BLASTX nr result
ID: Rheum21_contig00026576
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026576
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus pe... 86 5e-15
gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus pe... 86 7e-15
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 84 2e-14
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 84 2e-14
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 84 2e-14
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 84 2e-14
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 83 4e-14
ref|XP_003601650.1| Small subunit processome component-like prot... 82 7e-14
ref|XP_004305310.1| PREDICTED: small subunit processome componen... 81 2e-13
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 81 2e-13
gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [... 80 4e-13
ref|XP_006284893.1| hypothetical protein CARUB_v10006185mg [Caps... 79 6e-13
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 79 8e-13
ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated... 79 8e-13
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 78 1e-12
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 78 1e-12
gb|EPS64445.1| hypothetical protein M569_10337, partial [Genlise... 77 2e-12
gb|EXC21919.1| hypothetical protein L484_011084 [Morus notabilis] 77 2e-12
gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobro... 77 2e-12
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 75 1e-11
>gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEP-SNSTFFLD 349
MAT ++ AVKSLN +PGRR RFVFK+F R+ E EIDVF SL+ VK+EP + STFF D
Sbjct: 1 MATLSQAQAVKSLNKSPGRR--RFVFKSFSQRLEEVEIDVFRSLDKVKSEPQAGSTFFRD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67
>gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEP-SNSTFFLD 349
MAT ++ AVKSLN +PGRR RFVFK+F R+ E E+DVF SL+ VK+EP + STFF D
Sbjct: 1 MATPSQAQAVKSLNKSPGRR--RFVFKSFSQRLEEVEVDVFRSLDKVKSEPQAGSTFFRD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA+ + AVKSLN +PGRR RFVFK+F +I + EI+VF SL+ VKAEPS S+FF D
Sbjct: 1 MATAEHAAAVKSLNKSPGRR--RFVFKSFSQQIDDIEINVFRSLDKVKAEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CL++WRELN
Sbjct: 59 CLIEWRELN 67
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA+ + AVKSLN +PGRR RFVFK+F +I + EI+VF SL+ VKAEPS S+FF D
Sbjct: 1 MATAEHAAAVKSLNKSPGRR--RFVFKSFSQQIDDIEINVFRSLDKVKAEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CL++WRELN
Sbjct: 59 CLIEWRELN 67
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA + AVKSLN +PGRR RFVF+TF R+ E +IDV+ SL+ VK+EPS S+FF D
Sbjct: 1 MATASHAQAVKSLNKSPGRR--RFVFQTFSQRVQEIDIDVYRSLDKVKSEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CL++WRELN
Sbjct: 59 CLIEWRELN 67
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 83.6 bits (205), Expect = 2e-14
Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA ++ AVKSLN +PG RRFVFK+F DR+ E +I+V+ SL+ VKAEPS S+FF D
Sbjct: 1 MATASQARAVKSLNKSPG--GRRFVFKSFSDRVDEIDINVYRSLDKVKAEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CL++WRELN
Sbjct: 59 CLIEWRELN 67
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA+ + AVKSLN +PGRR RFVFK+F +I + EI+VF SL+ VKAEPS S+F D
Sbjct: 1 MATAEHAAAVKSLNKSPGRR--RFVFKSFSQQIDDIEINVFRSLDKVKAEPSEGSSFLRD 58
Query: 350 CLVQWRELN 376
CL+QWRELN
Sbjct: 59 CLIQWRELN 67
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago
truncatula] gi|355490698|gb|AES71901.1| Small subunit
processome component-like protein [Medicago truncatula]
Length = 2733
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT + AVKSLN +PGRR RFVFK+F DR+ + +I+V+ SL+ VKAEPS S+FF D
Sbjct: 1 MATPAHAQAVKSLNKSPGRR--RFVFKSFSDRVDDIDINVYRSLHKVKAEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67
