BLASTX nr result
ID: Rheum21_contig00026826
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00026826 (346 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251... 62 1e-07 ref|XP_004238497.1| PREDICTED: uncharacterized protein LOC101255... 62 1e-07 ref|XP_004248044.1| PREDICTED: uncharacterized protein LOC101249... 61 2e-07 emb|CAN77273.1| hypothetical protein VITISV_018552 [Vitis vinifera] 60 2e-07 emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera] 60 4e-07 ref|XP_006367210.1| PREDICTED: uncharacterized protein LOC102586... 59 5e-07 ref|XP_004243863.1| PREDICTED: uncharacterized protein LOC101259... 59 9e-07 ref|XP_004229082.1| PREDICTED: uncharacterized protein LOC101247... 57 2e-06 emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera] 57 3e-06 gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposo... 57 3e-06 emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera] 56 6e-06 emb|CAN62020.1| hypothetical protein VITISV_019562 [Vitis vinifera] 55 1e-05 >ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251909 [Solanum lycopersicum] Length = 648 Score = 61.6 bits (148), Expect = 1e-07 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 23/136 (16%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKG--RYANWKGKSVANVE-------------TEDAH 140 C+FCH KGH ++TCY+++GYP K G YAN S +N E ++ Sbjct: 315 CEFCHYKGHTKETCYKLHGYPKKKGGVSSYAN-NAASASNESGMIDSTSSSNARINESSN 373 Query: 141 DTPLDSPVKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMN--------VS 296 DT L V F E+ +M + G S + + N+A + V +S Sbjct: 374 DTSLGQGVS------MFTQEQYYEILQMLRKGKSKEVDTMANVATAGVSGTSGKITALMS 427 Query: 297 SPHLVSWIVDTGATDH 344 ++WI+DTGA++H Sbjct: 428 DMSQINWIIDTGASNH 443 >ref|XP_004238497.1| PREDICTED: uncharacterized protein LOC101255989 [Solanum lycopersicum] Length = 587 Score = 61.6 bits (148), Expect = 1e-07 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 21/134 (15%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKG--RYAN----------WKGKSVANVET-EDAHDT 146 C+FCH KGH ++TCY+++GYP K G YAN S +N T E ++DT Sbjct: 235 CEFCHFKGHTKETCYKLHGYPKKKGGVSSYANNASTGNESGIIDSTSSSNTRTNESSNDT 294 Query: 147 PLDSPVKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMNVSSPHL------ 308 L V F E+ +M + G S + + N+A + V S Sbjct: 295 SLGQGVS------MFTQEQYYEILQMLRKGKSKEVDTMANVATAGVSGTSGNFTALMFDI 348 Query: 309 --VSWIVDTGATDH 344 +WI+DTGA++H Sbjct: 349 SHTNWIIDTGASNH 362 >ref|XP_004248044.1| PREDICTED: uncharacterized protein LOC101249767 [Solanum lycopersicum] Length = 652 Score = 60.8 bits (146), Expect = 2e-07 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 22/135 (16%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKG--RYAN-----------WKGKSVANVET-EDAHD 143 C+FCH KGH ++TCY ++GYP K G YAN S +N T E ++D Sbjct: 315 CEFCHYKGHTKETCYNLHGYPKKKGGVSSYANNAASAKNESGMVDSTSRSNTRTNESSND 