BLASTX nr result
ID: Rheum21_contig00027013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00027013
(723 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 70 7e-10
emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera] 69 1e-09
emb|CBI17184.3| unnamed protein product [Vitis vinifera] 69 2e-09
ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containin... 69 2e-09
ref|XP_006587690.1| PREDICTED: zinc finger CCCH domain-containin... 63 8e-08
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin... 63 8e-08
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin... 63 8e-08
ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 63 1e-07
ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containin... 60 5e-07
emb|CBI28616.3| unnamed protein product [Vitis vinifera] 59 1e-06
ref|XP_006587687.1| PREDICTED: zinc finger CCCH domain-containin... 58 3e-06
ref|XP_006587689.1| PREDICTED: zinc finger CCCH domain-containin... 58 3e-06
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici... 58 3e-06
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 57 8e-06
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 70.1 bits (170), Expect = 7e-10
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 33/183 (18%)
Frame = +1
Query: 4 VDLKNHH---YQHDFSDGSP-PHPADNHGTSLNQNIPPTTNVFPEDALEGNQGSP----- 156
+D K+H+ Y H S GSP P P +H + I P + ED E N GSP
Sbjct: 518 LDFKDHNHPQYHHGLSTGSPMPSPTVSHTPNNQALIFPADGIDQEDP-EENGGSPVTVIS 576
Query: 157 ---TASPTKEPQEIVTA----DSAGSNGIKKD-----DSDI--KLSNDVLGSPSASPTKS 294
TA+ K+ +E+ + G++ K++ +SD+ L + + + ASP KS
Sbjct: 577 KLATANADKQLEEVNPGCNHINETGNSNTKEEKANTEESDLPESLEHILPDNLFASPKKS 636
Query: 295 AAVDLSILAPKSVKVGNGVTISTSTAT----------TLNMAPPKSCLLEIPRFSSEHGA 444
A L++ + SV+ N T T++ + +LNMA KSC L++PR+SS HG
Sbjct: 637 AGDHLTVFSANSVEADNKTTSPTTSCSNSNPSLANTSSLNMASLKSCFLQMPRYSSGHGT 696
Query: 445 IGM 453
IGM
Sbjct: 697 IGM 699
>emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
Length = 697
Score = 69.3 bits (168), Expect = 1e-09
Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Frame = +1
Query: 4 VDLKNH-----HYQHDFSDGSPPHPADNHGTSLNQNIPPTTNVFPEDALEGNQGSP--TA 162
+DLKNH H+ H+ S G+P NQ++ ++ ++ E N SP T
Sbjct: 516 LDLKNHQHQHQHHLHNLSGGAPVASPXQSSIHNNQSLGLPSDGNNQEVXEENSSSPAATT 575
Query: 163 SPTKEPQEIV-----------TADSAGSNGIKKD----DSDI--KLSNDVLGSPSASPTK 291
SPT + + + + +G+N ++ D D+ L + + S ASPTK
Sbjct: 576 SPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILPDSLFASPTK 635
Query: 292 SAAVDLSILAPKSVKVGNGVTISTSTA---------TTLNMAPPKSCLLEIPRFSSEHGA 444
SA D S+ + S V TIS + A TTLNMA KSC E+PRF S HGA
Sbjct: 636 SAG-DRSVFSTASASVDESTTISITPASNNNPVLPGTTLNMASLKSCFFEMPRFPSGHGA 694
Query: 445 IGM 453
I M
Sbjct: 695 IEM 697
>emb|CBI17184.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 68.9 bits (167), Expect = 2e-09
Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Frame = +1
Query: 4 VDLKNH-----HYQHDFSDGSPPHPADNHGTSLNQNIPPTTNVFPEDALEGNQGSP--TA 162
+DLKNH H+ H+ S G+P NQ++ ++ ++ E N SP T
Sbjct: 434 LDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQEVPEENSSSPAATT 493
Query: 163 SPTKEPQEIV-----------TADSAGSNGIKKD----DSDI--KLSNDVLGSPSASPTK 291
SPT + + + + +G+N ++ D D+ L + + S ASPTK
