BLASTX nr result
ID: Rheum21_contig00025940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00025940 (312 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32560.3| unnamed protein product [Vitis vinifera] 80 3e-13 ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat... 80 3e-13 ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-12 ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 77 3e-12 ref|XP_003539025.2| PREDICTED: putative pentatricopeptide repeat... 74 2e-11 gb|EOX98572.1| Tetratricopeptide repeat-like superfamily protein... 72 6e-11 ref|XP_002313059.2| hypothetical protein POPTR_0009s11640g [Popu... 72 1e-10 gb|ESW03867.1| hypothetical protein PHAVU_011G048400g [Phaseolus... 71 2e-10 ref|XP_002306089.2| hypothetical protein POPTR_0004s15930g [Popu... 70 2e-10 ref|XP_002306087.2| hypothetical protein POPTR_0004s15870g [Popu... 70 2e-10 ref|XP_006487202.1| PREDICTED: uncharacterized protein LOC102624... 70 4e-10 ref|XP_006423213.1| hypothetical protein CICLE_v10029894mg [Citr... 70 4e-10 ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312... 70 4e-10 ref|NP_001078182.2| pentatricopeptide repeat-containing protein ... 67 2e-09 ref|XP_006406558.1| hypothetical protein EUTSA_v10020206mg [Eutr... 67 2e-09 ref|XP_006297125.1| hypothetical protein CARUB_v10013125mg [Caps... 67 2e-09 ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arab... 67 2e-09 ref|XP_004507434.1| PREDICTED: putative pentatricopeptide repeat... 66 5e-09 ref|XP_002519085.1| pentatricopeptide repeat-containing protein,... 65 7e-09 ref|XP_006854163.1| hypothetical protein AMTR_s00048p00191570 [A... 65 9e-09 >emb|CBI32560.3| unnamed protein product [Vitis vinifera] Length = 553 Score = 80.1 bits (196), Expect = 3e-13 Identities = 35/58 (60%), Positives = 45/58 (77%) Frame = +3 Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKNR 311 H+H +K G ST+F+ NQLIHLY++ G L +A KLFDEM ERNVFTWN II ++IK + Sbjct: 11 HAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQ 68 >ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g18840-like [Vitis vinifera] Length = 670 Score = 80.1 bits (196), Expect = 3e-13 Identities = 35/58 (60%), Positives = 45/58 (77%) Frame = +3 Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKNR 311 H+H +K G ST+F+ NQLIHLY++ G L +A KLFDEM ERNVFTWN II ++IK + Sbjct: 11 HAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQ 68 >ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g18840-like [Cucumis sativus] Length = 1096 Score = 77.0 bits (188), Expect = 2e-12 Identities = 37/61 (60%), Positives = 45/61 (73%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 LL H +K G TIF NQLI YA+ GLL DAQKLFDEM ERNVF+WN IIA+++K+ Sbjct: 431 LLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKS 490 Query: 309 R 311 + Sbjct: 491 Q 491 >ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g18840-like [Cucumis sativus] Length = 1096 Score = 76.6 bits (187), Expect = 3e-12 Identities = 37/60 (61%), Positives = 44/60 (73%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 LL H +K G TIF NQLI YA+ GLL DAQKLFDEM ERNVF+WN IIA+++K+ Sbjct: 431 LLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKS 490 >ref|XP_003539025.2| PREDICTED: putative pentatricopeptide repeat-containing protein At3g18840-like [Glycine max] Length = 692 Score = 74.3 bits (181), Expect = 2e-11 Identities = 34/61 (55%), Positives = 44/61 (72%) Frame = +3 Query: 123 MNLLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHI 302 M L H +K G +S+IF+ NQLIHLY+ GLL++A KLFDEM NVF+WN II ++I Sbjct: 12 MVYLDHVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYI 71 Query: 303 K 305 K Sbjct: 72 K 72 >gb|EOX98572.