BLASTX nr result

ID: Rheum21_contig00026649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00026649
         (255 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064005.1| orf152 gene product (mitochondrion) [Beta vulga...    87   6e-21
ref|YP_007516863.1| hypothetical protein GlmaxMp14 (mitochondrio...   103   3e-20
ref|XP_002538339.1| conserved hypothetical protein [Ricinus comm...    78   1e-12

>ref|NP_064005.1| orf152 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435150|ref|YP_004222368.1| hypothetical protein
           BevumaM_p135 [Beta vulgaris subsp. maritima]
           gi|346683241|ref|YP_004842173.1| hypothetical protein
           BemaM_p129 [Beta macrocarpa] gi|9049307|dbj|BAA99317.1|
           orf152 [Beta vulgaris subsp. vulgaris]
           gi|54606701|dbj|BAD66724.1| orf152 [Beta vulgaris subsp.
           vulgaris] gi|54606745|dbj|BAD66768.1| orf152 [Beta
           vulgaris subsp. vulgaris] gi|317905600|emb|CBJ14007.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|319439883|emb|CBJ17583.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|320148037|emb|CBJ20701.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500159|emb|CBX24978.1| hypothetical protein [Beta
           macrocarpa] gi|384977915|emb|CBL54139.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 152

 Score = 86.7 bits (213), Expect(2) = 6e-21
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -3

Query: 181 FYQLIPIHSVKVSTAFSRPSTERCTMLIGIGKDPLVHVLEGSIHGNH 41
           ++  +PIHSVKVSTAFSRPSTERCTMLIGIGKD L+HVLEGSIHGNH
Sbjct: 105 YHDSMPIHSVKVSTAFSRPSTERCTMLIGIGKDLLLHVLEGSIHGNH 151



 Score = 39.7 bits (91), Expect(2) = 6e-21
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 255 ARVRIQSAHSERKKRSSW 202
           ARVRIQSAHSERKKRSSW
Sbjct: 79  ARVRIQSAHSERKKRSSW 96


>ref|YP_007516863.1| hypothetical protein GlmaxMp14 (mitochondrion) [Glycine max]
           gi|403311592|gb|AFR34340.1| hypothetical protein
           GlmaxMp14 (mitochondrion) [Glycine max]
          Length = 202

 Score =  103 bits (256), Expect = 3e-20
 Identities = 56/84 (66%), Positives = 62/84 (73%)
 Frame = -3

Query: 253 ASTHPVST*RTKKAFILDRRLNPNFYQLIPIHSVKVSTAFSRPSTERCTMLIGIGKDPLV 74
           +S H  S  + + ++IL   LN N Y+LIPIHSVKVST    PSTERCTMLIGIGKD LV
Sbjct: 121 SSQHAHSERKKRSSWILF--LNQNVYKLIPIHSVKVSTG---PSTERCTMLIGIGKDLLV 175

Query: 73  HVLEGSIHGNHQYFLSRTWYGFVL 2
           HVLEGSIHGN   FL R WYGFVL
Sbjct: 176 HVLEGSIHGNQNVFLPRAWYGFVL 199


>ref|XP_002538339.1| conserved hypothetical protein [Ricinus communis]
           gi|223512664|gb|EEF24045.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 153

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   KNKAIPCPRKKVLMIAMNAALEDVYKRVFADSYQHGAPLSRRA 130
           KNKAIP PR KV+MIAMNAALEDVYK+VFADSYQHGAPLSR A
Sbjct: 111 KNKAIPYPRDKVVMIAMNAALEDVYKKVFADSYQHGAPLSRGA 153


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