374 Query: 144 TPLDSPVKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMN--------VSS 299 T L V F E+ +M + G + + + N+A + V +S Sbjct: 375 TTLGQGVS------MFTQEQYYEILQMLRKGKNKEVDTMANVATAAVSGTSGNVTALMSD 428 Query: 300 PHLVSWIVDTGATDH 344 ++WI+DTGA++H Sbjct: 429 MSHINWIIDTGASNH 443 >emb|CAN77273.1| hypothetical protein VITISV_018552 [Vitis vinifera] Length = 391 Score = 60.5 bits (145), Expect = 2e-07 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 14/127 (11%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185 CD C K GH R+ C++I+ G+ +WK N AHD V + K Sbjct: 164 CDHCRKLGHSRENCWKIH-------GKLVDWKPSKPFNDRESSAHDV----VVSKDKPTS 212 Query: 186 TFLNAVCKEMFKMF-----KDGASTSANFV---------GNLAHSYVMNVSSPHLVSWIV 323 T N KE +M ++ S S+N GN +++YV+N HL WI+ Sbjct: 213 TKTNPFTKEQLEMLQQLMSQNFLSQSSNLTSSTGMLAQKGNFSNAYVIN--KQHLNPWII 270 Query: 324 DTGATDH 344 D+GA+DH Sbjct: 271 DSGASDH 277 >emb|CAN74883.1| hypothetical protein VITISV_018571 [Vitis vinifera] Length = 994 Score = 59.7 bits (143), Expect = 4e-07 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 5/118 (4%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDK-GRYANWKGKSVANVETEDAHDTPLDSPVKEQKVD 182 CD C + GH +DTC++I+G P K R+AN K + N+ + D +P +P +++++ Sbjct: 519 CDHCRRPGHTKDTCWKIHGKPTDWKPSRFANDK-EGQGNLVSMDEKPSPKPTPFSKEQIE 577 Query: 183 PTFLNAVCKEMFKMFKDGASTSANFVGNLAHS----YVMNVSSPHLVSWIVDTGATDH 344 V +++F + + G+LA +NV L WI+D+GA+DH Sbjct: 578 ------VLQKLFSQSLPAPTPTVVGTGSLAQKGNFLSALNVKKEKLSPWIIDSGASDH 629 >ref|XP_006367210.1| PREDICTED: uncharacterized protein LOC102586703 [Solanum tuberosum] Length = 284 Score = 59.3 bits (142), Expect = 5e-07 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 23/136 (16%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETED------AHDTPLDSPVK 167 C CHK G+L+D C+Q+ GYP AN+KGK +AN + D ++D+ P Sbjct: 118 CTHCHKHGNLKDICFQLIGYP-------ANYKGKRLANNVSTDYGSIRSSYDSSCFVPST 170 Query: 168 EQ---------------KVDPTFLNAVCKEMFK-MFKDGASTSANFVGNLAHSYVMNVS- 296 +Q + P N V + + K + + +TS N N A + N Sbjct: 171 KQSQQQYGSGFGAGSVPQFTPNQYNQVLQMLNKPLIHEETTTSTNINANAAGIFAGNSKF 230 Query: 297 SPHLVSWIVDTGATDH 344 + + +WIVD+GATDH Sbjct: 231 NSYSFNWIVDSGATDH 246 >ref|XP_004243863.1| PREDICTED: uncharacterized protein LOC101259350 [Solanum lycopersicum] Length = 531 Score = 58.5 bits (140), Expect = 9e-07 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%) Frame = +3 Query: 3 RCDFCHKKGHLRDTCYQIYGYP----YKDKGRYANWKGKSVANVETEDAHDTPLDSPVKE 170 +CD+C +GH+ C++++GYP +K KG G + N ++ + S + Sbjct: 217 KCDYCKNQGHIEANCFRLHGYPTDWKFKKKG-----TGNNAYNANNVQTDNSSMHSGARN 271 Query: 171 QKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMNVSSPHLVSWIVDTGATDH 344 P+ + + M DG +++AN + N+A +NV + WI+D+GAT+H Sbjct: 272 PPRAPSLTDEQHDHIQHML-DGDTSTANVMANMAGMTHINVIKLTDLPWIIDSGATNH 328 >ref|XP_004229082.1| PREDICTED: uncharacterized