BLASTX nr result
ID: Rheum21_contig00026534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026534
(613 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006411253.1| hypothetical protein EUTSA_v10017822mg [Eutr... 104 2e-20
gb|ACK56115.1| ELF4-like protein [Ipomoea nil] 103 3e-20
ref|XP_002299809.2| hypothetical protein POPTR_0001s25870g [Popu... 103 5e-20
ref|XP_006435734.1| hypothetical protein CICLE_v10032998mg [Citr... 102 6e-20
gb|AAQ73526.1| early flowering 4 [Mesembryanthemum crystallinum] 102 8e-20
ref|XP_002533647.1| conserved hypothetical protein [Ricinus comm... 102 1e-19
ref|XP_003537487.1| PREDICTED: protein EARLY FLOWERING 4-like [G... 101 1e-19
gb|EXC09419.1| hypothetical protein L484_002382 [Morus notabilis] 101 2e-19
ref|XP_004307648.1| PREDICTED: protein EARLY FLOWERING 4-like [F... 100 2e-19
gb|EOY17786.1| Uncharacterized protein TCM_042505 [Theobroma cacao] 100 3e-19
ref|XP_004500487.1| PREDICTED: protein EARLY FLOWERING 4-like [C... 100 3e-19
ref|XP_002311221.1| hypothetical protein POPTR_0008s06820g [Popu... 100 3e-19
ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis ... 100 3e-19
ref|XP_003552375.1| PREDICTED: protein EARLY FLOWERING 4-like [G... 100 4e-19
ref|XP_002862593.1| hypothetical protein ARALYDRAFT_497391 [Arab... 100 4e-19
ref|NP_565922.1| protein EARLY FLOWERING 4 [Arabidopsis thaliana... 100 4e-19
ref|XP_006295267.1| hypothetical protein CARUB_v10024354mg [Caps... 99 9e-19
gb|ADQ20089.1| ELF4 protein [Manihot esculenta] 99 1e-18
ref|XP_006488526.1| PREDICTED: protein ELF4-LIKE 1-like isoform ... 97 3e-18
ref|XP_006488523.1| PREDICTED: protein ELF4-LIKE 1-like isoform ... 97 3e-18
>ref|XP_006411253.1| hypothetical protein EUTSA_v10017822mg [Eutrema salsugineum]
gi|557112422|gb|ESQ52706.1| hypothetical protein
EUTSA_v10017822mg [Eutrema salsugineum]
Length = 115
Score = 104 bits (260), Expect = 2e-20
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
R+F +VQSVLDRNR LIQQVNDNHQSRM +NM++NV LI+ELNGNISKVVSMYSDL TNF
Sbjct: 34 RNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVSMYSDLNTNF 93
Query: 373 SSVVQERRQG 402
SS + G
Sbjct: 94 SSAFHGAKNG 103
>gb|ACK56115.1| ELF4-like protein [Ipomoea nil]
Length = 131
Score = 103 bits (258), Expect = 3e-20
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +1
Query: 190 TRSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTN 369
++SF VQ+VLD+NR LIQQVN+NHQS++P N+ARNV LIRE+NGNISKVV MYSDL N
Sbjct: 57 SQSFRDVQTVLDQNRTLIQQVNENHQSKLPNNIARNVDLIREINGNISKVVGMYSDLSGN 116
Query: 370 FSSVVQERRQG 402
FS +V +RR G
Sbjct: 117 FSGIVHQRRSG 127
>ref|XP_002299809.2| hypothetical protein POPTR_0001s25870g [Populus trichocarpa]
gi|550348190|gb|EEE84614.2| hypothetical protein
POPTR_0001s25870g [Populus trichocarpa]
Length = 129
Score = 103 bits (256), Expect = 5e-20
Identities = 48/70 (68%), Positives = 62/70 (88%)
Frame = +1
Query: 190 TRSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTN 369
++SF +VQSVLD NR LIQQVN NHQS++P+N+ +NV LIRE+NGNISKV+S+YSDL N
Sbjct: 44 SKSFKQVQSVLDHNRDLIQQVNANHQSKIPDNLVKNVSLIREINGNISKVMSIYSDLSVN 103
Query: 370 FSSVVQERRQ 399
FS++VQERR+
Sbjct: 104 FSNIVQERRR 113
>ref|XP_006435734.1| hypothetical protein CICLE_v10032998mg [Citrus clementina]
