BLASTX nr result
ID: Rheum21_contig00027285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00027285
(401 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis... 96 5e-18
ref|XP_006343835.1| PREDICTED: F-box protein SKIP8-like [Solanum... 94 1e-17
emb|CBI34504.3| unnamed protein product [Vitis vinifera] 94 1e-17
ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera] 94 1e-17
ref|XP_004245504.1| PREDICTED: F-box protein SKIP8-like [Solanum... 91 2e-16
gb|EMJ10590.1| hypothetical protein PRUPE_ppa009155mg [Prunus pe... 89 6e-16
ref|XP_002299461.2| hypothetical protein POPTR_0001s10800g [Popu... 87 2e-15
ref|XP_004298920.1| PREDICTED: F-box protein SKIP8-like [Fragari... 87 3e-15
ref|XP_002303658.1| hypothetical protein POPTR_0003s14150g [Popu... 87 3e-15
gb|EXC24701.1| hypothetical protein L484_003143 [Morus notabilis] 86 5e-15
ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine... 86 7e-15
ref|XP_006439315.1| hypothetical protein CICLE_v10021394mg [Citr... 85 1e-14
ref|XP_006852621.1| hypothetical protein AMTR_s00021p00230990 [A... 84 1e-14
ref|XP_006476359.1| PREDICTED: F-box protein SKIP8-like [Citrus ... 83 3e-14
gb|EOY25066.1| Nuclear transport factor 2 family protein [Theobr... 83 3e-14
ref|XP_003530424.1| PREDICTED: F-box protein SKIP8-like [Glycine... 83 4e-14
ref|XP_002509987.1| conserved hypothetical protein [Ricinus comm... 83 4e-14
gb|ESW32176.1| hypothetical protein PHAVU_002G299800g [Phaseolus... 81 1e-13
emb|CBI24803.3| unnamed protein product [Vitis vinifera] 81 1e-13
ref|XP_004503605.1| PREDICTED: F-box protein SKIP8-like isoform ... 80 4e-13
>ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis sativus]
gi|449506211|ref|XP_004162683.1| PREDICTED: F-box
protein SKIP8-like [Cucumis sativus]
Length = 313
Score = 95.9 bits (237), Expect = 5e-18
Identities = 66/140 (47%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = -1
Query: 398 ILAAFTLLCCAIGVF-GVRLLSRNWKSQSRESVSGRIGRSAESDFASRKXXXXXXXCDGA 222
I A T LC + +F VRL+S + +++ S +G +R G
Sbjct: 18 IAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVG--------TRNCNCTCSLNGGV 69
Query: 221 VFSG-------EGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTH 63
V G S S NG A E+ EK A VV ERQTGASMMEQLVPEITTH
Sbjct: 70 VIRGLDPRAEITSSTSTSMPYLNGRAVEVLEK---APVVVTERQTGASMMEQLVPEITTH 126
Query: 62 ALSYLDYPSLCRLSMTNSLM 3
ALSYLDYPSLCRLSMTNSLM
Sbjct: 127 ALSYLDYPSLCRLSMTNSLM 146
>ref|XP_006343835.1| PREDICTED: F-box protein SKIP8-like [Solanum tuberosum]
Length = 291
Score = 94.4 bits (233), Expect = 1e-17
Identities = 61/129 (47%), Positives = 72/129 (55%)
Frame = -1
Query: 389 AFTLLCCAIGVFGVRLLSRNWKSQSRESVSGRIGRSAESDFASRKXXXXXXXCDGAVFSG 210
A T +CC + V L R+ +SV + G + + SR +V +G
Sbjct: 9 AVTFICCFVAVAAAFLTHRS------KSVRTKGGEDSCNCVCSRGSCGGGRFEKTSVLNG 62
Query: 209 EGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYPSLC 30
S S V G GEM EK + V E+ TGASMMEQLVPEITTHALSYLDYPSLC
Sbjct: 63 GSSSS---SVLGGVEGEMVEK--VPVTVAAEKLTGASMMEQLVPEITTHALSYLDYPSLC 117
Query: 29 RLSMTNSLM 3
RLSMTNSLM
Sbjct: 118 RLSMTNSLM 126
>emb|CBI34504.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 94.4 bits (233), Expect = 1e-17
