BLASTX nr result

ID: Rheum21_contig00026324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00026324
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352901.1| PREDICTED: programmed cell death protein 2-l...    47   1e-09
ref|XP_006396428.1| hypothetical protein EUTSA_v10028689mg [Eutr...    44   6e-09
tpg|DAA44933.1| TPA: hypothetical protein ZEAMMB73_938601 [Zea m...    45   4e-07

>ref|XP_006352901.1| PREDICTED: programmed cell death protein 2-like isoform X1 [Solanum
           tuberosum] gi|565372645|ref|XP_006352902.1| PREDICTED:
           programmed cell death protein 2-like isoform X2 [Solanum
           tuberosum]
          Length = 424

 Score = 46.6 bits (109), Expect(2) = 1e-09
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +2

Query: 122 QVYAPISNKEPSLHLVLFTF--TSMTCLLRDQQ*QCRHDPHKSSRRYLLNC 268
           QVYAP++ K+ + H  LF F  TSMTCLL+DQ  Q + +  K SR   + C
Sbjct: 114 QVYAPLTEKDSTFHRTLFLFMCTSMTCLLKDQHEQWKRNLDKQSRSVKVFC 164



 Score = 42.4 bits (98), Expect(2) = 1e-09
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +1

Query: 373 SVNV*CCQLPRTNQFYSSNPSKYDGTNRPLESG 471
           SV V CCQLPR N FYSS P + +G ++P   G
Sbjct: 159 SVKVFCCQLPRDNSFYSSEPPRNNGKDKPSSPG 191


>ref|XP_006396428.1| hypothetical protein EUTSA_v10028689mg [Eutrema salsugineum]
           gi|557097445|gb|ESQ37881.1| hypothetical protein
           EUTSA_v10028689mg [Eutrema salsugineum]
          Length = 419

 Score = 44.3 bits (103), Expect(2) = 6e-09
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +2

Query: 122 QVYAPISNKEPSLHLVLFTFT--SMTCLLRDQQ*QCRHDPHKSSR 250
           Q+YAPI++KE + H  LF F   SM+CLLRDQ  Q +  P K  R
Sbjct: 108 QLYAPITDKESAFHRTLFLFMCPSMSCLLRDQHEQWKRAPEKVMR 152



 Score = 42.0 bits (97), Expect(2) = 6e-09
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +1

Query: 364 LISSVNV*CCQLPRTNQFYSSNPSKYDGTNRPLESG 471
           ++ S+ V  CQLPR N FYSS   K+DGT++PL  G
Sbjct: 150 VMRSMKVFRCQLPRVNPFYSSEAPKHDGTDKPLGLG 185


>tpg|DAA44933.1| TPA: hypothetical protein ZEAMMB73_938601 [Zea mays]
          Length = 420

 Score = 44.7 bits (104), Expect(2) = 4e-07
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 364 LISSVNV*CCQLPRTNQFYSSNPSKYDGTNRPLESGCN 477
           L SSV V  CQLPRTN FYS+ P K+D +++PL  G +
Sbjct: 154 LCSSVKVFRCQLPRTNAFYSAQPPKHDRSDKPLCPGAH 191



 Score = 35.4 bits (80), Expect(2) = 4e-07
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 122 QVYAPISNKEPSLHLVLFTFT--SMTCLLRDQQ*QCRHDPHKSSRRYLLNCYWLFK 283
           Q+YA + +   + H  LF F   SM CLLRDQ  Q +H      R  L +   +F+
Sbjct: 107 QIYAAVEDNVAAFHRTLFMFMCPSMACLLRDQHEQWKHKHGNPCRSGLCSSVKVFR 162


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