BLASTX nr result

ID: Rheum21_contig00027160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00027160
         (485 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [V...    77   3e-12
gb|AFO63283.1| bZIP4 [Tamarix hispida]                                 76   5e-12
ref|XP_002535507.1| transcription factor, putative [Ricinus comm...    66   5e-09
ref|XP_002300925.2| hypothetical protein POPTR_0002s07020g [Popu...    59   7e-07

>ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [Vitis vinifera]
          Length = 350

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 57/141 (40%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
 Frame = +1

Query: 109 MNPEFPETQTTSGPFC-QVDINQMPEAPQRGSHHRRAFSETFFRXXXXXXXXXXXXXXXX 285
           M+  F     T+ PF  + DI+ MP+AP RG+HHRRA SETFFR                
Sbjct: 1   MDHHFAGKPLTASPFGNRADIDHMPDAPYRGAHHRRAQSETFFRF--------------- 45

Query: 286 XATTEAVAINCSATATRDNQLD------------VPMTFDSGKPEDS-GRYIKNAGGR-- 420
              ++ + ++  A    D  LD            VPM  DS K EDS G Y  +A  +  
Sbjct: 46  ---SDDILLDADADVDVDFNLDIISDNTNSGAAGVPMAVDSSKSEDSNGGYSASAKAKSL 102

Query: 421 PPISHFRSLSVDASADFFEGL 483
            PI+HFRSLSVD  ADFFEGL
Sbjct: 103 DPINHFRSLSVD--ADFFEGL 121


>gb|AFO63283.1| bZIP4 [Tamarix hispida]
          Length = 347

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 55/129 (42%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
 Frame = +1

Query: 109 MNPEFPETQTTSGPFCQ-VDINQMPEAPQRGSHHRRAFSETFFRXXXXXXXXXXXXXXXX 285
           MNP +  +++ SGPF + V I+Q+PE PQR +HHRRA S+T FR                
Sbjct: 1   MNPNY-YSKSGSGPFSRSVVIDQIPETPQRAAHHRRAHSDTSFRFPDDLLFDVSDVDLSS 59

Query: 286 XATTEAVAINCSATATRDNQLDVPMTFDSGKPEDSGRYIKNAGGRPP---ISHFRSLSVD 456
                   IN S   T  N   VPMT DS K ++S   +K+   RPP    +H RSLSVD
Sbjct: 60  LDLLTTNHIN-SPPPTECNH--VPMTLDSSKSDESSSDVKSTATRPPPPRHNHLRSLSVD 116

Query: 457 ASADFFEGL 483
             ADFFEGL
Sbjct: 117 --ADFFEGL 123


>ref|XP_002535507.1| transcription factor, putative [Ricinus communis]
           gi|223522845|gb|EEF26876.1| transcription factor,
           putative [Ricinus communis]
          Length = 283

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
 Frame = +1

Query: 160 VDINQMPEAPQRGSHHRRAFSETFFRXXXXXXXXXXXXXXXXXATTEAVAINCSATATRD 339
           +DI QMP+ PQRGSHHRRA S+T FR                             + +  
Sbjct: 12  MDIEQMPDTPQRGSHHRRAHSDTSFRFDDLLLFDPSDLDLSALDLPTPTPPRGGGSGSGG 71

Query: 340 NQLDVPMTFDSGKPED--SGRYIKNAGG---RP-PISHFRSLSVDASADFFEGL 483
                PMT DSG   D  +  + +N+GG   +P PI+H RSLSVD  +DFF+GL
Sbjct: 72  GGGGAPMTVDSGSVSDDSAASHSQNSGGPNLKPKPINHLRSLSVD--SDFFDGL 123


>ref|XP_002300925.2| hypothetical protein POPTR_0002s07020g [Populus trichocarpa]
           gi|118488783|gb|ABK96202.1| unknown [Populus
           trichocarpa] gi|550344446|gb|EEE80198.2| hypothetical
           protein POPTR_0002s07020g [Populus trichocarpa]
          Length = 340

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/108 (37%), Positives = 51/108 (47%)
 Frame = +1

Query: 160 VDINQMPEAPQRGSHHRRAFSETFFRXXXXXXXXXXXXXXXXXATTEAVAINCSATATRD 339
           VDI QMPE P RGSHHRRA S+T FR                           + T T  
Sbjct: 14  VDIEQMPETPYRGSHHRRAHSDTSFRFDDLLFLDASDFDLSSLDDLPTPNTTTTTTTTTH 73

Query: 340 NQLDVPMTFDSGKPEDSGRYIKNAGGRPPISHFRSLSVDASADFFEGL 483
                PM  DS   +DS    +N   + P++H RSLS+D  +DFF+GL
Sbjct: 74  PPPAAPMAVDS-LSDDSTSNGQNQKPK-PVNHLRSLSMD--SDFFDGL 117


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