BLASTX nr result
ID: Rheum21_contig00026502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026502
(399 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADD30921.1| putative RF1 protein [Plumbago auriculata] 84 4e-21
gb|ABY90326.1| Ycf1 [Fagopyrum homotropicum] 86 4e-15
gb|ABY90323.1| Ycf1 [Fagopyrum homotropicum] 86 4e-15
gb|ABY90321.1| Ycf1 [Fagopyrum tataricum] 86 4e-15
gb|ABY90320.1| Ycf1 [Fagopyrum tataricum] 86 4e-15
ref|YP_001936563.1| hypothetical chloroplast RF1 [Fagopyrum escu... 86 4e-15
ref|YP_008963365.1| hypothetical chloroplast RF19 [Camellia olei... 86 7e-15
gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis ... 86 7e-15
ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [... 86 7e-15
ref|YP_008593172.1| hypothetical chloroplast RF1 (chloroplast) [... 86 7e-15
ref|YP_008593083.1| hypothetical chloroplast RF1 (chloroplast) [... 86 7e-15
gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camel... 86 7e-15
ref|YP_008592994.1| hypothetical chloroplast RF1 (chloroplast) [... 86 7e-15
ref|YP_008592904.1| hypothetical chloroplast RF1 (chloroplast) [... 86 7e-15
ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [... 86 7e-15
ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|43... 86 7e-15
gb|ADD30914.1| putative RF1 protein [Cornus florida] 85 1e-14
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 84 1e-14
ref|YP_008563147.1| hypothetical chloroplast RF1 (chloroplast) [... 84 1e-14
ref|YP_538908.1| hypothetical chloroplast RF1 [Solanum bulbocast... 84 1e-14
>gb|ADD30921.1| putative RF1 protein [Plumbago auriculata]
Length = 2069
Score = 84.0 bits (206), Expect(2) = 4e-21
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQ 226
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+
Sbjct: 2003 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLK 2039
Score = 42.7 bits (99), Expect(2) = 4e-21
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3
Query: 196 TIYIGWINSCAHALSYILF 140
TIYIGWINSCAHALSYI F
Sbjct: 2051 TIYIGWINSCAHALSYIRF 2069
>gb|ABY90326.1| Ycf1 [Fagopyrum homotropicum]
Length = 79
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+ID
Sbjct: 41 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKID 79
>gb|ABY90323.1| Ycf1 [Fagopyrum homotropicum]
Length = 81
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+ID
Sbjct: 43 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKID 81
>gb|ABY90321.1| Ycf1 [Fagopyrum tataricum]
Length = 70
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+ID
Sbjct: 32 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKID 70
>gb|ABY90320.1| Ycf1 [Fagopyrum tataricum]
Length = 72
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+ID
Sbjct: 34 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKID 72
>ref|YP_001936563.1| hypothetical chloroplast RF1 [Fagopyrum esculentum subsp. ancestrale]
gi|189162329|ref|YP_001936575.1| hypothetical chloroplast
RF1 [Fagopyrum esculentum subsp. ancestrale]
gi|166065403|gb|ABY79778.1| hypothetical chloroplast RF1
[Fagopyrum esculentum subsp. ancestrale]
gi|166065415|gb|ABY79790.1| hypothetical chloroplast RF1
[Fagopyrum esculentum subsp. ancestrale]
Length = 1870
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+ID
Sbjct: 1832 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKID 1870
>ref|YP_008963365.1| hypothetical chloroplast RF19 [Camellia oleifera]
gi|388893354|gb|AFK81445.1| hypothetical chloroplast RF19
[Camellia oleifera]
Length = 1875
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1837 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1874
>gb|AFK81358.1| hypothetical chloroplast RF19 [Camellia sinensis var. assamica]
Length = 1875
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1837 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1874
>ref|YP_008520200.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis]
gi|537362942|gb|AGU44744.1| hypothetical chloroplast RF1
(chloroplast) [Camellia taliensis]
Length = 1869
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1831 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1868
>ref|YP_008593172.1| hypothetical chloroplast RF1 (chloroplast) [Camellia yunnanensis]
gi|537362852|gb|AGU44655.1| hypothetical chloroplast RF1
(chloroplast) [Camellia yunnanensis]
Length = 1873
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1835 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1872
>ref|YP_008593083.1| hypothetical chloroplast RF1 (chloroplast) [Camellia pitardii]
gi|537362762|gb|AGU44566.1| hypothetical chloroplast RF1
(chloroplast) [Camellia pitardii]
Length = 1871
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1833 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1870
>gb|AGU44477.1| hypothetical chloroplast RF1 (chloroplast) [Camellia taliensis]
Length = 1869
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1831 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1868
>ref|YP_008592994.1| hypothetical chloroplast RF1 (chloroplast) [Camellia impressinervis]
gi|537362582|gb|AGU44388.1| hypothetical chloroplast RF1
(chloroplast) [Camellia impressinervis]
Length = 1873
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1835 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1872
>ref|YP_008592904.1| hypothetical chloroplast RF1 (chloroplast) [Camellia danzaiensis]
gi|537362494|gb|AGU44301.1| hypothetical chloroplast RF1
(chloroplast) [Camellia danzaiensis]
Length = 1871
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1833 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1870
>ref|YP_008592818.1| hypothetical chloroplast RF1 (chloroplast) [Camellia cuspidata]
gi|537362404|gb|AGU44212.1| hypothetical chloroplast RF1
(chloroplast) [Camellia cuspidata]
Length = 1869
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1831 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1868
>ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|430728331|gb|AGA55655.1|
Ycf1 (chloroplast) [Camellia sinensis]
Length = 1873
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL+I
Sbjct: 1835 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKI 1872
>gb|ADD30914.1| putative RF1 protein [Cornus florida]
Length = 1867
Score = 84.7 bits (208), Expect = 1e-14
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRL++
Sbjct: 1829 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLKL 1866
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQI 223
WP+YRLEDLACMNRYWFDTNNGSRFSMLRIH+YPRL+I
Sbjct: 1860 WPNYRLEDLACMNRYWFDTNNGSRFSMLRIHLYPRLKI 1897
>ref|YP_008563147.1| hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
gi|118577981|sp|Q2MI42.1|YCF1_SOLLC RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|84372042|gb|ABC56359.1| hypothetical chloroplast RF1
(chloroplast) [Solanum lycopersicum]
Length = 1891
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+I+
Sbjct: 1853 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKIN 1891
>ref|YP_538908.1| hypothetical chloroplast RF1 [Solanum bulbocastanum]
gi|118577980|sp|Q2MIC9.1|YCF1_SOLBU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|84371954|gb|ABC56272.1| hypothetical chloroplast RF1
[Solanum bulbocastanum]
Length = 1887
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/39 (89%), Positives = 39/39 (100%)
Frame = -1
Query: 336 WPDYRLEDLACMNRYWFDTNNGSRFSMLRIHMYPRLQID 220
WP+YRLEDLACMNRYWFDTNNGSRFS+LRIHMYPRL+I+
Sbjct: 1849 WPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKIN 1887