BLASTX nr result
ID: Rheum21_contig00026722
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026722
(572 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis... 112 7e-23
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr... 111 1e-22
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi... 109 6e-22
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 107 2e-21
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr... 103 4e-20
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ... 103 4e-20
gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus... 102 5e-20
gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p... 102 9e-20
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar... 99 1e-18
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ... 96 5e-18
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps... 95 1e-17
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 94 2e-17
ref|XP_006489434.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum lycopersicum]
Length = 522
Score = 114 bits (286), Expect = 1e-23
Identities = 52/94 (55%), Positives = 76/94 (80%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+M M+PD VIWGSLLSA R HG+VE+A +++ ++ ELD +SS YV+M+N+ AASG ++
Sbjct: 414 SMKMEPDAVIWGSLLSACRSHGNVELARWSAENLLELDPNESSGYVLMANMYAASGLFDE 473
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASG 282
A+ +R+SM+++H+ KE G SS+EI+GEV EFASG
Sbjct: 474 AMNERISMKEKHIAKEPGCSSVEINGEVHEFASG 507
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 114 bits (285), Expect = 2e-23
Identities = 50/94 (53%), Positives = 74/94 (78%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP++PD +IW SLLSA RKHG+VE+A A++H+ +LD DS YV++SN+ AAS ++E A
Sbjct: 420 MPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEA 479
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
+EQR+SM+++ + KE G S IE++GE+ EF +GG
Sbjct: 480 MEQRLSMKEKQIEKEPGCSLIEVNGEIHEFVAGG 513
>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
gi|587904202|gb|EXB92403.1| hypothetical protein
L484_021387 [Morus notabilis]
Length = 530
Score = 112 bits (280), Expect = 7e-23
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+MP++PD +IWGSLLSA RKHG++EMA A V ELD +SSAYV+MSNV +S Y+
Sbjct: 421 SMPINPDAIIWGSLLSACRKHGNIEMAQRALERVIELDPSESSAYVLMSNVYGSSSHYDE 480
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
AV+QR++M+++ + KE G S IE+DGEV EF + G
Sbjct: 481 AVKQRINMKEKRIEKEPGCSLIEVDGEVHEFVAFG 515
>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Citrus sinensis]
Length = 534
Score = 111 bits (277), Expect = 1e-22
Identities = 52/95 (54%), Positives = 72/95 (75%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+MP DPD +IWGSLLSA RKHG++EMA A++ + ELD +S YV+MSN+ AAS ++E
Sbjct: 415 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 474
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
A+E+R+ M++ + KE G S IE+DGEV EF +GG
Sbjct: 475 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 509
>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Solanum tuberosum]
Length = 522
Score = 111 bits (277), Expect = 1e-22
Identities = 49/94 (52%), Positives = 75/94 (79%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+M M+PD VIW SLLSA R HG++E+A +++ ++ ELD +SS YV+M+N+ AASG++
Sbjct: 414 SMKMEPDAVIWCSLLSACRSHGNMELARWSAENLLELDPNESSGYVLMANMYAASGQFAE 473
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASG 282
A+++R+SM+ +H+ KE G SS+E++GEV EFASG
Sbjct: 474 AIDERISMKDKHIAKEPGCSSVEVNGEVHEFASG 507
>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
gi|557539373|gb|ESR50417.1| hypothetical protein
CICLE_v10031197mg [Citrus clementina]
Length = 534
Score = 111 bits (277), Expect = 1e-22
Identities = 52/95 (54%), Positives = 72/95 (75%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+MP DPD +IWGSLLSA RKHG++EMA A++ + ELD +S YV+MSN+ AAS ++E
Sbjct: 415 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 474
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
A+E+R+ M++ + KE G S IE+DGEV EF +GG
Sbjct: 475 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 509
>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 550
Score = 109 bits (272), Expect = 6e-22
Identities = 52/94 (55%), Positives = 69/94 (73%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP+ D +IWGSLLS+ RKH D+EMA A++HV ELD D YV+MSNV AAS ++E A
Sbjct: 416 MPLKADAIIWGSLLSSCRKHRDIEMAKRAAKHVIELDPSDCCGYVLMSNVYAASSQFEEA 475
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
+ +R+SM+ + + KE G S IE+DGEV EF +GG
Sbjct: 476 MRERLSMKGQKIEKEPGCSLIEVDGEVHEFIAGG 509
>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cicer arietinum]
Length = 536
Score = 107 bits (268), Expect = 2e-21
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP+ PD +IWGSLLS+ RKHG+V+ A A++ V EL+ D+S YV+MSNV AAS ++E A
Sbjct: 421 MPIKPDAIIWGSLLSSCRKHGNVQRAKRAAQRVYELNPSDASGYVLMSNVYAASNKFEEA 480
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
VEQRV M++ KE G SSIE+ GEV EF +GG
Sbjct: 481 VEQRVLMKENLTEKEPGCSSIELYGEVHEFLAGG 514
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 107 bits (267), Expect = 2e-21
Identities = 47/95 (49%), Positives = 75/95 (78%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+MP++PD +IWGSLLS+ R++G++EMA A++ V ELD +SS+++++SNV AA +E
Sbjct: 391 SMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEE 450
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
A+EQR+S++++ + KE G S IE++GEV EF +GG
Sbjct: 451 AIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFVAGG 485
>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 106 bits (265), Expect = 4e-21
Identities = 53/94 (56%), Positives = 71/94 (75%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP+ D +IWGSLLS+ RKHG+VE+A A++ V EL+ D+S Y++MSNV AAS ++E A