>ref|XP_004305310.1| PREDICTED: small subunit processome component 20 homolog [Fragaria
vesca subsp. vesca]
Length = 2681
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/69 (63%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT+ ++ AVKSLN + GRR RFVFK+ R+ E EIDVF SL+ VK EPS STFF D
Sbjct: 1 MATSSQAQAVKSLNNSAGRR--RFVFKSISQRLEEVEIDVFRSLDKVKDEPSPGSTFFKD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA + AVKSLN +PG RRFVFK+ RI E EIDV+ SL+ VK++PS S+FF D
Sbjct: 1 MATASHAQAVKSLNKSPG--GRRFVFKSLSQRIVEIEIDVYRSLDKVKSQPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67
>gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus
vulgaris]
Length = 2722
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MATA + AVKSLN +PGR RFVFK+F +R+ E +++V+ SL VKAEPS S+FF D
Sbjct: 30 MATASHARAVKSLNKSPGRG--RFVFKSFSERVDEIDVNVYRSLEKVKAEPSEGSSFFRD 87
Query: 350 CLVQWRELN 376
CL++WRELN
Sbjct: 88 CLIEWRELN 96
>ref|XP_006284893.1| hypothetical protein CARUB_v10006185mg [Capsella rubella]
gi|482553598|gb|EOA17791.1| hypothetical protein
CARUB_v10006185mg [Capsella rubella]
Length = 2598
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT+ ++ AVKSLN + GR+ +FVFK F DRI + +I+V+ SL+ VKAEPS STFF D
Sbjct: 1 MATSADARAVKSLNNSEGRK--KFVFKNFSDRINDIDINVYRSLDKVKAEPSEGSTFFRD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT+ + AVKSLN + GR+ RFVFK F R+ E EIDVF SL+ +K EPS S+FF D
Sbjct: 1 MATSFHAQAVKSLNKSSGRK--RFVFKNFSQRLEEIEIDVFRSLDPLKTEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CLVQWRELN
Sbjct: 59 CLVQWRELN 67
>ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Vitis
vinifera]
Length = 224
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT+ + AVKSLN + GR+ RFVFK F R+ E EIDVF SL+ +K EPS S+FF D
Sbjct: 1 MATSFHAQAVKSLNKSSGRK--RFVFKNFSQRLEEIEIDVFRSLDPLKTEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CLVQWRELN
Sbjct: 59 CLVQWRELN 67
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT + AVKSLN +PGRR RF FKTF +RI + +IDV+ +L+ +KAEP+ S+FF D
Sbjct: 1 MATHSDMYAVKSLNKSPGRR--RFTFKTFSERIEDVDIDVYRNLDPLKAEPTEGSSFFRD 58
Query: 350 CLVQWRELN 376
C+ +WRELN
Sbjct: 59 CITEWRELN 67
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT + AVKSLN +PGRR RF FKTF +RI + +IDV+ +L+ +KAEP+ S+FF D
Sbjct: 1 MATHSDMYAVKSLNKSPGRR--RFTFKTFSERIEDVDIDVYRNLDPLKAEPTEGSSFFRD 58
Query: 350 CLVQWRELN 376
C+ +WRELN
Sbjct: 59 CITEWRELN 67
>gb|EPS64445.1| hypothetical protein M569_10337, partial [Genlisea aurea]
Length = 139
Score = 77.4 bits (189), Expect = 2e-12
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPSN-STFFLD 349
MAT ES AVK LN GRR RFVFKTF RI E +IDV+ SLN KAEPS+ S+FF D
Sbjct: 9 MATLSESRAVKGLNKCSGRR--RFVFKTFSQRIEEIDIDVYRSLNVSKAEPSDGSSFFRD 66
Query: 350 CLVQWRELN 376
CL+++RELN
Sbjct: 67 CLIEYRELN 75
>gb|EXC21919.1| hypothetical protein L484_011084 [Morus notabilis]
Length = 412
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT + AVKSLN + GR+ RFVFKTF RI + +IDV+ SL+ VK+EPS S+FF D
Sbjct: 1 MATPSHAQAVKSLNKSSGRQ--RFVFKTFSQRIEDIDIDVYRSLDKVKSEPSEGSSFFRD 58
Query: 350 CLVQWRELN 376
CL +WRELN
Sbjct: 59 CLAEWRELN 67
>gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobroma cacao]
Length = 2725
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT + AVKSLN +PGRR RFVFKTF RI + +I+VF SL+ +K+EPS S+F D
Sbjct: 1 MATPSHAQAVKSLNKSPGRR--RFVFKTFSQRIEDIDINVFRSLDKIKSEPSEGSSFLRD 58
Query: 350 CLVQWRELN 376
CL +WRELN
Sbjct: 59 CLNEWRELN 67
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 173 MATAKESVAVKSLNWNPGRRNRRFVFKTFRDRIAETEIDVFHSLNHVKAEPS-NSTFFLD 349
MAT + AVKSLN +PG RRFVFKTF +R+ + +I+V+ SL V PS STFF D
Sbjct: 1 MATPSHAQAVKSLNKSPG--GRRFVFKTFSERLDDVDINVYRSLEQVAELPSEGSTFFKD 58
Query: 350 CLVQWRELN 376
CLV+WRELN
Sbjct: 59 CLVEWRELN 67