-65
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   252   1e-64
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps...   251   2e-64
ref|XP_004151635.1| PREDICTED: RNA pseudourine synthase 6, chlor...   251   2e-64
ref|XP_002867828.1| pseudouridine synthase family protein [Arabi...   251   2e-64
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   250   5e-64

>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 395

 Score =  280 bits (716), Expect = 5e-73
 Identities = 119/168 (70%), Positives = 143/168 (85%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+GVITHYMRPGN+ PRL+SE+ I+GW LCQLEVL+C++VPWP+TVTEEKY +EDCGWP 
Sbjct: 228 PVGVITHYMRPGNIPPRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPS 287

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQIRAQLAACGAP+VGDS+YMPA++AE  NPGVNP+G H+KQY 
Sbjct: 288 KDFAYECKINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYT 347

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            E  E + V  W+ +HGKEP +AIGLQAC+ISW D +H+Y AG PWWR
Sbjct: 348 GENDESMGVAEWVERHGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  273 bits (698), Expect = 6e-71
 Identities = 120/167 (71%), Positives = 141/167 (84%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+G++THYMRP N+APRLISED I+GW LCQLEVL+CKEVPWP+T+ EEKYCIED GWP 
Sbjct: 305 PIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPL 364

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           KN  ++C INLLTGRTHQIRAQLAACGAPIVGDS+YMPA++AE  +PG+NP+G ++K+Y 
Sbjct: 365 KNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYT 424

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWW 351
            E     AV  W+AQHGKEP +AIGLQACQISWDD EH Y AG PWW
Sbjct: 425 TENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>emb|CAN68642.1| hypothetical protein VITISV_030809 [Vitis vinifera]
          Length = 400

 Score =  273 bits (698), Expect = 6e-71
 Identities = 120/167 (71%), Positives = 141/167 (84%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+G++THYMRP N+APRLISED I+GW LCQLEVL+CKEVPWP+T+ EEKYCIED GWP 
Sbjct: 233 PIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPL 292

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           KN  ++C INLLTGRTHQIRAQLAACGAPIVGDS+YMPA++AE  +PG+NP+G ++K+Y 
Sbjct: 293 KNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYT 352

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWW 351
            E     AV  W+AQHGKEP +AIGLQACQISWDD EH Y AG PWW
Sbjct: 353 TENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 399


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
           gi|550340110|gb|EEE85437.2| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 470

 Score =  272 bits (696), Expect = 1e-70
 Identities = 116/170 (68%), Positives = 144/170 (84%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+GV+ HYMRP N+APRL+SE+ I+GW+LCQLEV++CK VPWP+ V EEKYC++DCGWP 
Sbjct: 299 PIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPS 358

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQIRAQLAA GAP+VGDS+YMPA++AE ++PG NP+G ++KQY 
Sbjct: 359 KDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYT 418

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR*R 342
            E+ + IAVE W+  HGKEP +AIGLQACQISWDD +H+Y AG PWWR R
Sbjct: 419 SEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWRCR 468


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  272 bits (695), Expect = 1e-70
 Identities = 117/170 (68%), Positives = 144/170 (84%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+GVI +YMRP N+APRL+SE+ + GW+LCQLEVL+C++VPWP+   EEKY +EDCGWP 
Sbjct: 305 PVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPS 364

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQIRAQLAA GAP+VGDS+YMPA++AE  NPG+NP+G HRKQY 
Sbjct: 365 KDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYT 424

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR*R 342
           +E  E +AV  W+AQHGKEPK+AIGLQAC+ISWD+ +H+Y AG PWWR R
Sbjct: 425 NESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWRCR 474


>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  270 bits (690), Expect = 5e-70
 Identities = 116/168 (69%), Positives = 140/168 (83%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G+ITHYMRP N+APRLISED I+ W+LCQLEV++CKE+PWPN V EEKYC+EDCGWP 
Sbjct: 308 PTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPS 367