Identities = 65/135 (48%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = -1
Query: 401 LILAAFTLLCCAIGVFGVRLLSRNW--KSQSRESVSGRIGRSAESDFASRKXXXXXXXCD 228
L+ + LC +F VR ++ KS+S ES G G S RK C
Sbjct: 35 LVALVVSGLCLVCALFAVRFSPASFGRKSRSVESDGGGSGGSL------RKACSCDCLCR 88
Query: 227 GAVFSGEGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYL 48
A + + NG A EM ++ A VV ERQTGASMMEQLVPEITTHALSYL
Sbjct: 89 SAESGPATATAAAAAYLNGGAEEMLDR----ALVVSERQTGASMMEQLVPEITTHALSYL 144
Query: 47 DYPSLCRLSMTNSLM 3
DYPSLCRLSMTNSLM
Sbjct: 145 DYPSLCRLSMTNSLM 159
>ref|XP_002265246.1| PREDICTED: F-box protein SKIP8 [Vitis vinifera]
Length = 307
Score = 94.4 bits (233), Expect = 1e-17
Identities = 65/135 (48%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = -1
Query: 401 LILAAFTLLCCAIGVFGVRLLSRNW--KSQSRESVSGRIGRSAESDFASRKXXXXXXXCD 228
L+ + LC +F VR ++ KS+S ES G G S RK C
Sbjct: 17 LVALVVSGLCLVCALFAVRFSPASFGRKSRSVESDGGGSGGSL------RKACSCDCLCR 70
Query: 227 GAVFSGEGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYL 48
A + + NG A EM ++ A VV ERQTGASMMEQLVPEITTHALSYL
Sbjct: 71 SAESGPATATAAAAAYLNGGAEEMLDR----ALVVSERQTGASMMEQLVPEITTHALSYL 126
Query: 47 DYPSLCRLSMTNSLM 3
DYPSLCRLSMTNSLM
Sbjct: 127 DYPSLCRLSMTNSLM 141
>ref|XP_004245504.1| PREDICTED: F-box protein SKIP8-like [Solanum lycopersicum]
Length = 361
Score = 90.5 bits (223), Expect = 2e-16
Identities = 60/129 (46%), Positives = 71/129 (55%)
Frame = -1
Query: 389 AFTLLCCAIGVFGVRLLSRNWKSQSRESVSGRIGRSAESDFASRKXXXXXXXCDGAVFSG 210
A TL+CC V L R+ +SV + G + + S +V +G
Sbjct: 9 AVTLICCFFAVAAACLTHRS------KSVRTKGGEDSCNCACSHGSCGGGRFDKTSVLNG 62
Query: 209 EGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYPSLC 30
S G V G EM EK ++ V E+ TGASMMEQLVPEITTHALSYLDYPSLC
Sbjct: 63 GSS---GSSVFGGFEEEMVEK--VSVTVAAEKLTGASMMEQLVPEITTHALSYLDYPSLC 117
Query: 29 RLSMTNSLM 3
RLSMTNSLM
Sbjct: 118 RLSMTNSLM 126
>gb|EMJ10590.1| hypothetical protein PRUPE_ppa009155mg [Prunus persica]
Length = 304
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/73 (65%), Positives = 52/73 (71%)
Frame = -1
Query: 221 VFSGEGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDY 42
V SG S+ + NG G +K A + ERQTGASMMEQLVPEITTHALSYLDY
Sbjct: 68 VVSGSDSEPLRAPHLNGGTGPDVTEK--TATAITERQTGASMMEQLVPEITTHALSYLDY 125
Query: 41 PSLCRLSMTNSLM 3
PSLCRLSMTNSLM
Sbjct: 126 PSLCRLSMTNSLM 138
>ref|XP_002299461.2| hypothetical protein POPTR_0001s10800g [Populus trichocarpa]
gi|550346973|gb|EEE84266.2| hypothetical protein
POPTR_0001s10800g [Populus trichocarpa]
Length = 302
Score = 87.0 bits (214), Expect = 2e-15
Identities = 50/75 (66%), Positives = 55/75 (73%)
Frame = -1
Query: 227 GAVFSGEGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYL 48
G+V S + S + EK NG G A +VVE+QTGASMMEQLVPEITTHALSYL
Sbjct: 69 GSVNSAD-SFTAEEKYLNGG--------GAAEEMVVEKQTGASMMEQLVPEITTHALSYL 119
Query: 47 DYPSLCRLSMTNSLM 3
DYPSLCRLSMTNSLM
Sbjct: 120 DYPSLCRLSMTNSLM 134
>ref|XP_004298920.1| PREDICTED: F-box protein SKIP8-like [Fragaria vesca subsp. vesca]
Length = 293
Score = 86.7 bits (213), Expect = 3e-15
Identities = 66/132 (50%), Positives = 72/132 (54%)