Sbjct: 494 SPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILPDSLFASPTK 553
Query: 292 SAAVDLSILAPKSVKVGNGVTISTSTA---------TTLNMAPPKSCLLEIPRFSSEHGA 444
SA D S+ + S V TIS + A TTLNMA KSC E+PRF S HGA
Sbjct: 554 SAG-DRSVFSTASASVDESTTISITPASNNNPVLPGTTLNMASLKSCFFEMPRFPSGHGA 612
Query: 445 IGM 453
I M
Sbjct: 613 IEM 615
>ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like [Vitis
vinifera]
Length = 695
Score = 68.9 bits (167), Expect = 2e-09
Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Frame = +1
Query: 4 VDLKNH-----HYQHDFSDGSPPHPADNHGTSLNQNIPPTTNVFPEDALEGNQGSP--TA 162
+DLKNH H+ H+ S G+P NQ++ ++ ++ E N SP T
Sbjct: 514 LDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQEVPEENSSSPAATT 573
Query: 163 SPTKEPQEIV-----------TADSAGSNGIKKD----DSDI--KLSNDVLGSPSASPTK 291
SPT + + + + +G+N ++ D D+ L + + S ASPTK
Sbjct: 574 SPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILPDSLFASPTK 633
Query: 292 SAAVDLSILAPKSVKVGNGVTISTSTA---------TTLNMAPPKSCLLEIPRFSSEHGA 444
SA D S+ + S V TIS + A TTLNMA KSC E+PRF S HGA
Sbjct: 634 SAG-DRSVFSTASASVDESTTISITPASNNNPVLPGTTLNMASLKSCFFEMPRFPSGHGA 692
Query: 445 IGM 453
I M
Sbjct: 693 IEM 695
>ref|XP_006587690.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform
X2 [Glycine max]
Length = 698
Score = 63.2 bits (152), Expect = 8e-08
Identities = 62/185 (33%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPPHPADNHGTSL-NQNIPPTTNVFPEDALEGNQGSPTASPT--- 171
+D+K HH Q S GSP P+ H ++ NQNI P+ ++ E E S AS
Sbjct: 507 LDIKKHH-QRALSTGSPI-PSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASVS 564
Query: 172 --KEPQEIVTADSA---GSNGIKK---------DDSDIK--LSNDVLGSPSASPTKSAAV 303
++P I G NG K+ DD D++ L +++ SP ASPTK AAV
Sbjct: 565 AGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTK-AAV 623
Query: 304 DLSILAP---------------KSVKVGNGVTISTSTATTLNMAPPKSCLLEIPRFSSEH 438
+AP SV G + A+ L+M KS +IPRFSS H
Sbjct: 624 PGDFMAPFSNGPNVAIDTDASAASVNFKFGTSTLLPAASPLDMGTFKSYNCQIPRFSSGH 683
Query: 439 GAIGM 453
G IGM
Sbjct: 684 GTIGM 688
>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform
X1 [Solanum tuberosum]
Length = 701
Score = 63.2 bits (152), Expect = 8e-08
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 32/182 (17%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPP----------HPADNHG-----TSLNQNIPPTTNVFPEDALE 138
+DLKN H F P H +NH ++Q +P +N D E
Sbjct: 524 LDLKNQHRNDHFPPSLSPGLPMASQMQFHSQNNHNIVPVLNDIDQEVPSESN----DTHE 579
Query: 139 GNQGSPTASPTKEPQEIVTADSAGSNGIKKDDSDIKLSN-------DVLGSPSASPTKSA 297
+ A+ K PQE++ D ++ K+ ++I SN + + ASPTKSA
Sbjct: 580 VTKAPHNAADEKVPQEMLPTDFGNASSSKEHTTNIDNSNLQESLEHILPDNLFASPTKSA 639
Query: 298 AVDLSILAPKSVKVGNGVTISTSTA----------TTLNMAPPKSCLLEIPRFSSEHGAI 447
A + + + S + G I+T+T+ TTLNMA KSC +PRF+S AI
Sbjct: 640 AENQAAFSTDSAEAGISSPITTATSNNNIPMLPTTTTLNMASLKSCYFHMPRFTSGQEAI 699
Query: 448 GM 453
M
Sbjct: 700 EM 701
>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform
X1 [Glycine max]
Length = 696
Score = 63.2 bits (152), Expect = 8e-08
Identities = 62/185 (33%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPPHPADNHGTSL-NQNIPPTTNVFPEDALEGNQGSPTASPT--- 171
+D+K HH Q S GSP P+ H ++ NQNI P+ ++ E E S AS
