BLASTX nr result
ID: Rheum21_contig00026972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026972
(266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006493043.1| PREDICTED: uncharacterized protein LOC102611... 109 3e-22
ref|XP_006491719.1| PREDICTED: uncharacterized protein LOC102621... 107 2e-21
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 99 5e-19
gb|ABG37671.1| integrase [Populus trichocarpa] 99 6e-19
emb|CAN60970.1| hypothetical protein VITISV_026408 [Vitis vinifera] 96 5e-18
emb|CAN77865.1| hypothetical protein VITISV_032367 [Vitis vinifera] 95 1e-17
emb|CAN78232.1| hypothetical protein VITISV_027465 [Vitis vinifera] 93 3e-17
ref|XP_003633925.1| PREDICTED: uncharacterized protein LOC100854... 93 4e-17
ref|XP_002267011.2| PREDICTED: uncharacterized protein LOC100265... 93 4e-17
emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera] 93 4e-17
emb|CAN68847.1| hypothetical protein VITISV_007652 [Vitis vinifera] 93 4e-17
emb|CAN65719.1| hypothetical protein VITISV_020846 [Vitis vinifera] 93 4e-17
ref|XP_006830101.1| hypothetical protein AMTR_s04594p00005750, p... 92 7e-17
emb|CAN62321.1| hypothetical protein VITISV_018461 [Vitis vinifera] 92 7e-17
emb|CAN75508.1| hypothetical protein VITISV_037947 [Vitis vinifera] 89 6e-16
emb|CAN66653.1| hypothetical protein VITISV_014606 [Vitis vinifera] 89 8e-16
emb|CAN83648.1| hypothetical protein VITISV_003421 [Vitis vinifera] 88 1e-15
emb|CAN64144.1| hypothetical protein VITISV_018502 [Vitis vinifera] 88 1e-15
emb|CAN72822.1| hypothetical protein VITISV_008448 [Vitis vinifera] 87 2e-15
emb|CAN81973.1| hypothetical protein VITISV_039218 [Vitis vinifera] 87 2e-15
>ref|XP_006493043.1| PREDICTED: uncharacterized protein LOC102611356 [Citrus sinensis]
Length = 1121
Score = 109 bits (273), Expect = 3e-22
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = +1
Query: 46 REKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARK 225
R K + + + WDDPYL+++C +++IRRC+PDN++QSVISFCH QACG HF A KTA K
Sbjct: 519 RTKFLSKAKDFFWDDPYLFKYCADQIIRRCVPDNEIQSVISFCHEQACGGHFSAKKTATK 578
Query: 226 VLDAGFYWPQIF 261
+L GFYWP +F
Sbjct: 579 ILQCGFYWPTLF 590
Score = 109 bits (273), Expect = 3e-22
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = +1
Query: 46 REKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARK 225
R K + + + WDDPYL+++C +++IRRC+PDN++QSVISFCH QACG HF A KTA K
Sbjct: 882 RTKFLSKVKDFFWDDPYLFKYCADQIIRRCVPDNEIQSVISFCHEQACGGHFSAKKTATK 941
Query: 226 VLDAGFYWPQIF 261
+L GFYWP +F
Sbjct: 942 ILQCGFYWPTLF 953
>ref|XP_006491719.1| PREDICTED: uncharacterized protein LOC102621073 [Citrus sinensis]
Length = 284
Score = 107 bits (267), Expect = 2e-21
Identities = 37/74 (50%), Positives = 59/74 (79%)
Frame = +1
Query: 43 RREKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTAR 222
+++K++ + ++Y+WDDPYLW+HC ++VIRRC+ + ++ S++ FCHS ACG HFG +TA