Frame = -1
Query: 398 ILAAFTLLCCAIGVFGVRLLSRNWKSQSRESVSGRIGRSAESDFASRKXXXXXXXCDGAV 219
+ AFT L + V VR S S+ R S S S E+D K C+GAV
Sbjct: 16 VALAFTFLSLLLAVLAVRSRS----SKPRRSQSDGGSSSTEND----KLCNCLCYCNGAV 67
Query: 218 FSGEGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYP 39
GS+ V NG EKK AV TGASMMEQLVPEITTHALSYLDYP
Sbjct: 68 ---TGSEPVDVPHLNGET----EKK---TAVTEAETTGASMMEQLVPEITTHALSYLDYP 117
Query: 38 SLCRLSMTNSLM 3
SLCRLSMTNSLM
Sbjct: 118 SLCRLSMTNSLM 129
>ref|XP_002303658.1| hypothetical protein POPTR_0003s14150g [Populus trichocarpa]
gi|222841090|gb|EEE78637.1| hypothetical protein
POPTR_0003s14150g [Populus trichocarpa]
Length = 301
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = -1
Query: 170 SAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
+AG+ G A +VV++QTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 78 TAGKYVNGVGAAEDMVVDKQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 133
>gb|EXC24701.1| hypothetical protein L484_003143 [Morus notabilis]
Length = 297
Score = 85.9 bits (211), Expect = 5e-15
Identities = 62/132 (46%), Positives = 72/132 (54%)
Frame = -1
Query: 398 ILAAFTLLCCAIGVFGVRLLSRNWKSQSRESVSGRIGRSAESDFASRKXXXXXXXCDGAV 219
+ FT LC + +F R L W R+ +S + S K C+G+V
Sbjct: 18 VAIVFTALCFFLVLFSARSLPL-WP---------RLLQSDGGEKRSEKLCDCRCCCNGSV 67
Query: 218 FSGEGSKSVGEKVANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYP 39
G S GE + EM E V+ ERQTGASMMEQLVPEITTHALSYLDYP
Sbjct: 68 ----GGCSEGETAPYLNGTEMAENW----PVLRERQTGASMMEQLVPEITTHALSYLDYP 119
Query: 38 SLCRLSMTNSLM 3
SLCRLSMTNSLM
Sbjct: 120 SLCRLSMTNSLM 131
>ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
Length = 286
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/59 (74%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 NGSAGEMCEKKGLAA-AVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
NG EM E + A AV+ ER+TG+SMME+LVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 63 NGGCTEMLEPSPVPAPAVLTERRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLM 121
>ref|XP_006439315.1| hypothetical protein CICLE_v10021394mg [Citrus clementina]
gi|557541577|gb|ESR52555.1| hypothetical protein
CICLE_v10021394mg [Citrus clementina]
Length = 297
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/67 (70%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Frame = -1
Query: 191 GEKVANGSAGEMCE----KKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRL 24
G A+ + EM E AAAVV ER +GASMMEQLVPEITTHALSYLDYPSLCRL
Sbjct: 64 GPAAASAAEREMLEVGRHAATAAAAVVAERGSGASMMEQLVPEITTHALSYLDYPSLCRL 123
Query: 23 SMTNSLM 3
SMTNSLM
Sbjct: 124 SMTNSLM 130
>ref|XP_006852621.1| hypothetical protein AMTR_s00021p00230990 [Amborella trichopoda]
gi|548856232|gb|ERN14088.1| hypothetical protein
AMTR_s00021p00230990 [Amborella trichopoda]
Length = 252
Score = 84.3 bits (207), Expect = 1e-14
Identities = 45/59 (76%), Positives = 47/59 (79%)
Frame = -1
Query: 179 ANGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
ANGSAGE EK +RQ+GASMMEQLVPEITTHALSYLDYPSLCRLSMTNS M
Sbjct: 22 ANGSAGEKYEKP--------DRQSGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSSM 72