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQ+RAQLAACGAPIVGDS+YMPA++AE  +PG+NP+G ++K Y 
Sbjct: 368 KDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYT 427

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            E  +  AV  W+A+HGKEP +AIGLQACQISWDD +H + A  PWWR
Sbjct: 428 TENDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 477

 Score =  266 bits (679), Expect = 9e-69
 Identities = 117/168 (69%), Positives = 139/168 (82%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           PLG ITHYMRP N+APRLISED I+ W+LCQLEV++CK+VPWP++V EE+Y +EDCGWP 
Sbjct: 308 PLGTITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWPS 367

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTG+THQIRAQLAACG P+VGDS+YMPA++AE  NP +NP+G H+K Y 
Sbjct: 368 KDYAYECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHYA 427

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            E  E IAV  WMA+HGKEP +AIGLQACQISWDD EH + A  PWWR
Sbjct: 428 GENDEEIAVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score =  264 bits (674), Expect = 3e-68
 Identities = 112/168 (66%), Positives = 139/168 (82%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G+ITHYMRP N+APRLISED I+GW+LCQLEVL+C+++PWP T  ++KYC+EDCGWP 
Sbjct: 310 PTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPS 369

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           ++  YEC INLLTG+THQIRAQ AA  AP++GDS+YMPA++A+  NPG+NP+G ++K + 
Sbjct: 370 QDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFS 429

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            E  +  AV NWMAQHGKEP +AIGLQACQISWDD EH Y AG PWWR
Sbjct: 430 SESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Glycine max]
          Length = 478

 Score =  259 bits (663), Expect = 7e-67
 Identities = 111/168 (66%), Positives = 137/168 (81%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G+ITHYMRP ++APRLISED I+GW+LCQLEVL+C++VPWP T  ++KYCIEDCGWP 
Sbjct: 310 PTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPS 369

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           ++  YEC INLLTG+THQIRAQ AA  AP++GDS+YMPA++A   NPG+NP+G ++K + 
Sbjct: 370 QDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFS 429

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            E  +  AV NW+AQHGKEP +AIGLQACQISWDD EH Y A  PWWR
Sbjct: 430 SESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
           chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  258 bits (660), Expect = 1e-66
 Identities = 112/180 (62%), Positives = 139/180 (77%), Gaps = 12/180 (6%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEI------------QGWNLCQLEVLDCKEVPWPNTVTE 708
           P G+I HYMRP N+APRLISE               +GW++CQLEVL+C ++PWP TV +
Sbjct: 287 PTGIIKHYMRPINMAPRLISEGXTTQIGMHSKDYFNKGWHICQLEVLECIKIPWPTTVVQ 346

Query: 707 EKYCIEDCGWPRKNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPG 528
           EKYC+EDCGWP ++  YEC INLLTGRTHQIRAQ AAC AP++GDS+YMPA++AE +NPG
Sbjct: 347 EKYCVEDCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPLIGDSMYMPAAIAEMMNPG 406

Query: 527 VNPYGNHRKQYEDEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
           +NP+G ++K +  E  +  AV NW+AQHGKEP +AIGLQACQISWDD EH+Y AG PWWR
Sbjct: 407 LNPFGKYKKDFTSESEKETAVINWIAQHGKEPSVAIGLQACQISWDDGEHIYEAGSPWWR 466


>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 491

 Score =  257 bits (657), Expect = 3e-66
 Identities = 114/171 (66%), Positives = 140/171 (81%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+GVITHYMRP N+APRL+SED I+GW LCQLEV++CK+VPWP+ V +E YCIED GWP 
Sbjct: 321 PIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWPL 380

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQ+RAQLAACGAPI+GDS+YMP ++AE  NPG+NP+G ++K + 
Sbjct: 381 KDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYKK-HT 439

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR*RE 339
            E  + IA+  W++Q GKEP +AIGLQACQISWDD EH Y A  PWWR R+
Sbjct: 440 SENDKEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWRSRK 490


