BLASTX nr result

ID: Rheum21_contig00026349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00026349
         (411 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314125.2| hypothetical protein POPTR_0009s04690g [Popu...    59   5e-07
ref|XP_002520430.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    58   2e-06
gb|AAO42234.1| unknown protein [Arabidopsis thaliana]                  56   4e-06
ref|NP_195737.1| uncharacterized protein [Arabidopsis thaliana] ...    56   4e-06
gb|EXB89951.1| hypothetical protein L484_023603 [Morus notabilis]      55   7e-06
ref|XP_002299829.1| hypothetical protein POPTR_0001s25550g [Popu...    55   7e-06

>ref|XP_002314125.2| hypothetical protein POPTR_0009s04690g [Populus trichocarpa]
           gi|550331032|gb|EEE88080.2| hypothetical protein
           POPTR_0009s04690g [Populus trichocarpa]
          Length = 552

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 50/167 (29%), Positives = 65/167 (38%), Gaps = 55/167 (32%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGKALPRATTPVVSV 230
           +R  DTDPR S+D+AR SVD         S    D PRASWDG + GK  PR  TP+VSV
Sbjct: 226 RRSCDTDPRLSVDVARLSVD--------DSHYSFDEPRASWDGNLIGKTYPR-LTPLVSV 276

Query: 229 IENAMATAYG-------------------------------------------------- 200
           +E+    + G                                                  
Sbjct: 277 MEDVKLPSGGVENAKENDSLKNEGESSPGGTMLTMNYYSDRRRKSFDRSGSNRRVGLGDE 336

Query: 199 -FNSSTSASKKP----MLHDTKLLITERELMSSRMNSVKDESSVSFD 74
            F S ++A   P    + H  KLL+TE+EL  S   S+KD    + D
Sbjct: 337 EFKSMSNAKVSPETVGLFHGAKLLVTEKELRDSNWYSLKDHREENAD 383


>ref|XP_002520430.1| conserved hypothetical protein [Ricinus communis]
           gi|223540272|gb|EEF41843.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 52/167 (31%), Positives = 63/167 (37%), Gaps = 55/167 (32%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGKALPRATTPVVSV 230
           +R  DTDPR S+D+AR SVD          +   D PRASWDG + GK  PR   P+VSV
Sbjct: 250 RRSCDTDPRLSVDVARLSVD--------DVRYSFDEPRASWDGYLIGKTYPR-LAPLVSV 300

Query: 229 IENAMATAYG-------------------------------------------------- 200
           IE+A     G                                                  
Sbjct: 301 IEDAKLAGNGIENMKDNLDLKNEVETSPGGTAQTREFYSDRRRRRSFDRLGSKRRITLGD 360

Query: 199 --FNSSTSASKKP---MLHDTKLLITERELMSSRMNSVKDESSVSFD 74
             F S  +A   P   + H  KLL+TE+EL  S   SVKD    S D
Sbjct: 361 DEFKSILNAKVSPEIGLFHGAKLLVTEKELRDSNWYSVKDYHGESTD 407


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGKALPRATTPVVSV 230
           +R  DTDPR S+D  R S+D         S+   D PRASWDG + GK  PR  TP+VSV
Sbjct: 240 RRSCDTDPRFSVDAGRMSLD--------DSRYSFDEPRASWDGYLIGKTYPR-ITPMVSV 290

Query: 229 IENAMATAYGF---NSSTSASKKPM 164
           +E A  +  GF   + S  A   PM
Sbjct: 291 LEEAKFSGTGFEKDDPSDEAEGSPM 315


>gb|AAO42234.1| unknown protein [Arabidopsis thaliana]
          Length = 568

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGK-ALPRATTP--V 239
           +R  DTDPR SLD  R SVD  G+   + S+  LD PRASWDG + G+    R   P  +
Sbjct: 266 RRSSDTDPRFSLDAGRFSVDI-GRISMDDSRYSLDEPRASWDGHLIGRTTAARVPLPPSM 324

Query: 238 VSVIENAMATAYGFNSSTSASKKPMLHDTKLLI 140
           +SV+ENA          +S S KP+  D+  +I
Sbjct: 325 LSVVENAPLNRSDMQIPSSPSIKPISGDSDPII 357


>ref|NP_195737.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6759440|emb|CAB69845.1| putative protein [Arabidopsis
           thaliana] gi|53850563|gb|AAU95458.1| At5g01170
           [Arabidopsis thaliana] gi|332002923|gb|AED90306.1|
           uncharacterized protein AT5G01170 [Arabidopsis thaliana]
          Length = 568

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGK-ALPRATTP--V 239
           +R  DTDPR SLD  R SVD  G+   + S+  LD PRASWDG + G+    R   P  +
Sbjct: 266 RRSSDTDPRFSLDAGRFSVDI-GRISMDDSRYSLDEPRASWDGHLIGRTTAARVPLPPSM 324

Query: 238 VSVIENAMATAYGFNSSTSASKKPMLHDTKLLI 140
           +SV+ENA          +S S KP+  D+  +I
Sbjct: 325 LSVVENAPLNRSDMQIPSSPSIKPISGDSDPII 357


>gb|EXB89951.1| hypothetical protein L484_023603 [Morus notabilis]
          Length = 656

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/82 (39%), Positives = 45/82 (54%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGKALPRATTPVVSV 230
           +R  DTDPR SLD  R S+D      ++P +   D PRASWDG + G+  PR  T +VSV
Sbjct: 334 RRSCDTDPRFSLDAGRMSLDAGRISFDDP-RYSFDEPRASWDGYLIGRTFPRMPT-MVSV 391

Query: 229 IENAMATAYGFNSSTSASKKPM 164
           +E+A       + +    + PM
Sbjct: 392 VEDAPVVPVSRSDTQIPVEDPM 413


>ref|XP_002299829.1| hypothetical protein POPTR_0001s25550g [Populus trichocarpa]
           gi|222847087|gb|EEE84634.1| hypothetical protein
           POPTR_0001s25550g [Populus trichocarpa]
          Length = 553

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/63 (50%), Positives = 39/63 (61%)
 Frame = -3

Query: 409 KRFFDTDPRCSLDLARASVDCSGKRIEEPSQRCLDPPRASWDGRMNGKALPRATTPVVSV 230
           +R  DTDPR S+D AR SVD         S+   D PRASWDG + GK  PR  TP+VSV
Sbjct: 229 RRSCDTDPRLSVDAARLSVD--------DSRYSFDEPRASWDGYLIGKTYPR-LTPLVSV 279

Query: 229 IEN 221
           +E+
Sbjct: 280 LED 282


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