BLASTX nr result

ID: Rheum21_contig00027370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027370
         (581 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307258.1| hypothetical protein POPTR_0005s18030g [Popu...    61   2e-07

>ref|XP_002307258.1| hypothetical protein POPTR_0005s18030g [Populus trichocarpa]
           gi|222856707|gb|EEE94254.1| hypothetical protein
           POPTR_0005s18030g [Populus trichocarpa]
          Length = 105

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
 Frame = -2

Query: 439 IFLLVFFLQS-PFVHGRQLREQASNLPTTHHDHENGATSHVKGSESASTTQAFEDTNLDP 263
           +FL++FF Q   F+ GR L+ + SN        EN +  HV   +S  T  A   +   P
Sbjct: 11  VFLVLFFSQELKFIEGRHLKTRTSNKFLQKELVENNSKLHVN-EKSDKTVNATPMSPSSP 69

Query: 262 PTT----------GRRDDYRPTSPGRSPGVGHSIQN 185
           PT           G  DD+RPT+PG SPGVGHS+QN
Sbjct: 70  PTPVVSEPHPSPPGHVDDFRPTTPGHSPGVGHSLQN 105


Top