Sbjct: 505 LDIKKHH-QRALSTGSPI-PSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASVS 562
Query: 172 --KEPQEIVTADSA---GSNGIKK---------DDSDIK--LSNDVLGSPSASPTKSAAV 303
++P I G NG K+ DD D++ L +++ SP ASPTK AAV
Sbjct: 563 AGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTK-AAV 621
Query: 304 DLSILAP---------------KSVKVGNGVTISTSTATTLNMAPPKSCLLEIPRFSSEH 438
+AP SV G + A+ L+M KS +IPRFSS H
Sbjct: 622 PGDFMAPFSNGPNVAIDTDASAASVNFKFGTSTLLPAASPLDMGTFKSYNCQIPRFSSGH 681
Query: 439 GAIGM 453
G IGM
Sbjct: 682 GTIGM 686
>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus trichocarpa]
gi|550331093|gb|EEE87307.2| hypothetical protein
POPTR_0009s05520g, partial [Populus trichocarpa]
Length = 728
Score = 62.8 bits (151), Expect = 1e-07
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Frame = +1
Query: 4 VDLKNHH---YQHDFSDGSP-PHPADNHGTSLNQNIPPTTNVFPEDALEGNQGSPTASPT 171
+DLKNH Y H S GSP P P H + P + E N +P A+
Sbjct: 550 LDLKNHRQHRYFHGLSTGSPLPSPTILHSPNNQTLFFPIDGIDKEVQHAENGSNPDAAAA 609
Query: 172 KEP-----QEIVTA----DSAGSNGIKK-----DDSDIK--LSNDVLGSPSASPTKSAAV 303
+ QE+ A D G+N K+ D+SD+ L + + + SP KSA
Sbjct: 610 QNAVADADQEVSPACNHNDGNGNNRDKEEKSNSDESDLNENLEHILPDNLFGSPKKSAGD 669
Query: 304 DLSILAPKSVKVG-NGVTISTST--------ATTLNMAPPKSCLLEIPRFSSEHGAIGM 453
+L++ + SV+V N +++TS+ T+LNM KSC L++PR SS HG +G+
Sbjct: 670 NLTVFSTASVEVDDNSSSLTTSSPNSNPLVPTTSLNMTSLKSCFLQMPRLSSGHGTVGI 728
>ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like isoform
1 [Solanum lycopersicum]
Length = 697
Score = 60.5 bits (145), Expect = 5e-07
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 32/182 (17%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPP----------HPADNHG-----TSLNQNIPPTTNVFPEDALE 138
+DLKN H F P H +NH ++Q +P +N + E
Sbjct: 520 LDLKNQHRNDHFPPSLSPGLPTASQMQFHSPNNHNLVPVLNDIDQEVPAESN----NTHE 575
Query: 139 GNQGSPTASPTKEPQEIVTADSAGSNGIKKDDSDIKLSN-------DVLGSPSASPTKSA 297
A+ K PQE++ D + K+ S+I SN + + ASPTKSA
Sbjct: 576 ATNAPHNAADEKVPQEMLPTDFGHGSSSKEQRSNIDNSNLQESFEHILPDNLFASPTKSA 635
Query: 298 AVDLSILAPKSVKVGNGVTISTSTA----------TTLNMAPPKSCLLEIPRFSSEHGAI 447
A + + + S + G I+T+T+ TTLNMA KSC PRF+S AI
Sbjct: 636 AENQAAFSTDSAEAGVSSPITTATSNNNIPMLPTTTTLNMASLKSCYFHRPRFTSGQEAI 695
Query: 448 GM 453
M
Sbjct: 696 EM 697
>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 59.3 bits (142), Expect = 1e-06
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 36/182 (19%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPPHPADNHGTSL-NQNIPPTTNVFPEDALEGNQGSP-TASPT-- 171
+D+K + S G+P P+ H S NQ + ++ +A E N SP TA P
Sbjct: 437 LDVKKQQHHRALSTGAPI-PSPTHSPSFFNQPLILPSDRSSPEAPEENCSSPATAIPVNA 495
Query: 172 ----KEPQEIVTA------------DSAGSNGIKKDDSDI--KLSNDVLGSPSASPTKSA 297
++ Q + TA + G +DSD+ L +++ SP ASPTK A
Sbjct: 496 VAAEQQQQTVTTAAEKEFTGIDENGNGTGKESSHNEDSDLPESLEHNLPDSPFASPTKGA 555
Query: 298 AVDLSILAPKSVKVGNGVTISTSTA--------------TTLNMAPPKSCLLEIPRFSSE 435
LS + S +V T+S S A +TL+MA KSC ++PRFSS
Sbjct: 556 GEYLSTFSNASSEVEKNTTVSGSPAVNGNLITSSLLPATSTLDMASFKSCYFQMPRFSSG 615
Query: 436 HG 441
HG
Sbjct: 616 HG 617
>ref|XP_006587687.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform
X1 [Glycine max] gi|571478851|ref|XP_006587688.1|
PREDICTED: zinc finger CCCH domain-containing protein
