BLASTX nr result

ID: Rheum21_contig00026826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00026826
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251...    62   1e-07
ref|XP_004238497.1| PREDICTED: uncharacterized protein LOC101255...    62   1e-07
ref|XP_004248044.1| PREDICTED: uncharacterized protein LOC101249...    61   2e-07
emb|CAN77273.1| hypothetical protein VITISV_018552 [Vitis vinifera]    60   2e-07
emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera]    60   4e-07
ref|XP_006367210.1| PREDICTED: uncharacterized protein LOC102586...    59   5e-07
ref|XP_004243863.1| PREDICTED: uncharacterized protein LOC101259...    59   9e-07
ref|XP_004229082.1| PREDICTED: uncharacterized protein LOC101247...    57   2e-06
emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]    57   3e-06
gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposo...    57   3e-06
emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]    56   6e-06
emb|CAN62020.1| hypothetical protein VITISV_019562 [Vitis vinifera]    55   1e-05

>ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251909 [Solanum
           lycopersicum]
          Length = 648

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKG--RYANWKGKSVANVE-------------TEDAH 140
           C+FCH KGH ++TCY+++GYP K  G   YAN    S +N                E ++
Sbjct: 315 CEFCHYKGHTKETCYKLHGYPKKKGGVSSYAN-NAASASNESGMIDSTSSSNARINESSN 373

Query: 141 DTPLDSPVKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMN--------VS 296
           DT L   V        F      E+ +M + G S   + + N+A + V          +S
Sbjct: 374 DTSLGQGVS------MFTQEQYYEILQMLRKGKSKEVDTMANVATAGVSGTSGKITALMS 427

Query: 297 SPHLVSWIVDTGATDH 344
               ++WI+DTGA++H
Sbjct: 428 DMSQINWIIDTGASNH 443


>ref|XP_004238497.1| PREDICTED: uncharacterized protein LOC101255989 [Solanum
           lycopersicum]
          Length = 587

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKG--RYAN----------WKGKSVANVET-EDAHDT 146
           C+FCH KGH ++TCY+++GYP K  G   YAN              S +N  T E ++DT
Sbjct: 235 CEFCHFKGHTKETCYKLHGYPKKKGGVSSYANNASTGNESGIIDSTSSSNTRTNESSNDT 294

Query: 147 PLDSPVKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMNVSSPHL------ 308
            L   V        F      E+ +M + G S   + + N+A + V   S          
Sbjct: 295 SLGQGVS------MFTQEQYYEILQMLRKGKSKEVDTMANVATAGVSGTSGNFTALMFDI 348

Query: 309 --VSWIVDTGATDH 344
              +WI+DTGA++H
Sbjct: 349 SHTNWIIDTGASNH 362


>ref|XP_004248044.1| PREDICTED: uncharacterized protein LOC101249767 [Solanum
           lycopersicum]
          Length = 652

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKG--RYAN-----------WKGKSVANVET-EDAHD 143
           C+FCH KGH ++TCY ++GYP K  G   YAN               S +N  T E ++D
Sbjct: 315 CEFCHYKGHTKETCYNLHGYPKKKGGVSSYANNAASAKNESGMVDSTSRSNTRTNESSND 374

Query: 144 TPLDSPVKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMN--------VSS 299
           T L   V        F      E+ +M + G +   + + N+A + V          +S 
Sbjct: 375 TTLGQGVS------MFTQEQYYEILQMLRKGKNKEVDTMANVATAAVSGTSGNVTALMSD 428

Query: 300 PHLVSWIVDTGATDH 344
              ++WI+DTGA++H
Sbjct: 429 MSHINWIIDTGASNH 443


>emb|CAN77273.1| hypothetical protein VITISV_018552 [Vitis vinifera]
          Length = 391

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185
           CD C K GH R+ C++I+       G+  +WK     N     AHD      V + K   
Sbjct: 164 CDHCRKLGHSRENCWKIH-------GKLVDWKPSKPFNDRESSAHDV----VVSKDKPTS 212

Query: 186 TFLNAVCKEMFKMF-----KDGASTSANFV---------GNLAHSYVMNVSSPHLVSWIV 323
           T  N   KE  +M      ++  S S+N           GN +++YV+N    HL  WI+
Sbjct: 213 TKTNPFTKEQLEMLQQLMSQNFLSQSSNLTSSTGMLAQKGNFSNAYVIN--KQHLNPWII 270

Query: 324 DTGATDH 344
           D+GA+DH
Sbjct: 271 DSGASDH 277


>emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera]
          Length = 994

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDK-GRYANWKGKSVANVETEDAHDTPLDSPVKEQKVD 182
           CD C + GH +DTC++I+G P   K  R+AN K +   N+ + D   +P  +P  +++++
Sbjct: 519 CDHCRRPGHTKDTCWKIHGKPTDWKPSRFANDK-EGQGNLVSMDEKPSPKPTPFSKEQIE 577

Query: 183 PTFLNAVCKEMFKMFKDGASTSANFVGNLAHS----YVMNVSSPHLVSWIVDTGATDH 344
                 V +++F       + +    G+LA        +NV    L  WI+D+GA+DH
Sbjct: 578 ------VLQKLFSQSLPAPTPTVVGTGSLAQKGNFLSALNVKKEKLSPWIIDSGASDH 629


>ref|XP_006367210.1| PREDICTED: uncharacterized protein LOC102586703 [Solanum tuberosum]
          Length = 284