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao] Length = 1158 Score = 72.4 bits (176), Expect = 6e-11 Identities = 32/61 (52%), Positives = 46/61 (75%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 L+ H +K + + NQLIHLY++ GL+ +AQKLFDEM ERNVF+WNTII+++IK+ Sbjct: 397 LILHVQAIKASFTPSTLTSNQLIHLYSKHGLIHEAQKLFDEMPERNVFSWNTIISAYIKS 456 Query: 309 R 311 + Sbjct: 457 Q 457 >ref|XP_002313059.2| hypothetical protein POPTR_0009s11640g [Populus trichocarpa] gi|550331529|gb|EEE87014.2| hypothetical protein POPTR_0009s11640g [Populus trichocarpa] Length = 677 Score = 71.6 bits (174), Expect = 1e-10 Identities = 31/66 (46%), Positives = 47/66 (71%) Frame = +3 Query: 114 SNEMNLLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIA 293 S + L+ H +K G I + NQLIHLY++ L+ +AQKLFDEM RN+++WNTII+ Sbjct: 3 SLRVGLIHHVRSIKSGFTLPILTSNQLIHLYSKHCLINEAQKLFDEMPRRNIYSWNTIIS 62 Query: 294 SHIKNR 311 +H+K++ Sbjct: 63 AHVKSQ 68 >gb|ESW03867.1| hypothetical protein PHAVU_011G048400g [Phaseolus vulgaris] Length = 691 Score = 70.9 bits (172), Expect = 2e-10 Identities = 31/56 (55%), Positives = 42/56 (75%) Frame = +3 Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 H +K G +S+IF+ NQLIHLY+ GLL++A KLFDE+ NVF+WN II ++IK Sbjct: 17 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEIPHPNVFSWNVIIMAYIK 72 >ref|XP_002306089.2| hypothetical protein POPTR_0004s15930g [Populus trichocarpa] gi|550341127|gb|EEE86600.2| hypothetical protein POPTR_0004s15930g [Populus trichocarpa] Length = 677 Score = 70.5 bits (171), Expect = 2e-10 Identities = 30/61 (49%), Positives = 45/61 (73%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 L+ H +K G I + NQL+HLY++ L+ +AQKLFDEM +RN ++WNTII++HIK+ Sbjct: 8 LMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIISAHIKS 67 Query: 309 R 311 + Sbjct: 68 Q 68 >ref|XP_002306087.2| hypothetical protein POPTR_0004s15870g [Populus trichocarpa] gi|550341121|gb|EEE86598.2| hypothetical protein POPTR_0004s15870g [Populus trichocarpa] Length = 677 Score = 70.5 bits (171), Expect = 2e-10 Identities = 30/61 (49%), Positives = 45/61 (73%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 L+ H +K G I + NQL+HLY++ L+ +AQKLFDEM +RN ++WNTII++HIK+ Sbjct: 8 LMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIISAHIKS 67 Query: 309 R 311 + Sbjct: 68 Q 68 >ref|XP_006487202.1| PREDICTED: uncharacterized protein LOC102624533 [Citrus sinensis] Length = 1133 Score = 69.7 bits (169), Expect = 4e-10 Identities = 31/60 (51%), Positives = 45/60 (75%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 L+ H +K G T + NQLIH+Y++ LL++++KLFDEM ERNVF+WNTII++ IK+ Sbjct: 452 LICHVQAIKAGMRLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 511 >ref|XP_006423213.1| hypothetical protein CICLE_v10029894mg [Citrus clementina] gi|557525147|gb|ESR36453.1| hypothetical protein CICLE_v10029894mg [Citrus clementina] Length = 676 Score = 69.7 bits (169), Expect = 4e-10 Identities = 31/60 (51%), Positives = 45/60 (75%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 L+ H +K G T + NQLIH+Y++ LL++++KLFDEM ERNVF+WNTII++ IK+ Sbjct: 10 LICHVQAIKAGMRLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 69 >ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca subsp. vesca] Length = 2277 Score = 69.7 bits (169), Expect = 4e-10 Identities = 32/61 (52%), Positives = 45/61 (73%) Frame = +3 Query: 126 NLLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 +L+SH +K G IF+ NQLIHLY++ GL + AQ LFDEM RNV+++N II++HIK Sbjct: 1599 SLISHVRSIKSGLSLPIFTSNQLIHLYSRHGLTQHAQHLFDEMPHRNVYSYNAIISTHIK 1658 Query: 306 N 308 + Sbjct: 1659 S 1659 >ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g18840 gi|9294693|dbj|BAB03093.1| unnamed protein product [Arabidopsis thaliana] gi|332642633|gb|AEE76154.