BLASTX nr result

ID: Rheum21_contig00027508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027508
         (1084 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301522.1| hypothetical protein POPTR_0002s19420g [Popu...    59   3e-06
ref|XP_002320968.1| hypothetical protein POPTR_0014s11360g [Popu...    59   4e-06

>ref|XP_002301522.1| hypothetical protein POPTR_0002s19420g [Populus trichocarpa]
           gi|222843248|gb|EEE80795.1| hypothetical protein
           POPTR_0002s19420g [Populus trichocarpa]
          Length = 138

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 44/68 (64%)
 Frame = -2

Query: 870 R*REGRSSSAMKSERVVMTRKPQLRRQSQSQDLGFKTKVQTLKGLIPNPGSKGLEGLFRD 691
           R + GR + + +  R++M R+ +    +     G + +V+TLK LIPN  S GL+GLFR+
Sbjct: 50  RQKNGRHARSKRPGRILMKRRARAEGSTVRSGYGIERRVRTLKKLIPNSESMGLDGLFRE 109

Query: 690 TADYILAL 667
           TADYIL+L
Sbjct: 110 TADYILSL 117


>ref|XP_002320968.1| hypothetical protein POPTR_0014s11360g [Populus trichocarpa]
           gi|222861741|gb|EEE99283.1| hypothetical protein
           POPTR_0014s11360g [Populus trichocarpa]
          Length = 135

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -2

Query: 888 PPRNC*R*REGRSSSAMKSERVVMTRKPQLRRQSQSQDLGFKTKVQTLKGLIPNPGSKGL 709
           PPR   + + GR +   +  R++M R  ++   ++    G   +V+TLK LIPN  S GL
Sbjct: 46  PPR---KHKHGRHAEGKRPRRILMKRMARVEGSTRRAGYGVGRRVRTLKKLIPNGESLGL 102

Query: 708 EGLFRDTADYILAL 667
           +GLFR+TADYIL+L
Sbjct: 103 DGLFRETADYILSL 116


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