Sbjct: 135 KKDKIKSDAKYYVWDDPYLWKHCFDQVIRRCVFEFEIPSILQFCHSYACGGHFGPKRTAS 194
Query: 223 KVLDAGFYWPQIFR 264
KVL+ G +WP +FR
Sbjct: 195 KVLECGLFWPTLFR 208
>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 99.4 bits (246), Expect = 5e-19
Identities = 36/73 (49%), Positives = 54/73 (73%)
Frame = +1
Query: 46 REKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARK 225
R + + +++ WDDPYL+++C +++ RRC+P + +SV+SFCH QACG HFG KTA K
Sbjct: 1316 RSRFLSQVKYFYWDDPYLFKYCPDQIFRRCVPTEETRSVLSFCHEQACGGHFGPRKTAEK 1375
Query: 226 VLDAGFYWPQIFR 264
VL +G YWP +F+
Sbjct: 1376 VLQSGLYWPTLFK 1388
>gb|ABG37671.1| integrase [Populus trichocarpa]
Length = 1332
Score = 99.0 bits (245), Expect = 6e-19
Identities = 36/73 (49%), Positives = 55/73 (75%)
Frame = +1
Query: 46 REKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARK 225
+ K + +++ WDDPYL+++ +++ RRC+PDN+V SVI FCHS+ACG HF + KT K
Sbjct: 789 KRKFLNKVKNFYWDDPYLFKYYPDQIFRRCIPDNEVSSVIKFCHSEACGGHFSSRKTTAK 848
Query: 226 VLDAGFYWPQIFR 264
+L +GFYWP +F+
Sbjct: 849 ILQSGFYWPTMFK 861
>emb|CAN60970.1| hypothetical protein VITISV_026408 [Vitis vinifera]
Length = 1354
Score = 95.9 bits (237), Expect = 5e-18
Identities = 36/74 (48%), Positives = 55/74 (74%)
Frame = +1
Query: 43 RREKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTAR 222
RR+K + ++YIWDD +L++ C N++IRRC+P +++S++ CHS+ G HFGA K A
Sbjct: 780 RRKKFFSDLKYYIWDDHFLFKQCANQIIRRCVPKEEMESILHHCHSREVGGHFGATKIAA 839
Query: 223 KVLDAGFYWPQIFR 264
KVL +GFYWP +F+
Sbjct: 840 KVLQSGFYWPSLFK 853
>emb|CAN77865.1| hypothetical protein VITISV_032367 [Vitis vinifera]
Length = 624
Score = 94.7 bits (234), Expect = 1e-17
Identities = 36/74 (48%), Positives = 55/74 (74%)
Frame = +1
Query: 43 RREKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTAR 222
RR+K + ++YIWDDP+L++ CV ++IRRC+ + + +S++ CHS+ G HFGA KT
Sbjct: 331 RRKKFFLDLKYYIWDDPFLYKKCVYQIIRRCVLEEETESIMHHCHSREVGGHFGATKTTA 390
Query: 223 KVLDAGFYWPQIFR 264
KVL +GFYWP +F+
Sbjct: 391 KVLQSGFYWPSLFK 404
>emb|CAN78232.1| hypothetical protein VITISV_027465 [Vitis vinifera]
Length = 1629
Score = 93.2 bits (230), Expect = 3e-17
Identities = 31/67 (46%), Positives = 51/67 (76%)
Frame = +1
Query: 64 ETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGF 243
+ +HY WDDPYL++ C ++++RRC+P+++ Q ++ CH ACG HF + KT+ K+L +GF
Sbjct: 1103 QAKHYAWDDPYLYKFCPDQIMRRCVPEDEQQDILRMCHEGACGGHFASRKTSAKILHSGF 1162
Query: 244 YWPQIFR 264
YWP +F+
Sbjct: 1163 YWPTMFK 1169
>ref|XP_003633925.1| PREDICTED: uncharacterized protein LOC100854171 [Vitis vinifera]
Length = 1227
Score = 92.8 bits (229), Expect = 4e-17
Identities = 31/65 (47%), Positives = 50/65 (76%)
Frame = +1
Query: 70 RHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYW 249
+HY WDDPYL++ C ++++RRC+P+++ Q ++ CH ACG HF + KT+ K+L +GFYW
Sbjct: 827 KHYAWDDPYLYKFCPDQIMRRCVPEDEQQDILRMCHEGACGGHFASRKTSAKILQSGFYW 886