protein LOC101247852 [Solanum lycopersicum] Length = 575 Score = 57.4 bits (137), Expect = 2e-06 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%) Frame = +3 Query: 3 RCDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPL-------DSP 161 +CD CHK GH++ C+++ GYP + KG+ + ++ E+ H P + Sbjct: 263 KCDHCHKTGHVKLDCFKLIGYPSEFKGKRYSVVAGNLVYEESSIHHHAPQPTQKESHPAA 322 Query: 162 VKEQKVDPTFLNAVCKEMFKMFKDGASTSANFVGNLA-HSYVMNVSSPHLVSWIVDTGAT 338 E P F +++ +M + V N+A +SY+ +S + W+VDTGAT Sbjct: 323 ASEMMPMPMFTPQQHQKLIQMLNQTTVGDTHCVANMAGNSYLSKGTS---IQWVVDTGAT 379 Query: 339 DH 344 H Sbjct: 380 HH 381 >emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera] Length = 1394 Score = 57.0 bits (136), Expect = 3e-06 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 6/119 (5%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185 CD C K GH R+TC++I+G P K R K +V T++ P SP +++++ Sbjct: 262 CDHCKKXGHSRETCWKIHGXPVDWKPRQPLEKEGRGNHVATDEQXPKPEASPFNKEQME- 320 Query: 186 TFLNAVCKEMFKMFKDGASTSANFVGN--LAHS----YVMNVSSPHLVSWIVDTGATDH 344 L + + + S+S +G+ LAH V WIVD+GA+DH Sbjct: 321 -MLQKLLSPLLSVQSQXGSSSNQVIGSGTLAHKGNFLSAFTVGKKRKKPWIVDSGASDH 378 >gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus notabilis] Length = 3263 Score = 56.6 bits (135), Expect = 3e-06 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 2/115 (1%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYP--YKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKV 179 CD+C K GH ++ C++++G P +K K R+ VA+ D+ P SP ++++ Sbjct: 271 CDYCKKLGHYKEACWKLHGKPADWKPKPRFDRDSKAHVAS--NSDSAPVPEPSPFNKEQM 328 Query: 180 DPTFLNAVCKEMFKMFKDGASTSANFVGNLAHSYVMNVSSPHLVSWIVDTGATDH 344 + V +++F G T A V + + WIVDTGA+DH Sbjct: 329 N------VLQKLFSQVGSGNITGAGLVAQTDPHTAFTANHGGMRPWIVDTGASDH 377 >emb|CAN77904.1| hypothetical protein VITISV_024390 [Vitis vinifera] Length = 1210 Score = 55.8 bits (133), Expect = 6e-06 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185 C+ C K GH +DTC+ ++G P K R N A+ +T+ A TP S +++ Sbjct: 257 CEHCKKLGHTKDTCWTLHGKPANWKPRQPNKAHSHQASTKTQ-ADKTP--SEIRQSTSSE 313 Query: 186 TFLNAVCKEMFKMFKD----GASTSANFVGNLAHS---YVMNVSSPHLVSWIVDTGATDH 344 F + ++++ F + S++ G+L H ++ + H+ WI+D+GA+DH Sbjct: 314 DFNSBQLAKLYEFFSNFQASXQSSTTLSSGSLTHKDTFFIALSAMSHITPWIIDSGASDH 373 >emb|CAN62020.1| hypothetical protein VITISV_019562 [Vitis vinifera] Length = 544 Score = 55.1 bits (131), Expect = 1e-05 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 6/119 (5%) Frame = +3 Query: 6 CDFCHKKGHLRDTCYQIYGYPYKDKGRYANWKGKSVANVETEDAHDTPLDSPVKEQKVDP 185 CD C K GH R+TC++I+G P K R K +V T++ P SP +++++ Sbjct: 336 CDHCRKXGHSRETCWKIHGKPVDWKPRQPLEKEGRGNHVATDEQSXQPEASPFNKEQME- 394 Query: 186 TFLNAVCKEMFKMFKDGASTSANFVGN--LAHS----YVMNVSSPHLVSWIVDTGATDH 344 L + + + S+S +G+ LAH WIVD+GA+DH Sbjct: 395 -MLQKLLSPLLSVQSQTGSSSNQVIGSGTLAHKGNFLSAFTAGKKRKKPWIVDSGASDH 452