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 678 Score = 67.4 bits (163), Expect = 2e-09 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +3 Query: 132 LSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 L H +K G+ T S NQL++LY++ GLL++A+ +FDEM ERNV++WN +IA+++K Sbjct: 9 LHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66 >ref|XP_006406558.1| hypothetical protein EUTSA_v10020206mg [Eutrema salsugineum] gi|557107704|gb|ESQ48011.1| hypothetical protein EUTSA_v10020206mg [Eutrema salsugineum] Length = 678 Score = 67.4 bits (163), Expect = 2e-09 Identities = 27/58 (46%), Positives = 44/58 (75%) Frame = +3 Query: 132 LSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 L H+ +K G T S NQL++LY++ GLL++A+ +FDEM ERNV++WN +I++++K Sbjct: 9 LHHTRSIKNGLTLTAISSNQLVNLYSRNGLLREARNVFDEMPERNVYSWNAVISAYVK 66 >ref|XP_006297125.1| hypothetical protein CARUB_v10013125mg [Capsella rubella] gi|482565834|gb|EOA30023.1| hypothetical protein CARUB_v10013125mg [Capsella rubella] Length = 678 Score = 67.4 bits (163), Expect = 2e-09 Identities = 28/60 (46%), Positives = 46/60 (76%) Frame = +3 Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 +L H +K G+ T S NQL++LYA+ GLL++A+ +FDEM ERNV++WN +I++++K+ Sbjct: 8 VLHHIRSIKTGSTLTAVSSNQLVNLYAKNGLLREARNVFDEMPERNVYSWNAVISAYLKS 67 >ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp. lyrata] gi|297328994|gb|EFH59413.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp. lyrata] Length = 614 Score = 67.4 bits (163), Expect = 2e-09 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +3 Query: 132 LSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 L H +K G+ T S NQL++LY++ GLL++A+ +FDEM ERNV++WN +IA+++K Sbjct: 9 LHHIRSIKTGSTLTTISSNQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAAYVK 66 >ref|XP_004507434.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g18840-like [Cicer arietinum] Length = 688 Score = 65.9 bits (159), Expect = 5e-09 Identities = 30/56 (53%), Positives = 39/56 (69%) Frame = +3 Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 H +K G S IF+ N+LI LY+ GLL+DA KLFDEM NVF+WN +I ++IK Sbjct: 15 HVQAIKSGFASCIFTSNKLIRLYSNHGLLQDAHKLFDEMPHPNVFSWNALIMAYIK 70 >ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1157 Score = 65.5 bits (158), Expect = 7e-09 Identities = 27/49 (55%), Positives = 40/49 (81%) Frame = +3 Query: 159 GTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305 G I +F+ N+LIHLY++ GL ++A+ LFDEM E+NVF+WN II++HI+ Sbjct: 492 GCILPVFTSNKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIR 540 >ref|XP_006854163.1| hypothetical protein AMTR_s00048p00191570 [Amborella trichopoda] gi|548857832|gb|ERN15630.1| hypothetical protein AMTR_s00048p00191570 [Amborella trichopoda] Length = 712 Score = 65.1 bits (157), Expect = 9e-09 Identities = 27/57 (47%), Positives = 44/57 (77%) Frame = +3 Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308 H+HI+K +TIF++NQLI +Y + + +A++LF+EM ++NVF+WNT+I +IKN Sbjct: 12 HTHIIKTSLPTTIFTYNQLIEVYFKNTYIGEARQLFNEMPQKNVFSWNTMINGYIKN 68