Query: 250 PQIFR 264
P +F+
Sbjct: 887 PTMFK 891
>ref|XP_002267011.2| PREDICTED: uncharacterized protein LOC100265215 [Vitis vinifera]
Length = 1262
Score = 92.8 bits (229), Expect = 4e-17
Identities = 31/65 (47%), Positives = 50/65 (76%)
Frame = +1
Query: 70 RHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYW 249
+HY WDDPYL++ C ++++RRC+P+++ Q ++ CH ACG HF + KT+ K+L +GFYW
Sbjct: 862 KHYAWDDPYLYKFCPDQIMRRCVPEDEQQDILRMCHEGACGGHFASRKTSAKILQSGFYW 921
Query: 250 PQIFR 264
P +F+
Sbjct: 922 PTMFK 926
>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
Length = 2377
Score = 92.8 bits (229), Expect = 4e-17
Identities = 31/65 (47%), Positives = 50/65 (76%)
Frame = +1
Query: 70 RHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYW 249
+HY WDDPYL++ C ++++RRC+P+++ Q ++ CH ACG HF + KT+ K+L +GFYW
Sbjct: 1350 KHYAWDDPYLYKFCPDQIMRRCVPEDEQQDILRMCHEGACGGHFASRKTSAKILQSGFYW 1409
Query: 250 PQIFR 264
P +F+
Sbjct: 1410 PTMFK 1414
>emb|CAN68847.1| hypothetical protein VITISV_007652 [Vitis vinifera]
Length = 1551
Score = 92.8 bits (229), Expect = 4e-17
Identities = 31/65 (47%), Positives = 50/65 (76%)
Frame = +1
Query: 70 RHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYW 249
+HY WDDPYL++ C ++++RRC+P+++ Q ++ CH ACG HF + KT+ K+L +GFYW
Sbjct: 1188 KHYAWDDPYLYKFCPDQIMRRCVPEDEQQDILRMCHEGACGGHFASRKTSAKILQSGFYW 1247
Query: 250 PQIFR 264
P +F+
Sbjct: 1248 PTMFK 1252
>emb|CAN65719.1| hypothetical protein VITISV_020846 [Vitis vinifera]
Length = 1791
Score = 92.8 bits (229), Expect = 4e-17
Identities = 31/65 (47%), Positives = 50/65 (76%)
Frame = +1
Query: 70 RHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYW 249
+HY WDDPYL++ C ++++RRC+P+++ Q ++ CH ACG HF + KT+ K+L +GFYW
Sbjct: 1391 KHYAWDDPYLYKFCPDQIMRRCVPEDEQQDILRMCHEGACGGHFASRKTSAKILQSGFYW 1450
Query: 250 PQIFR 264
P +F+
Sbjct: 1451 PTMFK 1455
>ref|XP_006830101.1| hypothetical protein AMTR_s04594p00005750, partial [Amborella
trichopoda] gi|548835933|gb|ERM97517.1| hypothetical
protein AMTR_s04594p00005750, partial [Amborella
trichopoda]
Length = 215
Score = 92.0 bits (227), Expect = 7e-17
Identities = 31/72 (43%), Positives = 53/72 (73%)
Frame = +1
Query: 49 EKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKV 228
+K E +HY W++P L++HC +++IRRC+P+ ++ S+++ CH+ CG HF +TA KV
Sbjct: 27 KKFFSEVKHYYWEEPILYKHCADQIIRRCVPEEEMYSILNHCHALPCGGHFSGTRTAAKV 86
Query: 229 LDAGFYWPQIFR 264
L +GF+WP +F+
Sbjct: 87 LQSGFFWPTLFK 98
>emb|CAN62321.1| hypothetical protein VITISV_018461 [Vitis vinifera]
Length = 623
Score = 92.0 bits (227), Expect = 7e-17
Identities = 32/60 (53%), Positives = 49/60 (81%)
Frame = +1
Query: 46 REKVRRETRHYIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARK 225
R+ ++ + ++Y+WDDPYLW+HC NRVIR+C+ +N++ +++FCHS ACG HFGA + ARK
Sbjct: 408 RDTIKSDAKYYVWDDPYLWKHCANRVIRKCILENEIIYILTFCHSYACGDHFGAKRMARK 467