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETED------AHDTPLDSPVK 167
           C  CHK G+L+D C+Q+ GYP       AN+KGK +AN  + D      ++D+    P  
Sbjct: 118 CTHCHKHGNLKDICFQLIGYP-------ANYKGKRLANNVSTDYGSIRSSYDSSCFVPST 170

Query: 168 EQ---------------KVDPTFLNAVCKEMFK-MFKDGASTSANFVGNLAHSYVMNVS- 296
           +Q               +  P   N V + + K +  +  +TS N   N A  +  N   
Sbjct: 171 KQSQQQYGSGFGAGSVPQFTPNQYNQVLQMLNKPLIHEETTTSTNINANAAGIFAGNSKF 230

Query: 297 SPHLVSWIVDTGATDH 344
           + +  +WIVD+GATDH
Sbjct: 231 NSYSFNWIVDSGATDH 246


>ref|XP_004243863.1| PREDICTED: uncharacterized protein LOC101259350 [Solanum
           lycopersicum]
          Length = 531

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3   RCDFCHKKGHLRDTCYQIYGYP----YKDKGRYANWKGKSVANVETEDAHDTPLDSPVKE 170
           +CD+C  +GH+   C++++GYP    +K KG      G +  N       ++ + S  + 
Sbjct: 217 KCDYCKNQGHIEANCFRLHGYPTDWKFKKKG-----TGNNAYNANNVQTDNSSMHSGARN 271

Query: 171 QKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMNVSSPHLVSWIVDTGATDH 344
               P+  +     +  M  DG +++AN + N+A    +NV     + WI+D+GAT+H
Sbjct: 272 PPRAPSLTDEQHDHIQHML-DGDTSTANVMANMAGMTHINVIKLTDLPWIIDSGATNH 328


>ref|XP_004229082.1| PREDICTED: uncharacterized protein LOC101247852 [Solanum
           lycopersicum]
          Length = 575

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
 Frame = +3

Query: 3   RCDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPL-------DSP 161
           +CD CHK GH++  C+++ GYP + KG+  +    ++   E+   H  P         + 
Sbjct: 263 KCDHCHKTGHVKLDCFKLIGYPSEFKGKRYSVVAGNLVYEESSIHHHAPQPTQKESHPAA 322

Query: 162 VKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLA-HSYVMNVSSPHLVSWIVDTGAT 338
             E    P F     +++ +M         + V N+A +SY+   +S   + W+VDTGAT
Sbjct: 323 ASEMMPMPMFTPQQHQKLIQMLNQTTVGDTHCVANMAGNSYLSKGTS---IQWVVDTGAT 379

Query: 339 DH 344
            H
Sbjct: 380 HH 381


>emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]
          Length = 1394

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185
           CD C K GH R+TC++I+G P   K R    K     +V T++    P  SP  +++++ 
Sbjct: 262 CDHCKKXGHSRETCWKIHGXPVDWKPRQPLEKEGRGNHVATDEQXPKPEASPFNKEQME- 320

Query: 186 TFLNAVCKEMFKMFKDGASTSANFVGN--LAHS----YVMNVSSPHLVSWIVDTGATDH 344
             L  +   +  +     S+S   +G+  LAH         V       WIVD+GA+DH
Sbjct: 321 -MLQKLLSPLLSVQSQXGSSSNQVIGSGTLAHKGNFLSAFTVGKKRKKPWIVDSGASDH 378


>gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 3263

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYP--YKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKV 179
           CD+C K GH ++ C++++G P  +K K R+       VA+    D+   P  SP  ++++
Sbjct: 271 CDYCKKLGHYKEACWKLHGKPADWKPKPRFDRDSKAHVAS--NSDSAPVPEPSPFNKEQM 328

Query: 180 DPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMNVSSPHLVSWIVDTGATDH 344
           +      V +++F     G  T A  V           +   +  WIVDTGA+DH
Sbjct: 329 N------VLQKLFSQVGSGNITGAGLVAQTDPHTAFTANHGGMRPWIVDTGASDH 377


>emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera]
          Length = 1210

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185
           C+ C K GH +DTC+ ++G P   K R  N      A+ +T+ A  TP  S +++     
Sbjct: 257 CEHCKKLGHTKDTCWTLHGKPANWKPRQPNKAHSHQASTKTQ-ADKTP--SEIRQSTSSE 313

Query: 186 TFLNAVCKEMFKMFKD----GASTSANFVGNLAHS---YVMNVSSPHLVSWIVDTGATDH 344
            F +    ++++ F +      S++    G+L H    ++   +  H+  WI+D+GA+DH
Sbjct: 314 DFNSBQLAKLYEFFSNFQASXQSSTTLSSGSLTHKDTFFIALSAMSHITPWIIDSGASDH 373


>emb|CAN62020.1| hypothetical protein VITISV_019562 [Vitis vinifera]
          Length = 544

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
 Frame = +3

Query: 6   CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185
           CD C K GH R+TC++I+G P   K R    K     +V T++    P  SP  +++++ 
Sbjct: 336 CDHCRKXGHSRETCWKIHGKPVDWKPRQPLEKEGRGNHVATDEQSXQPEASPFNKEQME- 394

Query: 186 TFLNAVCKEMFKMFKDGASTSANFVGN--LAHS----YVMNVSSPHLVSWIVDTGATDH 344
             L  +   +  +     S+S   +G+  LAH                 WIVD+GA+DH
Sbjct: 395 -MLQKLLSPLLSVQSQTGSSSNQVIGSGTLAHKGNFLSAFTAGKKRKKPWIVDSGASDH 452


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