>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  256 bits (655), Expect = 6e-66
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G+ITHYMRP N+APRLISED I+GW +CQLE+ +C++VPWP    ++KYC+EDCGWP 
Sbjct: 310 PTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGWPY 369

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           ++  YEC INLLTGRTHQIRAQ AAC AP+VGDS+YMPA++ +  NPG+NP+G +++ + 
Sbjct: 370 QDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKRDFS 429

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            E  +  AV NW+AQHGKEP +AIGLQACQISWDD +H Y +G PWWR
Sbjct: 430 SESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>ref|NP_193908.1| RNA pseudourine synthase 6 [Arabidopsis thaliana]
           gi|75212600|sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA
           pseudouridine synthase 6, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 6; AltName:
           Full=RNA-uridine isomerase 6; Flags: Precursor
           gi|4455285|emb|CAB36821.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268974|emb|CAB81284.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23296381|gb|AAN13057.1| unknown protein [Arabidopsis
           thaliana] gi|110741616|dbj|BAE98756.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332659101|gb|AEE84501.1| RNA pseudourine synthase 6
           [Arabidopsis thaliana]
          Length = 472

 Score =  254 bits (648), Expect = 4e-65
 Identities = 113/171 (66%), Positives = 138/171 (80%), Gaps = 3/171 (1%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+G+I+HYMRP N+APRL++ED IQGW+LCQLEVL+CK++PWP+  TE+K+ IEDCGW  
Sbjct: 302 PIGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTS 361

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K   YEC INLLTG+THQIRAQLAACGAP+VGDS+YMPA++AE  NP  NPYG  +K Y 
Sbjct: 362 KEFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYT 421

Query: 491 DEECER-IAVENWMAQHGKEPKMAIGLQACQISW--DDCEHVYMAGDPWWR 348
            EE ++  AV  W+ +HGKEP++ IGLQACQISW  DD EH Y AG PWWR
Sbjct: 422 MEENQKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472


>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X3 [Solanum tuberosum]
          Length = 440

 Score =  253 bits (646), Expect = 6e-65
 Identities = 107/168 (63%), Positives = 138/168 (82%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+G++THYMRP N+APRL+SED ++GW LCQLEVL+CK+VPWP++  +  Y +EDCGW  
Sbjct: 273 PIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWAL 332

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQIRAQLAAC AP+VGDS+YMPA++AE + PG NP+G ++K Y 
Sbjct: 333 KDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYS 392

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
           +E  + +A++ W+AQHGKEP +A+GLQACQISWDD +H Y A  PWWR
Sbjct: 393 NENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 440


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
           X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
           PREDICTED: RNA pseudouridine synthase 6,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  253 bits (646), Expect = 6e-65
 Identities = 107/168 (63%), Positives = 138/168 (82%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+G++THYMRP N+APRL+SED ++GW LCQLEVL+CK+VPWP++  +  Y +EDCGW  
Sbjct: 316 PIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGWAL 375

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQIRAQLAAC AP+VGDS+YMPA++AE + PG NP+G ++K Y 
Sbjct: 376 KDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYS 435

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
           +E  + +A++ W+AQHGKEP +A+GLQACQISWDD +H Y A  PWWR
Sbjct: 436 NENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
           sativus]
          Length = 475

 Score =  252 bits (644), Expect = 1e-64
 Identities = 113/168 (67%), Positives = 131/168 (77%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G++THYMRP NLAPRL+S D I GWNLCQLEVL+C+EV WP+   E KY IEDCGWP 
Sbjct: 304 PKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPS 363

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K   +EC INLLTGRTHQIRAQLA CGAP+VGDS+YMPA +AE  NPG+NP+G  +K+Y 
Sbjct: 364 KKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANPGLNPFGKCKKEYT 423

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            EE +  AV  W+A HGKEP +AIGLQA +ISWD  EH Y AG PWWR
Sbjct: 424 SEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
           gi|482553612|gb|EOA17805.1| hypothetical protein
           CARUB_v10006203mg [Capsella rubella]
          Length = 479

