BLASTX nr result
ID: Rheum21_contig00026540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026540
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding... 90 3e-16
gb|EMJ15547.1| hypothetical protein PRUPE_ppa000116mg [Prunus pe... 90 3e-16
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca... 89 8e-16
ref|XP_006349779.1| PREDICTED: chromodomain-helicase-DNA-binding... 88 1e-15
ref|XP_004252878.1| PREDICTED: chromodomain-helicase-DNA-binding... 88 1e-15
gb|EOY32820.1| Chromatin remodeling complex subunit isoform 2 [T... 88 1e-15
gb|EOY32819.1| Chromatin remodeling complex subunit isoform 1 [T... 88 1e-15
ref|XP_004958583.1| PREDICTED: chromodomain-helicase-DNA-binding... 87 2e-15
ref|XP_004958582.1| PREDICTED: chromodomain-helicase-DNA-binding... 87 2e-15
ref|XP_004958581.1| PREDICTED: chromodomain-helicase-DNA-binding... 87 2e-15
ref|XP_004958580.1| PREDICTED: chromodomain-helicase-DNA-binding... 87 2e-15
ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Popu... 87 3e-15
ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding... 86 4e-15
gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japo... 86 4e-15
gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indi... 86 4e-15
ref|XP_006658068.1| PREDICTED: chromodomain-helicase-DNA-binding... 86 5e-15
ref|XP_006658067.1| PREDICTED: chromodomain-helicase-DNA-binding... 86 5e-15
ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding... 86 5e-15
gb|EPS67001.1| hypothetical protein M569_07775, partial [Genlise... 86 5e-15
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding... 86 7e-15
>ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Fragaria vesca subsp. vesca]
Length = 1746
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAMAV GK VD Q+KK KGSLR+LDE PEWL+GGKLRDYQLEGL FLVN
Sbjct: 587 KAREAAMAVQGKMVDLQRKKSKGSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 639
>gb|EMJ15547.1| hypothetical protein PRUPE_ppa000116mg [Prunus persica]
Length = 1761
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAMAV GK VD Q+KK KGSLR+LDE PEWL+GGKLRDYQLEGL FLVN
Sbjct: 588 KAREAAMAVQGKMVDLQRKKSKGSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 640
>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 2083
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAM+V GK VDFQ+++ KGSLR+LDE PEWL+GGKLRDYQLEGL FLVN
Sbjct: 561 KTREAAMSVQGKMVDFQRRQSKGSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 613
>ref|XP_006349779.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Solanum tuberosum] gi|565366197|ref|XP_006349780.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Solanum tuberosum]
gi|565366199|ref|XP_006349781.1| PREDICTED:
chromodomain-helicase-DNA-binding protein 1-like isoform
X3 [Solanum tuberosum]
Length = 1707
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA+ V GKSVDFQ+KK +GSLR+L+E PEWL+GGKLRDYQLEGL FLVN
Sbjct: 555 KAREAAIMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVN 607
>ref|XP_004252878.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Solanum lycopersicum]
Length = 1707
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA+ V GKSVDFQ+KK +GSLR+L+E PEWL+GGKLRDYQLEGL FLVN
Sbjct: 555 KAREAAIMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVN 607
>gb|EOY32820.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao]
Length = 1810
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAMAV GK VD Q+KK K SLR+LDE PEWLRGGKLRDYQLEGL FLVN
Sbjct: 584 KAREAAMAVQGKMVDHQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 636
>gb|EOY32819.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao]
gi|508785565|gb|EOY32821.1| Chromatin remodeling complex
subunit isoform 1 [Theobroma cacao]
Length = 1768
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAMAV GK VD Q+KK K SLR+LDE PEWLRGGKLRDYQLEGL FLVN
Sbjct: 584 KAREAAMAVQGKMVDHQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 636
>ref|XP_004958583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X4 [Setaria italica]
Length = 1693
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA A+ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 531 KAREAATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 583
>ref|XP_004958582.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X3 [Setaria italica]
Length = 1719
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA A+ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 546 KAREAATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 598
>ref|XP_004958581.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Setaria italica]
Length = 1725
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA A+ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 545 KAREAATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 597
>ref|XP_004958580.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Setaria italica]
Length = 1726
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA A+ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 546 KAREAATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 598
>ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Populus trichocarpa]
gi|222849777|gb|EEE87324.1| hypothetical protein
POPTR_0009s05250g [Populus trichocarpa]
Length = 1748
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/53 (79%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA+AV GK VD Q+KK K SLR+LDE PEWLRGGKLRDYQLEGL FLVN
Sbjct: 580 KAREAAIAVQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 632
>ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Brachypodium distachyon]
Length = 1734
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K RE A AV GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 561 KAREVATAVLGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 613
>gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group]
Length = 1734
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA ++ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 558 KAREAATSILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 610
>gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group]
Length = 1734
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA ++ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 558 KAREAATSILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 610
>ref|XP_006658068.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Oryza brachyantha]
Length = 1731
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K RE A A+ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 558 KAREVATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 610
>ref|XP_006658067.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Oryza brachyantha]
Length = 1732
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K RE A A+ GK+VDFQ+KK K SLRRLD+ PEWL+GGKLRDYQLEGL FLVN
Sbjct: 559 KAREVATAILGKTVDFQRKKSKASLRRLDDQPEWLKGGKLRDYQLEGLNFLVN 611
>ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Citrus sinensis] gi|568833055|ref|XP_006470733.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Citrus sinensis]
Length = 1777
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAMA GK VD Q+KK K SLR+LDE PEWLRGGKLRDYQLEGL FLVN
Sbjct: 589 KAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 641
>gb|EPS67001.1| hypothetical protein M569_07775, partial [Genlisea aurea]
Length = 1485
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAA V GKSVD Q+KK KGSLRRLDE P+WL+GG LRDYQLEGL FLVN
Sbjct: 492 KAREAAAMVQGKSVDLQRKKSKGSLRRLDEQPDWLKGGNLRDYQLEGLNFLVN 544
>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Glycine max] gi|571506899|ref|XP_006595768.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Glycine max]
Length = 1764
Score = 85.5 bits (210), Expect = 7e-15
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -2
Query: 317 KVREAAMAVPGKSVDFQQKKIKGSLRRLDEHPEWLRGGKLRDYQLEGLKFLVN 159
K REAAMAV GK VD Q+KK K SLR+L+E PEWL+GGKLRDYQLEGL FLVN
Sbjct: 593 KAREAAMAVQGKMVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVN 645