53-like isoform X2 [Glycine max]
Length = 702
Score = 58.2 bits (139), Expect = 3e-06
Identities = 60/183 (32%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPPHPADNHGTSL-NQNIPPTTNVFPEDALEGNQGSPTASPT--- 171
+D+K HH Q S GSP P+ H ++ NQNI P+ ++ E E S AS
Sbjct: 513 LDIKKHH-QRALSTGSPI-PSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASVS 570
Query: 172 --KEPQEIVTADSA---GSNGIKK---------DDSDIK--LSNDVLGSPSASPTKSAAV 303
++P I G NG K+ DD D++ L +++ SP ASPTK
Sbjct: 571 AGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTKGDG- 629
Query: 304 DLSILAPKSVKVGNGVTIS---------TST----ATTLNMAPPKSCLLEIPRFSSEHGA 444
D + N S TST A+ L+M KS +IPRFSS HG
Sbjct: 630 DFLVAFSNGPNEANDADASAASANSKFGTSTLLPAASALDMGTFKSFNCQIPRFSSGHGT 689
Query: 445 IGM 453
IGM
Sbjct: 690 IGM 692
>ref|XP_006587689.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform
X3 [Glycine max]
Length = 700
Score = 58.2 bits (139), Expect = 3e-06
Identities = 60/183 (32%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPPHPADNHGTSL-NQNIPPTTNVFPEDALEGNQGSPTASPT--- 171
+D+K HH Q S GSP P+ H ++ NQNI P+ ++ E E S AS
Sbjct: 511 LDIKKHH-QRALSTGSPI-PSPTHSPNMFNQNIVPSFHINSESPKESGSTSAPASTASVS 568
Query: 172 --KEPQEIVTADSA---GSNGIKK---------DDSDIK--LSNDVLGSPSASPTKSAAV 303
++P I G NG K+ DD D++ L +++ SP ASPTK
Sbjct: 569 AGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDDCDLQECLEHNLPDSPFASPTKGDG- 627
Query: 304 DLSILAPKSVKVGNGVTIS---------TST----ATTLNMAPPKSCLLEIPRFSSEHGA 444
D + N S TST A+ L+M KS +IPRFSS HG
Sbjct: 628 DFLVAFSNGPNEANDADASAASANSKFGTSTLLPAASALDMGTFKSFNCQIPRFSSGHGT 687
Query: 445 IGM 453
IGM
Sbjct: 688 IGM 690
>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547433|gb|EEF48928.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 700
Score = 58.2 bits (139), Expect = 3e-06
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Frame = +1
Query: 4 VDLKNH-HYQ--HDFSDGSP-----PHPADNHGT------SLNQNIPPTTNVFPEDALEG 141
+D KNH H+Q H S GSP P N T ++Q +P P+
Sbjct: 523 LDFKNHNHHQFLHGLSTGSPVPSPTPSRTPNSQTLIFQPDGIDQEVPEENGGIPDAVASR 582
Query: 142 N---QGSPTASPTKEPQEIVTADSAGSNGIKKDDSDIKLSND-VLGSPSASPTKSAAVDL 309
N G +P + +S+ +++D++ S + +L + K +A D
Sbjct: 583 NGVADGELEVNPVSNHSNGNSYNSSTEEKSSTEENDLRESLEHILPDNLFTSPKKSAGDN 642
Query: 310 SILAPKSVKVG-NGVTISTS---------TATTLNMAPPKSCLLEIPRFSSEHGAIGM 453
++ + +++V N +T +TS T +TLNM K+C L+IPRFSS HG IGM
Sbjct: 643 TVFSTTALEVDDNAITSTTSSSNSNLVLPTTSTLNMTSLKTCFLQIPRFSSGHGTIGM 700
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform
X2 [Solanum tuberosum]
Length = 695
Score = 56.6 bits (135), Expect = 8e-06
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 32/176 (18%)
Frame = +1
Query: 4 VDLKNHHYQHDFSDGSPP----------HPADNHG-----TSLNQNIPPTTNVFPEDALE 138
+DLKN H F P H +NH ++Q +P +N D E
Sbjct: 524 LDLKNQHRNDHFPPSLSPGLPMASQMQFHSQNNHNIVPVLNDIDQEVPSESN----DTHE 579
Query: 139 GNQGSPTASPTKEPQEIVTADSAGSNGIKKDDSDIKLSN-------DVLGSPSASPTKSA 297
+ A+ K PQE++ D ++ K+ ++I SN + + ASPTKSA
Sbjct: 580 VTKAPHNAADEKVPQEMLPTDFGNASSSKEHTTNIDNSNLQESLEHILPDNLFASPTKSA 639
Query: 298 AVDLSILAPKSVKVGNGVTISTSTA----------TTLNMAPPKSCLLEIPRFSSE 435
A + + + S + G I+T+T+ TTLNMA KSC +PR + E
Sbjct: 640 AENQAAFSTDSAEAGISSPITTATSNNNIPMLPTTTTLNMASLKSCYFHMPRKTFE 695