>emb|CAN75508.1| hypothetical protein VITISV_037947 [Vitis vinifera]
Length = 1705
Score = 89.0 bits (219), Expect = 6e-16
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 10/97 (10%)
Frame = +1
Query: 4 TTWFA--------GNSPQIIPRREKVR--RETRHYIWDDPYLWRHCVNRVIRRCLPDNDV 153
T W+A G SP ++++ + Y W++P+L+++CV+++IR+C+P+++
Sbjct: 852 TPWYAHIANYLVTGESPSEWNAQDRMHFFAKIHAYYWEEPFLFKYCVDQIIRKCVPEDEQ 911
Query: 154 QSVISFCHSQACGAHFGANKTARKVLDAGFYWPQIFR 264
Q ++S CH ACG HF + KTA KVL +GF WP +F+
Sbjct: 912 QGILSHCHENACGGHFASQKTAMKVLQSGFTWPSLFK 948
>emb|CAN66653.1| hypothetical protein VITISV_014606 [Vitis vinifera]
Length = 1661
Score = 88.6 bits (218), Expect = 8e-16
Identities = 30/63 (47%), Positives = 50/63 (79%)
Frame = +1
Query: 76 YIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYWPQ 255
Y W++P+L+++CV+++IR+C+P+++ Q ++S CH ACG HF + KTA KVL +GF WP
Sbjct: 1276 YYWEEPFLFKYCVDQIIRKCVPEDEQQGILSHCHENACGGHFASQKTAMKVLQSGFTWPS 1335
Query: 256 IFR 264
+F+
Sbjct: 1336 LFK 1338
>emb|CAN83648.1| hypothetical protein VITISV_003421 [Vitis vinifera]
Length = 1924
Score = 87.8 bits (216), Expect = 1e-15
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
Frame = +1
Query: 37 IPRREKVRRETRH-------YIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGA 195
+PR KV+ + +H Y W++P+L+++C +++IR+C+P+ + Q ++S CH ACG
Sbjct: 1509 VPREWKVQ-DRKHFFAKIHAYYWEEPFLFKYCADQIIRKCVPEEEQQEILSHCHENACGG 1567
Query: 196 HFGANKTARKVLDAGFYWPQIFR 264
HF + KTA KVL +GF WP +F+
Sbjct: 1568 HFASQKTAMKVLQSGFTWPSLFK 1590
>emb|CAN64144.1| hypothetical protein VITISV_018502 [Vitis vinifera]
Length = 1112
Score = 87.8 bits (216), Expect = 1e-15
Identities = 29/63 (46%), Positives = 49/63 (77%)
Frame = +1
Query: 76 YIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYWPQ 255
Y W++P+L+++C +++IR+C+P+++ Q ++S CH ACG HF + KTA KVL +GF WP
Sbjct: 728 YYWEEPFLFKYCADQIIRKCVPEBEQQXILSHCHENACGGHFASQKTAMKVLQSGFTWPS 787
Query: 256 IFR 264
+F+
Sbjct: 788 LFK 790
>emb|CAN72822.1| hypothetical protein VITISV_008448 [Vitis vinifera]
Length = 1700
Score = 87.4 bits (215), Expect = 2e-15
Identities = 29/63 (46%), Positives = 50/63 (79%)
Frame = +1
Query: 76 YIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYWPQ 255
Y W++P+L+++CV+++IR+C+P+++ Q +++ CH ACG HF + KTA KVL +GF WP
Sbjct: 1383 YYWEEPFLFKYCVDQIIRKCVPEDEQQGILNHCHENACGGHFASQKTAMKVLQSGFTWPS 1442
Query: 256 IFR 264
+F+
Sbjct: 1443 LFK 1445
>emb|CAN81973.1| hypothetical protein VITISV_039218 [Vitis vinifera]
Length = 2254
Score = 87.0 bits (214), Expect = 2e-15
Identities = 29/63 (46%), Positives = 49/63 (77%)
Frame = +1
Query: 76 YIWDDPYLWRHCVNRVIRRCLPDNDVQSVISFCHSQACGAHFGANKTARKVLDAGFYWPQ 255
Y W++P+L+++C +++IR+C+P+++ Q ++S CH ACG HF + KTA KVL +GF WP
Sbjct: 1351 YYWEEPFLFKYCADQIIRKCVPEDEQQGILSHCHENACGGHFASQKTAMKVLQSGFTWPS 1410
Query: 256 IFR 264
+F+
Sbjct: 1411 LFK 1413