BLASTX nr result
ID: Rheum21_contig00026812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026812
(199 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19935.1| coat protein [Nandina mosaic virus] 127 2e-27
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus] 124 1e-26
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi... 123 2e-26
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus] 123 3e-26
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]... 122 5e-26
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus] 120 2e-25
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA... 119 3e-25
gb|AAW30636.1| coat protein [Tulip virus X] 119 3e-25
gb|ACE62921.1| coat protein [Tulip virus X] 116 3e-24
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7... 91 2e-16
gb|ADE10206.1| coat protein [Hydrangea ringspot virus] 82 7e-14
ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|5679... 82 7e-14
gb|AFU63340.1| coat protein [Alternanthera mosaic virus] 74 2e-11
gb|AFB81318.1| coat protein [Alternanthera mosaic virus] 74 2e-11
ref|YP_459948.1| coat protein [Alternanthera mosaic virus] gi|62... 73 5e-11
gb|AFU63337.1| coat protein [Alternanthera mosaic virus] 73 5e-11
gb|AFB81324.1| coat protein [Alternanthera mosaic virus] 73 5e-11
dbj|BAJ17501.1| coat protein [Lagenaria mild mosaic virus] 73 5e-11
gb|AAX86015.1| coat protein [Alternanthera mosaic virus] gi|6254... 73 5e-11
gb|AAD12241.1| capsid protein [Alternanthera mosaic virus] 71 2e-10
>gb|AAX19935.1| coat protein [Nandina mosaic virus]
Length = 207
Score = 127 bits (319), Expect = 2e-27
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEPLGG+SRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 189
Query: 183 GQLSN 197
GQLS+
Sbjct: 190 GQLSS 194
>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 124 bits (311), Expect = 1e-26
Identities = 60/65 (92%), Positives = 65/65 (100%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA++SNLASTSTQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASNSNLASTSTQFTR 189
Query: 183 GQLSN 197
GQLSN
Sbjct: 190 GQLSN 194
>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
gi|169219481|dbj|BAG12132.1| coat protein [Plantago
asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
protein [Plantago asiatica mosaic virus]
gi|169219499|dbj|BAG12147.1| coat protein [Plantago
asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
protein [Plantago asiatica mosaic virus]
Length = 207
Score = 123 bits (309), Expect = 2e-26
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA+SSNLASTSTQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNLASTSTQFTR 189
Query: 183 GQLSN 197
G LSN
Sbjct: 190 GHLSN 194
>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 123 bits (308), Expect = 3e-26
Identities = 60/65 (92%), Positives = 65/65 (100%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEPLGG++RTPTPDEVTANETARSLNLFEARA++SNLASTSTQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPLGGLTRTPTPDEVTANETARSLNLFEARASTSNLASTSTQFTR 189
Query: 183 GQLSN 197
GQLS+
Sbjct: 190 GQLSS 194
>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
protein; AltName: Full=Capsid protein; Short=CP
gi|311649|emb|CAA79765.1| capsid protein [Plantago
asiatica mosaic virus]
Length = 207
Score = 122 bits (306), Expect = 5e-26
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEP GG+SRTPTPDEVTANETARSLNLFEARA+ SNLASTSTQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPPGGLSRTPTPDEVTANETARSLNLFEARASYSNLASTSTQFTR 189
Query: 183 GQLSN 197
GQLSN
Sbjct: 190 GQLSN 194
>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 120 bits (301), Expect = 2e-25
Identities = 59/65 (90%), Positives = 63/65 (96%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFD FDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA+SSNLASTSTQFTR
Sbjct: 130 AGFDSFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNLASTSTQFTR 189
Query: 183 GQLSN 197
G LSN
Sbjct: 190 GHLSN 194
>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
protein [Tulip virus X]
Length = 207
Score = 119 bits (299), Expect = 3e-25
Identities = 57/65 (87%), Positives = 63/65 (96%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS+NLA+TSTQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNLATTSTQFTR 189