gi|567886426|ref|XP_006435735.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
gi|567886428|ref|XP_006435736.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
gi|567886430|ref|XP_006435737.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
gi|568865932|ref|XP_006486320.1| PREDICTED: protein
EARLY FLOWERING 4-like isoform X1 [Citrus sinensis]
gi|557537930|gb|ESR48974.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
gi|557537931|gb|ESR48975.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
gi|557537932|gb|ESR48976.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
gi|557537933|gb|ESR48977.1| hypothetical protein
CICLE_v10032998mg [Citrus clementina]
Length = 148
Score = 102 bits (255), Expect = 6e-20
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +1
Query: 196 SFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFS 375
SF +VQSVLDRNRVLIQQVN+NHQS++P+NM +NV LI+ELNGNISKVVS+YSDL TNFS
Sbjct: 73 SFGQVQSVLDRNRVLIQQVNENHQSKIPDNMVKNVGLIQELNGNISKVVSLYSDLSTNFS 132
Query: 376 SVVQERRQ 399
+R +
Sbjct: 133 RAFHQRNK 140
>gb|AAQ73526.1| early flowering 4 [Mesembryanthemum crystallinum]
Length = 139
Score = 102 bits (254), Expect = 8e-20
Identities = 48/68 (70%), Positives = 59/68 (86%)
Frame = +1
Query: 196 SFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFS 375
SFS+VQSVLDRNR+LIQQ N+NHQSR+P+NM +NV +I+ELNGNISKV S+YSDL NF+
Sbjct: 57 SFSKVQSVLDRNRMLIQQANENHQSRVPDNMVKNVAIIQELNGNISKVASIYSDLSVNFT 116
Query: 376 SVVQERRQ 399
VV + RQ
Sbjct: 117 GVVGQHRQ 124
>ref|XP_002533647.1| conserved hypothetical protein [Ricinus communis]
gi|223526460|gb|EEF28735.1| conserved hypothetical
protein [Ricinus communis]
Length = 137
Score = 102 bits (253), Expect = 1e-19
Identities = 49/69 (71%), Positives = 59/69 (85%)
Frame = +1
Query: 196 SFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFS 375
+F +VQSVLDRNR LIQQVN+NHQSR+P+NM +NV LI+ELNGNISKVVS+YSDL +NFS
Sbjct: 56 TFRQVQSVLDRNRSLIQQVNENHQSRIPDNMVKNVALIQELNGNISKVVSLYSDLNSNFS 115
Query: 376 SVVQERRQG 402
S + R G
Sbjct: 116 SSYHQHRNG 124
>ref|XP_003537487.1| PREDICTED: protein EARLY FLOWERING 4-like [Glycine max]
Length = 134
Score = 101 bits (252), Expect = 1e-19
Identities = 54/117 (46%), Positives = 70/117 (59%)
Frame = +1
Query: 55 RESNNRSRYRHHQQEANRMSNGSGCMGXXXXXXXXXXXXXXXXXXTRSFSRVQSVLDRNR 234
R + R+RHH + + + F +VQSVLDRNR
Sbjct: 16 RSKKHHRRHRHHPATTTTTLSTTTGESDGEVEEAEDGDPEAWVTLNKGFRQVQSVLDRNR 75
Query: 235 VLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFSSVVQERRQGT 405
+LIQQVN+N QSRM +NM +NV LI+ELNGNISKVVS+YSDL TNFS+V Q+R + +
Sbjct: 76 LLIQQVNENQQSRMHDNMVKNVSLIQELNGNISKVVSLYSDLNTNFSNVCQQRSKNS 132
>gb|EXC09419.1| hypothetical protein L484_002382 [Morus notabilis]
Length = 115
Score = 101 bits (251), Expect = 2e-19
Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 7/82 (8%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
+SF +VQ+VLDRNR LIQQVN+NHQSR+P+NMA+NV LI+ELNGNISKVVS+YSDL +NF
Sbjct: 34 QSFRQVQTVLDRNRSLIQQVNENHQSRIPDNMAKNVALIQELNGNISKVVSLYSDLNSNF 93
Query: 373 SSVVQERRQ-------GTPAQK 417
S++ R TP+Q+
Sbjct: 94 STLFNNHRSPSTNGKPDTPSQR 115
>ref|XP_004307648.1| PREDICTED: protein EARLY FLOWERING 4-like [Fragaria vesca subsp.
