BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025940
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32560.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...    80   3e-13
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...    77   2e-12
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    77   3e-12
ref|XP_003539025.2| PREDICTED: putative pentatricopeptide repeat...    74   2e-11
gb|EOX98572.1| Tetratricopeptide repeat-like superfamily protein...    72   6e-11
ref|XP_002313059.2| hypothetical protein POPTR_0009s11640g [Popu...    72   1e-10
gb|ESW03867.1| hypothetical protein PHAVU_011G048400g [Phaseolus...    71   2e-10
ref|XP_002306089.2| hypothetical protein POPTR_0004s15930g [Popu...    70   2e-10
ref|XP_002306087.2| hypothetical protein POPTR_0004s15870g [Popu...    70   2e-10
ref|XP_006487202.1| PREDICTED: uncharacterized protein LOC102624...    70   4e-10
ref|XP_006423213.1| hypothetical protein CICLE_v10029894mg [Citr...    70   4e-10
ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312...    70   4e-10
ref|NP_001078182.2| pentatricopeptide repeat-containing protein ...    67   2e-09
ref|XP_006406558.1| hypothetical protein EUTSA_v10020206mg [Eutr...    67   2e-09
ref|XP_006297125.1| hypothetical protein CARUB_v10013125mg [Caps...    67   2e-09
ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arab...    67   2e-09
ref|XP_004507434.1| PREDICTED: putative pentatricopeptide repeat...    66   5e-09
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,...    65   7e-09
ref|XP_006854163.1| hypothetical protein AMTR_s00048p00191570 [A...    65   9e-09

>emb|CBI32560.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 35/58 (60%), Positives = 45/58 (77%)
 Frame = +3

Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKNR 311
           H+H +K G  ST+F+ NQLIHLY++ G L +A KLFDEM ERNVFTWN II ++IK +
Sbjct: 11  HAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQ 68


>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 35/58 (60%), Positives = 45/58 (77%)
 Frame = +3

Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKNR 311
           H+H +K G  ST+F+ NQLIHLY++ G L +A KLFDEM ERNVFTWN II ++IK +
Sbjct: 11  HAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQ 68


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Cucumis sativus]
          Length = 1096

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           LL H   +K G   TIF  NQLI  YA+ GLL DAQKLFDEM ERNVF+WN IIA+++K+
Sbjct: 431 LLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKS 490

Query: 309 R 311
           +
Sbjct: 491 Q 491


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g18840-like [Cucumis
           sativus]
          Length = 1096

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           LL H   +K G   TIF  NQLI  YA+ GLL DAQKLFDEM ERNVF+WN IIA+++K+
Sbjct: 431 LLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKS 490


>ref|XP_003539025.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 692

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = +3

Query: 123 MNLLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHI 302
           M  L H   +K G +S+IF+ NQLIHLY+  GLL++A KLFDEM   NVF+WN II ++I
Sbjct: 12  MVYLDHVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYI 71

Query: 303 K 305
           K
Sbjct: 72  K 72


>gb|EOX98572.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 1158

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/61 (52%), Positives = 46/61 (75%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           L+ H   +K     +  + NQLIHLY++ GL+ +AQKLFDEM ERNVF+WNTII+++IK+
Sbjct: 397 LILHVQAIKASFTPSTLTSNQLIHLYSKHGLIHEAQKLFDEMPERNVFSWNTIISAYIKS 456

Query: 309 R 311
           +
Sbjct: 457 Q 457


>ref|XP_002313059.2| hypothetical protein POPTR_0009s11640g [Populus trichocarpa]
           gi|550331529|gb|EEE87014.2| hypothetical protein
           POPTR_0009s11640g [Populus trichocarpa]
          Length = 677

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 31/66 (46%), Positives = 47/66 (71%)
 Frame = +3

Query: 114 SNEMNLLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIA 293
           S  + L+ H   +K G    I + NQLIHLY++  L+ +AQKLFDEM  RN+++WNTII+
Sbjct: 3   SLRVGLIHHVRSIKSGFTLPILTSNQLIHLYSKHCLINEAQKLFDEMPRRNIYSWNTIIS 62

Query: 294 SHIKNR 311
           +H+K++
Sbjct: 63  AHVKSQ 68


>gb|ESW03867.1| hypothetical protein PHAVU_011G048400g [Phaseolus vulgaris]
          Length = 691

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = +3

Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
           H   +K G +S+IF+ NQLIHLY+  GLL++A KLFDE+   NVF+WN II ++IK
Sbjct: 17  HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEIPHPNVFSWNVIIMAYIK 72


>ref|XP_002306089.2| hypothetical protein POPTR_0004s15930g [Populus trichocarpa]
           gi|550341127|gb|EEE86600.2| hypothetical protein
           POPTR_0004s15930g [Populus trichocarpa]
          Length = 677

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/61 (49%), Positives = 45/61 (73%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           L+ H   +K G    I + NQL+HLY++  L+ +AQKLFDEM +RN ++WNTII++HIK+
Sbjct: 8   LMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIISAHIKS 67

Query: 309 R 311
           +
Sbjct: 68  Q 68


>ref|XP_002306087.2| hypothetical protein POPTR_0004s15870g [Populus trichocarpa]
           gi|550341121|gb|EEE86598.2| hypothetical protein
           POPTR_0004s15870g [Populus trichocarpa]
          Length = 677