Query: 183 GQLSN 197
GQLSN
Sbjct: 190 GQLSN 194
>gb|AAW30636.1| coat protein [Tulip virus X]
Length = 157
Score = 119 bits (299), Expect = 3e-25
Identities = 57/65 (87%), Positives = 63/65 (96%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS+NLA+TSTQFTR
Sbjct: 80 AGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNLATTSTQFTR 139
Query: 183 GQLSN 197
GQLSN
Sbjct: 140 GQLSN 144
>gb|ACE62921.1| coat protein [Tulip virus X]
Length = 207
Score = 116 bits (291), Expect = 3e-24
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS++LA+T+TQFTR
Sbjct: 130 AGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNSLATTATQFTR 189
Query: 183 GQLSN 197
GQLSN
Sbjct: 190 GQLSN 194
>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
coat protein [Cassava common mosaic virus]
gi|1587827|prf||2207297E ORF 5
Length = 229
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/65 (66%), Positives = 54/65 (83%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDG++N AALEP GG+ R PTP E+ A ETARSLNLFEA++ +NLA+ +TQ TR
Sbjct: 152 AGFDFFDGVMNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLATNATQVTR 211
Query: 183 GQLSN 197
G+LS+
Sbjct: 212 GRLSS 216
>gb|ADE10206.1| coat protein [Hydrangea ringspot virus]
Length = 225
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDG+LN A+L+P G+ R PT E AN TA+SL+LFEA SNLAST+TQFTR
Sbjct: 149 AGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQRSNLASTATQFTR 208
Query: 183 GQLSN 197
G+L++
Sbjct: 209 GRLTD 213
>ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|56792009|gb|AAW30452.1|
coat protein [Hydrangea ringspot virus]
Length = 225
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
AGFDFFDG+LN A+L+P G+ R PT E AN TA+SL+LFEA SNLAST+TQFTR
Sbjct: 149 AGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQRSNLASTATQFTR 208
Query: 183 GQLSN 197
G+L++
Sbjct: 209 GRLTD 213
>gb|AFU63340.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ RTP+ E AN T + +NLF+A A +NLAS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195
>gb|AFB81318.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ RTP+ E AN T + +NLF+A A +NLAS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195
>ref|YP_459948.1| coat protein [Alternanthera mosaic virus]
gi|62082371|gb|AAX62023.1| coat protein [Alternanthera
mosaic virus] gi|62546293|gb|AAX86018.1| coat protein
[Alternanthera mosaic virus]
Length = 207
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ RTP+ E AN T + +NLF+A A +N AS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195
>gb|AFU63337.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ RTP+ E AN T + +NLF+A A +N AS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAARDNNFASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195
>gb|AFB81324.1| coat protein [Alternanthera mosaic virus]
Length = 207
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ RTP+ E AN T + +NLF+A A +N AS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195
>dbj|BAJ17501.1| coat protein [Lagenaria mild mosaic virus]
Length = 208
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P G+ R+PT +E AN T + +NLF+A A +N AS S+ TR
Sbjct: 132 AAFDFFDGVENPAAMQPPQGLIRSPTQEERIANHTNKQVNLFQAAAQDNNFASNSSFITR 191
Query: 183 GQLS 194
GQLS
Sbjct: 192 GQLS 195
>gb|AAX86015.1| coat protein [Alternanthera mosaic virus]
gi|62546301|gb|AAX86024.1| coat protein [Alternanthera
mosaic virus] gi|239819298|gb|ACS28232.1| coat protein
[Alternanthera mosaic virus] gi|239819304|gb|ACS28237.1|
coat protein [Alternanthera mosaic virus]
Length = 207
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/65 (53%), Positives = 46/65 (70%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ RTP+ E AN T + +NLF+A A +N AS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195
>gb|AAD12241.1| capsid protein [Alternanthera mosaic virus]
Length = 207
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 3 AGFDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTR 182
A FDFFDG+ NPAA++P GG+ R P+ E AN T + +NLF+A A +N AS S T+
Sbjct: 131 AAFDFFDGVENPAAMQPPGGLVRAPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITK 190
Query: 183 GQLSN 197
GQLS+
Sbjct: 191 GQLSS 195