vesca]
Length = 119
Score = 100 bits (250), Expect = 2e-19
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
RSF +VQ+VLDRNR LIQQVNDNHQSR+P NM +NV LI+E+NGNISKVVS+YSDL ++F
Sbjct: 46 RSFRQVQAVLDRNRALIQQVNDNHQSRIPANMVKNVALIQEINGNISKVVSLYSDLSSDF 105
Query: 373 SSVVQER 393
SSV + +
Sbjct: 106 SSVFRNK 112
>gb|EOY17786.1| Uncharacterized protein TCM_042505 [Theobroma cacao]
Length = 114
Score = 100 bits (249), Expect = 3e-19
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
+SF +VQSVLDRNR LIQQVN NHQS++P+NM +NV LI+E+NGNISKVVS+YSDL +NF
Sbjct: 34 KSFKQVQSVLDRNRALIQQVNQNHQSKIPDNMVKNVALIQEINGNISKVVSLYSDLSSNF 93
Query: 373 SSVVQER 393
S+V R
Sbjct: 94 STVFHNR 100
>ref|XP_004500487.1| PREDICTED: protein EARLY FLOWERING 4-like [Cicer arietinum]
Length = 131
Score = 100 bits (249), Expect = 3e-19
Identities = 52/122 (42%), Positives = 72/122 (59%)
Frame = +1
Query: 49 AARESNNRSRYRHHQQEANRMSNGSGCMGXXXXXXXXXXXXXXXXXXTRSFSRVQSVLDR 228
AA + + HH+ + N++ G +SF +VQSVLDR
Sbjct: 10 AAESTMEDTSNHHHRSKKNKLRRRPPTTGDSDLEEAEDGDPEVWATLNKSFRQVQSVLDR 69
Query: 229 NRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFSSVVQERRQGTP 408
NR +IQQVN+N QSRM +NM +NV LI+ELNGNISKV S+YSDL ++F+ + Q+R T
Sbjct: 70 NRAIIQQVNENQQSRMADNMVKNVSLIQELNGNISKVASLYSDLNSDFTGICQQRSSHTR 129
Query: 409 AQ 414
A+
Sbjct: 130 AK 131
>ref|XP_002311221.1| hypothetical protein POPTR_0008s06820g [Populus trichocarpa]
gi|222851041|gb|EEE88588.1| hypothetical protein
POPTR_0008s06820g [Populus trichocarpa]
Length = 122
Score = 100 bits (249), Expect = 3e-19
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = +1
Query: 196 SFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFS 375
SF +VQSVLDRNRVLIQQVN+NHQSR P+NM +NV LI+ELNGNISKVV +YSDL +NFS
Sbjct: 46 SFRQVQSVLDRNRVLIQQVNENHQSRTPDNMVKNVSLIQELNGNISKVVGLYSDLNSNFS 105
Query: 376 SVVQER 393
+ +R
Sbjct: 106 TAYHQR 111
>ref|XP_002270733.1| PREDICTED: protein EARLY FLOWERING 4 [Vitis vinifera]
gi|297736609|emb|CBI25480.3| unnamed protein product
[Vitis vinifera]
Length = 145
Score = 100 bits (249), Expect = 3e-19
Identities = 47/65 (72%), Positives = 58/65 (89%)
Frame = +1
Query: 196 SFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFS 375
SF +VQSVLDRNRVLIQQVN+NHQS++P+N+ +NV LI+E+NGNISKVVS+YSDL TNFS
Sbjct: 58 SFRQVQSVLDRNRVLIQQVNENHQSKIPDNLVKNVALIQEINGNISKVVSLYSDLSTNFS 117
Query: 376 SVVQE 390
V +
Sbjct: 118 GVFHQ 122
>ref|XP_003552375.1| PREDICTED: protein EARLY FLOWERING 4-like [Glycine max]
Length = 137
Score = 100 bits (248), Expect = 4e-19
Identities = 48/71 (67%), Positives = 61/71 (85%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
+ F +VQSVLDRNR+LIQQVN+N QSRM +NM +NV LI+ELNGNISKVVS+YSDL TNF
Sbjct: 65 KGFRQVQSVLDRNRLLIQQVNENQQSRMHDNMVKNVSLIQELNGNISKVVSLYSDLNTNF 124
Query: 373 SSVVQERRQGT 405
++V Q+R + +
Sbjct: 125 TNVCQQRSKNS 135
>ref|XP_002862593.1| hypothetical protein ARALYDRAFT_497391 [Arabidopsis lyrata subsp.
lyrata] gi|297827623|ref|XP_002881694.1| hypothetical
protein ARALYDRAFT_903274 [Arabidopsis lyrata subsp.