 Score =  251 bits (642), Expect = 2e-64
 Identities = 113/171 (66%), Positives = 138/171 (80%), Gaps = 3/171 (1%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G+I+HYMRP N+APRL+SED I+GW+LCQLEVL+CK++PWPN  TE+K+ IEDCGW  
Sbjct: 309 PTGIISHYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIPWPNAGTEKKHDIEDCGWTS 368

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K   YEC INLLTG+THQIRAQLAA GAP+VGDS+YMPA++AE +NP +NPYG  +K Y 
Sbjct: 369 KEFAYECTINLLTGKTHQIRAQLAAYGAPLVGDSMYMPAAIAEMMNPEINPYGKAKKHYT 428

Query: 491 DEECER-IAVENWMAQHGKEPKMAIGLQACQISW--DDCEHVYMAGDPWWR 348
            EE ++  AV  W+ +HGKEP++ IGLQACQISW  DD EH Y AG PWWR
Sbjct: 429 MEENDKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 479


>ref|XP_004151635.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 188

 Score =  251 bits (641), Expect = 2e-64
 Identities = 112/168 (66%), Positives = 132/168 (78%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G++THYMRP NLAPRL+S D I GWNLCQLEVL+C+EV WP+   E KY IEDCGWP 
Sbjct: 17  PKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPS 76

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K   +EC INLLTGRTHQIRAQLA  GAP+VGDS+YMPA++AE  NPG+NP+G  +K+Y 
Sbjct: 77  KKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKKEYT 136

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
            EE +  AV  W+A HGKEP +AIGLQA +ISWD  EH+Y AG PWWR
Sbjct: 137 SEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGEHIYNAGTPWWR 184


>ref|XP_002867828.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313664|gb|EFH44087.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 476

 Score =  251 bits (641), Expect = 2e-64
 Identities = 112/171 (65%), Positives = 137/171 (80%), Gaps = 3/171 (1%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P G+I+HYMRP N+APRL+SED I+GW+LCQLEVL+CK++PWP+  TE+K+ IEDCGW  
Sbjct: 306 PTGIISHYMRPKNMAPRLVSEDSIKGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTS 365

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K   YEC INLLTG+THQIRAQLAACGAP+VGDS+YMPA++AE +NP  N YG  +K Y 
Sbjct: 366 KEFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPDTNLYGKAKKHYT 425

Query: 491 DEECER-IAVENWMAQHGKEPKMAIGLQACQISW--DDCEHVYMAGDPWWR 348
            EE ++  AV  W+ +HGKEP++ IGLQACQISW  DD EH Y AG PWWR
Sbjct: 426 MEENDKDTAVAEWIDRHGKEPRVGIGLQACQISWYDDDGEHFYEAGTPWWR 476


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
           lycopersicum]
          Length = 448

 Score =  250 bits (638), Expect = 5e-64
 Identities = 105/168 (62%), Positives = 137/168 (81%)
 Frame = -3

Query: 851 PLGVITHYMRPGNLAPRLISEDEIQGWNLCQLEVLDCKEVPWPNTVTEEKYCIEDCGWPR 672
           P+G++THYMRP N+APRL+S D ++GW LCQLEVL+C++VPWP++  +  Y +EDCGW  
Sbjct: 281 PIGILTHYMRPINMAPRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTYNLEDCGWAL 340

Query: 671 KNVVYECHINLLTGRTHQIRAQLAACGAPIVGDSLYMPASLAERINPGVNPYGNHRKQYE 492
           K+  YEC INLLTGRTHQIRAQLAAC AP+VGDS+YMPA++AE + PG NP+G ++K Y 
Sbjct: 341 KDYAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKLYS 400

Query: 491 DEECERIAVENWMAQHGKEPKMAIGLQACQISWDDCEHVYMAGDPWWR 348
           +E  + +A++ W+AQHGKEP +A+GLQACQISWDD +H Y A  PWWR
Sbjct: 401 NENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448