BLASTX nr result

ID: Rheum21_contig00025975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025975
         (230 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006451474.1| hypothetical protein CICLE_v10008090mg [Citr...    57   3e-06
ref|XP_006451473.1| hypothetical protein CICLE_v10008090mg [Citr...    57   3e-06
ref|XP_006451472.1| hypothetical protein CICLE_v10008090mg [Citr...    57   3e-06
ref|XP_002886035.1| hypothetical protein ARALYDRAFT_899930 [Arab...    56   6e-06
gb|EMJ03151.1| hypothetical protein PRUPE_ppa004586mg [Prunus pe...    55   7e-06
ref|XP_004235600.1| PREDICTED: WD-40 repeat-containing protein M...    55   7e-06
ref|XP_006342986.1| PREDICTED: WD-40 repeat-containing protein M...    55   1e-05

>ref|XP_006451474.1| hypothetical protein CICLE_v10008090mg [Citrus clementina]
           gi|568843093|ref|XP_006475456.1| PREDICTED: WD-40
           repeat-containing protein MSI4-like [Citrus sinensis]
           gi|557554700|gb|ESR64714.1| hypothetical protein
           CICLE_v10008090mg [Citrus clementina]
          Length = 496

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = +1

Query: 34  KKDKSFQPPSED*TGDTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLVWPSLSCR 210
           K+DK  +P  ++    T  +R       D+ Y   KS+VP L DWLA HNLVWPSLSCR
Sbjct: 16  KEDKKDEPKMKE---STTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCR 71


>ref|XP_006451473.1| hypothetical protein CICLE_v10008090mg [Citrus clementina]
           gi|557554699|gb|ESR64713.1| hypothetical protein
           CICLE_v10008090mg [Citrus clementina]
          Length = 448

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = +1

Query: 34  KKDKSFQPPSED*TGDTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLVWPSLSCR 210
           K+DK  +P  ++    T  +R       D+ Y   KS+VP L DWLA HNLVWPSLSCR
Sbjct: 16  KEDKKDEPKMKE---STTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCR 71


>ref|XP_006451472.1| hypothetical protein CICLE_v10008090mg [Citrus clementina]
           gi|557554698|gb|ESR64712.1| hypothetical protein
           CICLE_v10008090mg [Citrus clementina]
          Length = 490

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = +1

Query: 34  KKDKSFQPPSED*TGDTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLVWPSLSCR 210
           K+DK  +P  ++    T  +R       D+ Y   KS+VP L DWLA HNLVWPSLSCR
Sbjct: 16  KEDKKDEPKMKE---STTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCR 71


>ref|XP_002886035.1| hypothetical protein ARALYDRAFT_899930 [Arabidopsis lyrata subsp.
           lyrata] gi|297331875|gb|EFH62294.1| hypothetical protein
           ARALYDRAFT_899930 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
 Frame = +1

Query: 37  KDKSFQPPSED*TG----DTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLVWPSLS 204
           KD S  P S+  +G    ++  +   TP V DE Y Q K +VP L DWLA HNLVWPSLS
Sbjct: 35  KDYSQTPSSQQQSGGKMKESGKKTQQTPSV-DEKYSQWKGLVPILYDWLANHNLVWPSLS 93

Query: 205 CR 210
           CR
Sbjct: 94  CR 95


>gb|EMJ03151.1| hypothetical protein PRUPE_ppa004586mg [Prunus persica]
          Length = 502

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/67 (44%), Positives = 37/67 (55%)
 Frame = +1

Query: 10  VGKKRE*LKKDKSFQPPSED*TGDTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLV 189
           V KK    +K K  +   +D       ++A      D+ Y Q KS+VP L DWLA HNLV
Sbjct: 13  VKKKETRGRKPKPKEEKKDDQQQQAKMKKAHQQATVDDKYTQWKSLVPVLYDWLANHNLV 72

Query: 190 WPSLSCR 210
           WPSLSCR
Sbjct: 73  WPSLSCR 79


>ref|XP_004235600.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Solanum
           lycopersicum]
          Length = 460

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/44 (56%), Positives = 29/44 (65%)
 Frame = +1

Query: 79  DTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLVWPSLSCR 210
           D  ++    P   DE Y Q KS+VP L DWLA HNL+WPSLSCR
Sbjct: 3   DKTEKAGEQPPTVDERYTQWKSLVPVLYDWLANHNLLWPSLSCR 46


>ref|XP_006342986.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Solanum
           tuberosum]
          Length = 460

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/44 (56%), Positives = 29/44 (65%)
 Frame = +1

Query: 79  DTNDERAVTPRVADEMYIQ*KSIVPFL*DWLAIHNLVWPSLSCR 210
           D  ++    P   DE Y Q KS+VP L DWLA HNL+WPSLSCR
Sbjct: 3   DKTEKPGQQPPTVDERYTQWKSLVPVLYDWLANHNLLWPSLSCR 46


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