Sbjct: 419 MPLKADFIIWGSLLSSCRKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEA 478
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
+EQR+ MR+R KE G SSIE+ GEV EF +GG
Sbjct: 479 MEQRILMRERLAEKEPGCSSIELYGEVHEFLAGG 512
>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
gi|557112734|gb|ESQ53018.1| hypothetical protein
EUTSA_v10017572mg [Eutrema salsugineum]
Length = 546
Score = 103 bits (256), Expect = 4e-20
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MPM+ D +IW SLLSA RK+G+VEMA A++ +K+LD D+ YV+MSN A+ G +E A
Sbjct: 420 MPMEQDAIIWSSLLSACRKNGNVEMAERAAKCLKKLDPDDTCGYVLMSNAYASYGLFEEA 479
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
VEQRV M++R + KE G SSIE+D EV EF S G
Sbjct: 480 VEQRVLMKERQMEKEIGCSSIEVDFEVHEFVSCG 513
>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 542
Score = 103 bits (256), Expect = 4e-20
Identities = 51/94 (54%), Positives = 70/94 (74%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP+ PD +IWGSLLS+ RKH +V++A A++ V EL+ D+S YV+MSNV AAS ++E A
Sbjct: 427 MPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEA 486
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
+EQR+ M++ KE G SSIE+ GEV EF +GG
Sbjct: 487 IEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGG 520
>gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
Length = 525
Score = 102 bits (255), Expect = 5e-20
Identities = 50/94 (53%), Positives = 72/94 (76%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
M ++ D +IWGSLLS+ RKHG+VE+A A++ V EL+ +++S Y++MSNV AAS ++E A
Sbjct: 417 MSIEADFIIWGSLLSSCRKHGNVEIAKRAAQRVFELNPREASGYLLMSNVQAASNQFEEA 476
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
+E R+ M++R V KE G SSIE+ GEV EF +GG
Sbjct: 477 LEHRILMKERLVEKEPGCSSIELHGEVHEFLAGG 510
>gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 538
Score = 102 bits (253), Expect = 9e-20
Identities = 50/95 (52%), Positives = 71/95 (74%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+MP++ D +IWGSLLSA RKHG+V MA A++ V ELD + S YV+MSNV AA+ ++E
Sbjct: 417 SMPVNEDAIIWGSLLSACRKHGNVGMAKRAAKLVIELDPAERSGYVLMSNVYAATRQFEE 476
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
A++QR+SM+++ + KE G S IE++ V EF SGG
Sbjct: 477 AIKQRLSMKEKQLQKEPGCSLIEVNDVVHEFVSGG 511
>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein
[Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein
[Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 559
Score = 98.6 bits (244), Expect = 1e-18
Identities = 51/95 (53%), Positives = 69/95 (72%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP++ D VIW SLLSA RK G+VEMA A++ +K+LD ++ YV++SN A+ G +E A
Sbjct: 421 MPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA 480
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGGG 288
VEQR+ M++R + KE G SSIE+D EV EF S GG
Sbjct: 481 VEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGG 515
>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/95 (49%), Positives = 66/95 (69%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP++ D +IWG LLSA R +G+ EMA A+ V ELD +++ YV+M+N+ A + A
Sbjct: 419 MPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGA 478
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGGG 288
+E+RV+MR + V KE GGS IE+D EV EF +GGG
Sbjct: 479 MEKRVAMRMKKVEKEPGGSFIEVDEEVHEFIAGGG 513
>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325851|gb|EFH56271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 542
Score = 96.3 bits (238), Expect = 5e-18
Identities = 49/94 (52%), Positives = 67/94 (71%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP++ D +IW SLL+A RK+G+VEMA A+ +K LD ++ YV+MSN A+ G +E A
Sbjct: 421 MPVEGDTIIWSSLLAACRKNGNVEMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEA 480
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
VEQR+ M++R + KE G SSIE+D EV EF S G
Sbjct: 481 VEQRLLMKERQMEKEVGCSSIEVDFEVHEFVSCG 514
>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
gi|565472276|ref|XP_006293940.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
gi|482562647|gb|EOA26837.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
gi|482562648|gb|EOA26838.1| hypothetical protein
CARUB_v10022931mg [Capsella rubella]
Length = 555
Score = 95.1 bits (235), Expect = 1e-17
Identities = 48/94 (51%), Positives = 67/94 (71%)
Frame = +1
Query: 4 MPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYESA 183
MP++ D +IW SLL+A RK+ +VEMA A++ +K+LD ++ YV+MSN A G +E A
Sbjct: 416 MPVEEDAIIWSSLLAACRKYSNVEMAKRAAKCLKKLDPDETCGYVLMSNAYAHYGLFEEA 475
Query: 184 VEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
VEQR+ M++R + KE G SSIE+D EV EF S G
Sbjct: 476 VEQRILMKERKMEKEVGCSSIEVDFEVHEFVSCG 509
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 94.4 bits (233), Expect = 2e-17
Identities = 41/95 (43%), Positives = 71/95 (74%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+M +DPD +IWGSLL + K+G+++MA A+ H+ EL+ +SS++V+++N AA+ +E
Sbjct: 416 SMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEE 475
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASGG 285
A+++R+++++ H+ KE G S IE+ GEV EF +GG
Sbjct: 476 ALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGG 510
>ref|XP_006489434.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Citrus sinensis]
Length = 844
Score = 90.5 bits (223), Expect = 3e-16
Identities = 39/94 (41%), Positives = 70/94 (74%)
Frame = +1
Query: 1 AMPMDPDVVIWGSLLSASRKHGDVEMASFASRHVKELDSKDSSAYVMMSNVLAASGEYES 180
+MP++P+ VIWGSLL+A +KH +V++A++A+ + ELD + S +V++SN+ A++G++ +
Sbjct: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
Query: 181 AVEQRVSMRKRHVLKERGGSSIEIDGEVREFASG 282
R+ M+++ + K G SSIE++G+V EF SG
Sbjct: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727