>ref|XP_006476359.1| PREDICTED: F-box protein SKIP8-like [Citrus sinensis]
Length = 297
Score = 83.2 bits (204), Expect = 3e-14
Identities = 47/67 (70%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Frame = -1
Query: 191 GEKVANGSAGEMCEKKGLAA----AVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRL 24
G A+ + EM E AA AVV ER +GASMMEQLVPEITTHALSYLDYPSLCRL
Sbjct: 64 GPAAASAAEREMLEVGRHAATAATAVVAERGSGASMMEQLVPEITTHALSYLDYPSLCRL 123
Query: 23 SMTNSLM 3
SMTNSLM
Sbjct: 124 SMTNSLM 130
>gb|EOY25066.1| Nuclear transport factor 2 family protein [Theobroma cacao]
Length = 309
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/59 (76%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Frame = -1
Query: 173 GSAGEMCEKKGLA--AAVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
GSAG + E A + V ERQ+GASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 84 GSAGTVQEGMVTADVSKVAAERQSGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 142
>ref|XP_003530424.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
Length = 284
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/59 (72%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 NGSAGEMCEKKGLAA-AVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
NG EM E + A AV+ ER+ G+SMME+LVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 63 NGGRTEMLEPSPVPAPAVLTERRMGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLM 121
>ref|XP_002509987.1| conserved hypothetical protein [Ricinus communis]
gi|223549886|gb|EEF51374.1| conserved hypothetical
protein [Ricinus communis]
Length = 302
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 125 VVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
VV+RQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 95 VVDRQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 135
>gb|ESW32176.1| hypothetical protein PHAVU_002G299800g [Phaseolus vulgaris]
Length = 289
Score = 81.3 bits (199), Expect = 1e-13
Identities = 45/59 (76%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 NGSAGEMCEKKGLAAAVVV-ERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
NG A EM E + A VV+ ER TG+SMME+LVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 67 NGGA-EMLEPAPVPAPVVLAERLTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLM 124
>emb|CBI24803.3| unnamed protein product [Vitis vinifera]
Length = 90
Score = 81.3 bits (199), Expect = 1e-13
Identities = 45/58 (77%), Positives = 47/58 (81%)
Frame = -1
Query: 176 NGSAGEMCEKKGLAAAVVVERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
NG A EM ++ A VV ERQT ASMMEQLVPEITTHALSYLDY SLCRLSMTNSLM
Sbjct: 9 NGGAEEMQDR----ALVVSERQTRASMMEQLVPEITTHALSYLDYLSLCRLSMTNSLM 62
>ref|XP_004503605.1| PREDICTED: F-box protein SKIP8-like isoform X2 [Cicer arietinum]
Length = 279
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/59 (69%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 NGSAGEMCEKKGLAAAVVV-ERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLM 3
N + EM + A VV+ +R+TG+SMME+LVPEITTHALSYLDYPSLCRLSMTNSLM
Sbjct: 56 NAAVSEMLDISPSPAPVVLADRRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLM 114