BLASTX nr result
ID: Rheum21_contig00026192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00026192
(228 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB81315.1| hypothetical protein L484_005753 [Morus notabilis] 75 7e-12
ref|XP_006423385.1| hypothetical protein CICLE_v10028132mg [Citr... 74 2e-11
ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_006423384.1| hypothetical protein CICLE_v10030265mg, part... 72 6e-11
gb|EPS57980.1| hypothetical protein M569_16837, partial [Genlise... 72 1e-10
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat... 72 1e-10
emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera] 72 1e-10
ref|XP_006487352.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana] 71 2e-10
ref|NP_172730.3| RNA processing factor1 [Arabidopsis thaliana] g... 71 2e-10
emb|CAR70004.1| pentatricopeptide repeat(PPR)-containing protein... 71 2e-10
sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide... 71 2e-10
ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arab... 70 2e-10
emb|CBI34156.3| unnamed protein product [Vitis vinifera] 70 3e-10
emb|CBI35192.3| unnamed protein product [Vitis vinifera] 70 3e-10
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
>gb|EXB81315.1| hypothetical protein L484_005753 [Morus notabilis]
Length = 549
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/72 (52%), Positives = 49/72 (68%)
Frame = +2
Query: 5 NLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVT 184
N S AF +L+ G+ P+I ++TSLIKGL +E+K EA+ LY M +LG C P VVT
Sbjct: 59 NRVSDAFVVVGSMLRRGFSPNIVSYTSLIKGLFMEEKIFEAIRLYKNMFKLG-CKPTVVT 117
Query: 185 YNCLIDGLCRSG 220
Y LIDGLCR+G
Sbjct: 118 YGTLIDGLCRTG 129
>ref|XP_006423385.1| hypothetical protein CICLE_v10028132mg [Citrus clementina]
gi|557525319|gb|ESR36625.1| hypothetical protein
CICLE_v10028132mg [Citrus clementina]
Length = 548
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +2
Query: 14 SAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNC 193
S F F IL++ + P++ TFTSLIKGL E + VEA L++K+ G C PNV+TYN
Sbjct: 63 SLGFVIFGRILRSCFAPNVVTFTSLIKGLCAESRIVEAAALFTKLKAFG-CEPNVITYNT 121
Query: 194 LIDGLCRSG 220
LI+GLCR+G
Sbjct: 122 LINGLCRTG 130
>ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N + +A A I++ GY PD+ TFT+LIKGL +E + +EA L+ +M +LG CTPNVV
Sbjct: 139 VNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG-CTPNVV 197
Query: 182 TYNCLIDGLCRSG 220
TY LI GLC G
Sbjct: 198 TYGTLIKGLCALG 210
>ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +2
Query: 26 SAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLIDG 205
SA A I++ GY PD+ T+TSLIKGL +E + EA L+ +M +LG C PNVVTY LI G
Sbjct: 147 SAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG-CWPNVVTYGTLIKG 205
Query: 206 LCRSG 220
LCR+G
Sbjct: 206 LCRTG 210
>ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N S A +A A IL+ GY P++ T+T+LIKGL +E + EA L+ +M +LG CTPN V
Sbjct: 139 VNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG-CTPNAV 197
Query: 182 TYNCLIDGLCRSG 220
TY LI GLC++G
Sbjct: 198 TYGTLIKGLCQTG 210
>ref|XP_006423384.1| hypothetical protein CICLE_v10030265mg, partial [Citrus clementina]
gi|557525318|gb|ESR36624.1| hypothetical protein
CICLE_v10030265mg, partial [Citrus clementina]
Length = 278
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +2
Query: 14 SAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNC 193
S F IL++ + PD+ TFTSLIKGL E + EA L++K+ G+C P+ +TYN
Sbjct: 88 SHGFVVLGRILRSCFTPDVVTFTSLIKGLCAESRITEAAALFTKLRVFGFCKPDAITYNT 147
Query: 194 LIDGLCRSG 220
+IDGLC+ G
Sbjct: 148 IIDGLCKQG 156
>gb|EPS57980.1| hypothetical protein M569_16837, partial [Genlisea aurea]
Length = 392
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/67 (50%), Positives = 53/67 (79%)
Frame = +2
Query: 20 AFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLI 199
AFS ILK G+ P++ TFT+LIKGL+ E+KAV+A+ L+ K+I +G+ +PN+ T++ L+
Sbjct: 16 AFSVLGGILKRGHEPNLITFTTLIKGLLSERKAVDAVSLFEKVIGMGF-SPNIHTWSILM 74
Query: 200 DGLCRSG 220
+GLCR+G
Sbjct: 75 NGLCRNG 81
>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N AFSA A ILK G+ PD TFT+LI+GL +E K EAL L+ KMI G+ PNVV
Sbjct: 118 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF-QPNVV 176
Query: 182 TYNCLIDGLCRSG 220
TY LI+GLC+ G
Sbjct: 177 TYGTLINGLCKVG 189
>emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N AFSA A ILK G+ PD TFT+LI+GL +E K EAL L+ KMI G+ PNVV
Sbjct: 118 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF-QPNVV 176
Query: 182 TYNCLIDGLCRSG 220
TY LI+GLC+ G
Sbjct: 177 TYGTLINGLCKVG 189
>ref|XP_006487352.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Citrus sinensis]
Length = 649
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +2
Query: 14 SAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNC 193
S F F IL++ + PD TFTSLIKGL E + +EA L++K+ G C PNV+TY+
Sbjct: 159 SLGFVIFGRILRSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLKAFG-CEPNVITYST 217
Query: 194 LIDGLCRSG 220
LI+GLCR+G
Sbjct: 218 LINGLCRTG 226
>ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +2
Query: 23 FSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLID 202
F+AFA IL+ GY P+I T+ +LIKGL +E + EA L+ +M +LG CTP+VVTY LI
Sbjct: 124 FAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG-CTPDVVTYGTLIK 182
Query: 203 GLCRSG 220
GLC +G
Sbjct: 183 GLCGTG 188
>ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +2
Query: 23 FSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLID 202
F+AFA IL+ GY P+I T+ +LIKGL +E + EA L+ +M +LG CTP+VVTY LI
Sbjct: 124 FAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG-CTPDVVTYGTLIK 182
Query: 203 GLCRSG 220
GLC +G
Sbjct: 183 GLCGTG 188
>gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 20 AFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLI 199
A+S ++K GY PD TF +LIKGL LE K EA+ L +M++ G C P+VVTYN ++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIV 190
Query: 200 DGLCRSG 220
+G+CRSG
Sbjct: 191 NGICRSG 197
>ref|NP_172730.3| RNA processing factor1 [Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| RNA processing factor1
[Arabidopsis thaliana]
Length = 735
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 20 AFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLI 199
A+S ++K GY PD TF +LIKGL LE K EA+ L +M++ G C P+VVTYN ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIV 200
Query: 200 DGLCRSG 220
+G+CRSG
Sbjct: 201 NGICRSG 207
>emb|CAR70004.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 278
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 20 AFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLI 199
A+S ++K GY PD TF +LIKGL LE K EA+ L +M++ G C P+VVTYN ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIV 200
Query: 200 DGLCRSG 220
+G+CRSG
Sbjct: 201 NGICRSG 207
>sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 20 AFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLI 199
A+S ++K GY PD TF +LIKGL LE K EA+ L +M++ G C P+VVTYN ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIV 200
Query: 200 DGLCRSG 220
+G+CRSG
Sbjct: 201 NGICRSG 207
>ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata] gi|297338544|gb|EFH68961.1| hypothetical protein
ARALYDRAFT_471420 [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +2
Query: 20 AFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVVTYNCLI 199
A+S ++K GY PD TF +LI GL LE K EA+ L ++M++ G C PNVVTYN ++
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG-CQPNVVTYNSIV 177
Query: 200 DGLCRSG 220
+G+C+SG
Sbjct: 178 NGICKSG 184
>emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/73 (54%), Positives = 49/73 (67%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N AFS A ILK G+ PD TFT+LI+GL +E K EAL L+ KMI G+ PNVV
Sbjct: 93 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF-QPNVV 151
Query: 182 TYNCLIDGLCRSG 220
TY LI+GLC+ G
Sbjct: 152 TYGTLINGLCKVG 164
>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/71 (56%), Positives = 49/71 (69%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N AFSA A ILK G+ PD TFT+LI+GL +E K EAL L+ KMI G+ PNVV
Sbjct: 93 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF-QPNVV 151
Query: 182 TYNCLIDGLCR 214
TY LI+GLC+
Sbjct: 152 TYGTLINGLCK 162
>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/73 (54%), Positives = 49/73 (67%)
Frame = +2
Query: 2 MNLGSAAFSAFALILKNGYCPDIFTFTSLIKGLILEKKAVEALGLYSKMIQLGWCTPNVV 181
+N AFS A ILK G+ PD TFT+LI+GL +E K EAL L+ KMI G+ PNVV
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF-QPNVV 162
Query: 182 TYNCLIDGLCRSG 220
TY LI+GLC+ G
Sbjct: 163 TYGTLINGLCKVG 175