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/61 (49%), Positives = 45/61 (73%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           L+ H   +K G    I + NQL+HLY++  L+ +AQKLFDEM +RN ++WNTII++HIK+
Sbjct: 8   LMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIISAHIKS 67

Query: 309 R 311
           +
Sbjct: 68  Q 68


>ref|XP_006487202.1| PREDICTED: uncharacterized protein LOC102624533 [Citrus sinensis]
          Length = 1133

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/60 (51%), Positives = 45/60 (75%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           L+ H   +K G   T  + NQLIH+Y++  LL++++KLFDEM ERNVF+WNTII++ IK+
Sbjct: 452 LICHVQAIKAGMRLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 511


>ref|XP_006423213.1| hypothetical protein CICLE_v10029894mg [Citrus clementina]
           gi|557525147|gb|ESR36453.1| hypothetical protein
           CICLE_v10029894mg [Citrus clementina]
          Length = 676

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/60 (51%), Positives = 45/60 (75%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           L+ H   +K G   T  + NQLIH+Y++  LL++++KLFDEM ERNVF+WNTII++ IK+
Sbjct: 10  LICHVQAIKAGMRLTTITTNQLIHIYSKHNLLRESRKLFDEMPERNVFSWNTIISACIKS 69


>ref|XP_004292002.1| PREDICTED: uncharacterized protein LOC101312896 [Fragaria vesca
            subsp. vesca]
          Length = 2277

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/61 (52%), Positives = 45/61 (73%)
 Frame = +3

Query: 126  NLLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
            +L+SH   +K G    IF+ NQLIHLY++ GL + AQ LFDEM  RNV+++N II++HIK
Sbjct: 1599 SLISHVRSIKSGLSLPIFTSNQLIHLYSRHGLTQHAQHLFDEMPHRNVYSYNAIISTHIK 1658

Query: 306  N 308
            +
Sbjct: 1659 S 1659


>ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g18840 gi|9294693|dbj|BAB03093.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332642633|gb|AEE76154.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 678

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/58 (48%), Positives = 44/58 (75%)
 Frame = +3

Query: 132 LSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
           L H   +K G+  T  S NQL++LY++ GLL++A+ +FDEM ERNV++WN +IA+++K
Sbjct: 9   LHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66


>ref|XP_006406558.1| hypothetical protein EUTSA_v10020206mg [Eutrema salsugineum]
           gi|557107704|gb|ESQ48011.1| hypothetical protein
           EUTSA_v10020206mg [Eutrema salsugineum]
          Length = 678

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 27/58 (46%), Positives = 44/58 (75%)
 Frame = +3

Query: 132 LSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
           L H+  +K G   T  S NQL++LY++ GLL++A+ +FDEM ERNV++WN +I++++K
Sbjct: 9   LHHTRSIKNGLTLTAISSNQLVNLYSRNGLLREARNVFDEMPERNVYSWNAVISAYVK 66


>ref|XP_006297125.1| hypothetical protein CARUB_v10013125mg [Capsella rubella]
           gi|482565834|gb|EOA30023.1| hypothetical protein
           CARUB_v10013125mg [Capsella rubella]
          Length = 678

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 46/60 (76%)
 Frame = +3

Query: 129 LLSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           +L H   +K G+  T  S NQL++LYA+ GLL++A+ +FDEM ERNV++WN +I++++K+
Sbjct: 8   VLHHIRSIKTGSTLTAVSSNQLVNLYAKNGLLREARNVFDEMPERNVYSWNAVISAYLKS 67


>ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
           lyrata] gi|297328994|gb|EFH59413.1| hypothetical protein
           ARALYDRAFT_479395 [Arabidopsis lyrata subsp. lyrata]
          Length = 614

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/58 (48%), Positives = 44/58 (75%)
 Frame = +3

Query: 132 LSHSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
           L H   +K G+  T  S NQL++LY++ GLL++A+ +FDEM ERNV++WN +IA+++K
Sbjct: 9   LHHIRSIKTGSTLTTISSNQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAAYVK 66


>ref|XP_004507434.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Cicer arietinum]
          Length = 688

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = +3

Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
           H   +K G  S IF+ N+LI LY+  GLL+DA KLFDEM   NVF+WN +I ++IK
Sbjct: 15  HVQAIKSGFASCIFTSNKLIRLYSNHGLLQDAHKLFDEMPHPNVFSWNALIMAYIK 70


>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1157

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = +3

Query: 159 GTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIK 305
           G I  +F+ N+LIHLY++ GL ++A+ LFDEM E+NVF+WN II++HI+
Sbjct: 492 GCILPVFTSNKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIR 540


>ref|XP_006854163.1| hypothetical protein AMTR_s00048p00191570 [Amborella trichopoda]
           gi|548857832|gb|ERN15630.1| hypothetical protein
           AMTR_s00048p00191570 [Amborella trichopoda]
          Length = 712

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 27/57 (47%), Positives = 44/57 (77%)
 Frame = +3

Query: 138 HSHIVKGGTISTIFSFNQLIHLYAQQGLLKDAQKLFDEMSERNVFTWNTIIASHIKN 308
           H+HI+K    +TIF++NQLI +Y +   + +A++LF+EM ++NVF+WNT+I  +IKN
Sbjct: 12  HTHIIKTSLPTTIFTYNQLIEVYFKNTYIGEARQLFNEMPQKNVFSWNTMINGYIKN 68