lyrata] gi|297308215|gb|EFH38851.1| hypothetical protein
ARALYDRAFT_497391 [Arabidopsis lyrata subsp. lyrata]
gi|297327533|gb|EFH57953.1| hypothetical protein
ARALYDRAFT_903274 [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 100 bits (248), Expect = 4e-19
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
R+F +VQSVLDRNR LIQQVNDNHQSRM +NM++NV LI+ELNGNISKVV+MYSDL T+F
Sbjct: 34 RNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNTSF 93
Query: 373 SS 378
SS
Sbjct: 94 SS 95
>ref|NP_565922.1| protein EARLY FLOWERING 4 [Arabidopsis thaliana]
gi|75096964|sp|O04211.1|ELF4_ARATH RecName: Full=Protein
EARLY FLOWERING 4; AltName: Full=Protein ARRHYTHMIC 44
gi|2088659|gb|AAB95293.1| expressed protein [Arabidopsis
thaliana] gi|14334558|gb|AAK59687.1| unknown protein
[Arabidopsis thaliana] gi|17065630|gb|AAL33809.1|
unknown protein [Arabidopsis thaliana]
gi|21618014|gb|AAM67064.1| unknown [Arabidopsis
thaliana] gi|330254679|gb|AEC09773.1| uncharacterized
protein AT2G40080 [Arabidopsis thaliana]
Length = 111
Score = 100 bits (248), Expect = 4e-19
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
R+F +VQSVLDRNR LIQQVNDNHQSRM +NM++NV LI+ELNGNISKVV+MYSDL T+F
Sbjct: 31 RNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNTSF 90
Query: 373 SS 378
SS
Sbjct: 91 SS 92
>ref|XP_006295267.1| hypothetical protein CARUB_v10024354mg [Capsella rubella]
gi|482563975|gb|EOA28165.1| hypothetical protein
CARUB_v10024354mg [Capsella rubella]
Length = 113
Score = 99.0 bits (245), Expect = 9e-19
Identities = 48/62 (77%), Positives = 57/62 (91%)
Frame = +1
Query: 193 RSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNF 372
R+F +VQSVLDRNR LIQQVNDNHQSRM +NM++NV LI+ELNGNISKVV+MYSDL T+F
Sbjct: 33 RNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNTSF 92
Query: 373 SS 378
+S
Sbjct: 93 AS 94
>gb|ADQ20089.1| ELF4 protein [Manihot esculenta]
Length = 115
Score = 98.6 bits (244), Expect = 1e-18
Identities = 47/66 (71%), Positives = 59/66 (89%)
Frame = +1
Query: 196 SFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTNFS 375
+F +VQSVLDRNR LIQQVN+NHQSR+P+NM +NV LI+ELNGNISKVVS+YSDL +NF+
Sbjct: 36 TFRQVQSVLDRNRNLIQQVNENHQSRIPDNMVKNVALIQELNGNISKVVSLYSDLNSNFT 95
Query: 376 SVVQER 393
+ Q+R
Sbjct: 96 TNYQQR 101
>ref|XP_006488526.1| PREDICTED: protein ELF4-LIKE 1-like isoform X5 [Citrus sinensis]
gi|568870680|ref|XP_006488527.1| PREDICTED: protein
ELF4-LIKE 1-like isoform X6 [Citrus sinensis]
Length = 177
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/70 (62%), Positives = 61/70 (87%)
Frame = +1
Query: 190 TRSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTN 369
++SF +VQ+VLD NR LI++VN+NH SR+P+NM++NV LIRE+NGNISKVVS+YSDL N
Sbjct: 53 SKSFKQVQTVLDNNRSLIERVNENHLSRIPDNMSKNVELIREINGNISKVVSIYSDLSAN 112
Query: 370 FSSVVQERRQ 399
F ++V +RR+
Sbjct: 113 FCNIVSQRRR 122
>ref|XP_006488523.1| PREDICTED: protein ELF4-LIKE 1-like isoform X2 [Citrus sinensis]
gi|568870674|ref|XP_006488524.1| PREDICTED: protein
ELF4-LIKE 1-like isoform X3 [Citrus sinensis]
gi|568870676|ref|XP_006488525.1| PREDICTED: protein
ELF4-LIKE 1-like isoform X4 [Citrus sinensis]
Length = 195
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/70 (62%), Positives = 61/70 (87%)
Frame = +1
Query: 190 TRSFSRVQSVLDRNRVLIQQVNDNHQSRMPENMARNVPLIRELNGNISKVVSMYSDLGTN 369
++SF +VQ+VLD NR LI++VN+NH SR+P+NM++NV LIRE+NGNISKVVS+YSDL N
Sbjct: 82 SKSFKQVQTVLDNNRSLIERVNENHLSRIPDNMSKNVELIREINGNISKVVSIYSDLSAN 141
Query: 370 FSSVVQERRQ 399
F ++V +RR+
Sbjct: 142 FCNIVSQRRR 151