BLASTX nr result
ID: Rheum21_contig00027166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00027166
(202 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 135 7e-30
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 132 6e-29
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 132 6e-29
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 132 6e-29
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 132 6e-29
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 132 6e-29
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 131 1e-28
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 130 2e-28
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 129 3e-28
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 121 8e-26
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 105 5e-21
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 96 5e-18
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 92 5e-17
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 92 5e-17
ref|YP_263303.1| replication protein [Lily virus X] gi|69608744|... 83 3e-14
gb|AHB87068.1| putative RNA-dependent RNA polymerase, partial [S... 82 1e-13
gb|AFM77886.1| replicase [Hosta virus X] 82 1e-13
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 82 1e-13
ref|YP_001655010.1| replicase protein [Phaius virus X] gi|166157... 81 1e-13
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA... 81 1e-13
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 135 bits (339), Expect = 7e-30
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNSKFLANKLGVYSSNS
Sbjct: 79 VILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 138
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 139 CPLKVTY 145
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 132 bits (331), Expect = 6e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNS
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNS 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 132 bits (331), Expect = 6e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNS
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNS 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 132 bits (331), Expect = 6e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNS
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNS 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 132 bits (331), Expect = 6e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNS
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNS 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 132 bits (331), Expect = 6e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNS
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNS 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 131 bits (329), Expect = 1e-28
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
+ILTGDPRQSTHHEANEEALISKL+PATT FSELSRYYINATHRNSKFLANKLG+YSSN
Sbjct: 736 IILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINATHRNSKFLANKLGIYSSNH 795
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 796 CPLKVTY 802
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 130 bits (326), Expect = 2e-28
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSN
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNP 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 129 bits (325), Expect = 3e-28
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSK LANKLGVYSSNS
Sbjct: 748 VILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKLLANKLGVYSSNS 807
Query: 22 CPLKVTY 2
CPLKVTY
Sbjct: 808 CPLKVTY 814
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 121 bits (304), Expect = 8e-26
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQSTHHE+NEEALISKL PATTI+S SRYYINAT RNSKFLANKLGVYS+NS
Sbjct: 753 VILTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINATLRNSKFLANKLGVYSANS 812
Query: 22 CPLKVTY 2
CPL VTY
Sbjct: 813 CPLNVTY 819
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 105 bits (263), Expect = 5e-21
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -1
Query: 199 ILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSC 20
ILTGDPRQSTHHE+NE+A+I++L PAT IFS L RYYINATHRN K LANKLGVYSSN
Sbjct: 730 ILTGDPRQSTHHESNEQAMIAQLEPATKIFSALCRYYINATHRNVKELANKLGVYSSNPS 789
Query: 19 PLKVTY 2
PL V+Y
Sbjct: 790 PLHVSY 795
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/67 (64%), Positives = 56/67 (83%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
++LTGD +QS HHE NE+A+I++L P+T IFS+ SRYYINATHRN+K LAN LGVYS N+
Sbjct: 823 IVLTGDNKQSVHHETNEQAMIAQLEPSTQIFSQFSRYYINATHRNAKKLANMLGVYSDNN 882
Query: 22 CPLKVTY 2
LK+T+
Sbjct: 883 KELKITH 889
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN + LANKL VYS
Sbjct: 755 VILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRNKRDLANKLEVYSEKE 814
Query: 22 CPLKVT 5
K+T
Sbjct: 815 GETKIT 820
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus]
gi|56792005|gb|AAW30448.1| viral replicase [Hydrangea
ringspot virus]
Length = 1386
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN + LANKL VYS
Sbjct: 755 VILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRNKRDLANKLEVYSEKE 814
Query: 22 CPLKVT 5
K+T
Sbjct: 815 GETKIT 820
>ref|YP_263303.1| replication protein [Lily virus X] gi|69608744|emb|CAG24007.1|
replication protein [Lily virus X]
Length = 1298
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
+ILTGDP+Q++HHE N++ALI+ L PA +FS RYY+NATHRN + LAN LGVYS S
Sbjct: 671 LILTGDPKQTSHHETNDQALIAHLEPAHVVFSSHCRYYLNATHRNRQDLANMLGVYSETS 730
Query: 22 CPLKVT 5
++T
Sbjct: 731 GVTRIT 736
>gb|AHB87068.1| putative RNA-dependent RNA polymerase, partial [Salvia virus]
Length = 312
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGDPRQS +HE N++A+I+ L PA+ F + R+YINATHRN + LANKLGVYS
Sbjct: 61 VILTGDPRQSFYHETNDQAMIASLEPASDEFKQSCRFYINATHRNRRDLANKLGVYSELD 120
Query: 22 CPLKVT 5
K+T
Sbjct: 121 GDTKIT 126
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGD +Q++HHE+N+ A+I+ L PA FS+ RYY+NATHRN + LAN LG+YS
Sbjct: 828 VILTGDAKQASHHESNDNAMIAGLDPAALEFSKFCRYYLNATHRNPRNLANALGIYSEKP 887
Query: 22 CPLKVTY 2
LKVT+
Sbjct: 888 GNLKVTF 894
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = -1
Query: 199 ILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
ILTGDPRQS++HE+NE A+IS+LAP+T+ F + RYYINATHRN + LA LGVYS +
Sbjct: 1077 ILTGDPRQSSYHESNEGAMISQLAPSTSEFGQYCRYYINATHRNKQDLARMLGVYSERT 1135
>ref|YP_001655010.1| replicase protein [Phaius virus X] gi|166157387|dbj|BAG06154.1|
replicase protein [Phaius virus X]
Length = 1298
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/66 (54%), Positives = 50/66 (75%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
+ILTGDP+Q++H+EAN++A+ SKLAPA +F+ RYY+NATHRN + LAN LGVY +
Sbjct: 671 LILTGDPQQTSHYEANDQAMSSKLAPAVEVFAPYCRYYLNATHRNKRDLANMLGVYGEQA 730
Query: 22 CPLKVT 5
+T
Sbjct: 731 GSTHIT 736
>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
[Hosta virus X]
Length = 1507
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -1
Query: 202 VILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNS 23
VILTGD +Q++HHE+N+ A+I+ L PA FS+ RYY+NATHRN + LAN LG+YS
Sbjct: 862 VILTGDAKQASHHESNDNAMIAGLDPAAFEFSKFCRYYLNATHRNPRNLANALGIYSEKP 921
Query: 22 CPLKVTY 2
LKVT+
Sbjct: 922 GNLKVTF 928