BLASTX nr result
ID: Rheum21_contig00025922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00025922
(1306 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ15872.1| hypothetical protein PRUPE_ppa021626mg [Prunus pe... 335 3e-92
ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi... 333 1e-91
ref|XP_006469053.1| PREDICTED: pentatricopeptide repeat-containi... 332 3e-91
ref|XP_006446741.1| hypothetical protein CICLE_v10017507mg [Citr... 327 7e-90
gb|EXB79007.1| hypothetical protein L484_001451 [Morus notabilis] 316 1e-86
ref|XP_004307287.1| PREDICTED: pentatricopeptide repeat-containi... 313 7e-85
ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi... 306 8e-85
gb|EOY17073.1| Pentatricopeptide repeat-containing protein [Theo... 313 8e-83
ref|XP_002330712.1| predicted protein [Populus trichocarpa] 292 2e-81
ref|XP_004487183.1| PREDICTED: pentatricopeptide repeat-containi... 297 2e-81
ref|XP_006376410.1| pentatricopeptide repeat-containing family p... 289 2e-80
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar... 292 1e-79
ref|XP_002525148.1| pentatricopeptide repeat-containing protein,... 293 3e-79
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi... 295 1e-78
ref|XP_006417939.1| hypothetical protein EUTSA_v10008110mg [Eutr... 286 3e-78
ref|XP_006305261.1| hypothetical protein CARUB_v10009635mg [Caps... 286 5e-78
ref|XP_006354624.1| PREDICTED: pentatricopeptide repeat-containi... 286 9e-78
ref|XP_002892331.1| pentatricopeptide repeat-containing protein ... 283 3e-77
ref|XP_006354630.1| PREDICTED: pentatricopeptide repeat-containi... 281 2e-76
ref|XP_004229701.1| PREDICTED: pentatricopeptide repeat-containi... 280 4e-76
>gb|EMJ15872.1| hypothetical protein PRUPE_ppa021626mg [Prunus persica]
Length = 343
Score = 335 bits (860), Expect(2) = 3e-92
Identities = 170/297 (57%), Positives = 223/297 (75%)
Frame = +3
Query: 315 MALLAPKFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGS 494
MA+ A KF R + L S +SI+S Q ++++IK AV K+YQ IP+LL +
Sbjct: 1 MAIRAAKFCRSFLPLHCRLLQYCSIYSISSSQMLQETIKNAVEAKTYQKIPDLLKSSAQA 60
Query: 495 YDNPNPFSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAF 674
NPNPFS+LS+FP N R QV+DEILQSF LRPRS+ ++AY LLSFTLQ SN FP+A
Sbjct: 61 CQNPNPFSFLSSFPHNLRTQVVDEILQSFIPLRPRSRGQIAYSYLLSFTLQCSNPFPLAL 120
Query: 675 AVLQRALRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLIS 854
A+LQR LRSGC PVPQ LLLSSAWL CR E+ + ILLE++S GYH DCGTCNYLIS
Sbjct: 121 AILQRTLRSGCIPVPQTLLLLSSAWLNCR-NESHSVSKILLEMQSIGYHPDCGTCNYLIS 179
Query: 855 SLCAVDKLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLS 1034
SLC+VD+L EA++VL M+ A CVPD+ESF++++ AM +R+TA+A ++K+M+ K L+
Sbjct: 180 SLCSVDQLNEAVKVLKEMSRAGCVPDLESFDTVIGAMCTVRRTAEAIDMIKQMVEKVGLT 239
Query: 1035 PKQGALVKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
P+QG + K+ A+LRAN+ IW AV+MIEFLE+ G+ VGFES+ELVV GCL+C E++LA
Sbjct: 240 PRQGTIAKVAAALRANRNIWRAVEMIEFLERDGYPVGFESYELVVNGCLDCGEYILA 296
Score = 31.6 bits (70), Expect(2) = 3e-92
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V L GEW+LAC+VR RF L S
Sbjct: 316 QKVVERLAGAGEWKLACSVRQRFGELRS 343
>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
[Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
protein product [Vitis vinifera]
Length = 343
Score = 333 bits (854), Expect(2) = 1e-91
Identities = 171/297 (57%), Positives = 218/297 (73%)
Frame = +3
Query: 315 MALLAPKFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGS 494
MA+ A K R L + ++S ISS HSI S Q +E+SIK AV +K+YQ IP+LL + +
Sbjct: 1 MAIGATKLCRSLFHFHYSLRQISSIHSITSSQTLEESIKAAVESKTYQKIPDLLISLEET 60
Query: 495 YDNPNPFSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAF 674
NPNPFS+LSTF N R QV+DEILQSF LRPRS+ ++AY CLLSFTLQS+N P+A
Sbjct: 61 CLNPNPFSFLSTFSQNLRTQVVDEILQSFIPLRPRSRPQIAYACLLSFTLQSANPLPLAL 120
Query: 675 AVLQRALRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLIS 854
A+LQR LRSGC PVPQ HLLLSSAWL R Q + ++IL E++S GY+ DCGTCNYLI
Sbjct: 121 AILQRTLRSGCIPVPQTHLLLSSAWLSRRRQSH-SVSNILSEMQSIGYYPDCGTCNYLIL 179
Query: 855 SLCAVDKLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLS 1034
SLCA+D+L EA+ VL M C+PD+E + S++ AM +R+T AT+L+KEM+ K L+
Sbjct: 180 SLCAIDQLVEAVIVLKSMGQVGCIPDLEGYGSVIGAMCAMRRTTDATELMKEMVAKIGLT 239
Query: 1035 PKQGALVKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
P+QG ++ L A+LRA KEIW AV+MIEFLE F+ GF S+E V+EGCL C EFVLA
Sbjct: 240 PRQGTVLNLVAALRAKKEIWKAVEMIEFLEGEDFNAGFASYESVLEGCLACHEFVLA 296
Score = 32.3 bits (72), Expect(2) = 1e-91
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL +GEW+LA AVR RF+ L S
Sbjct: 316 QKVVEGLANLGEWKLALAVRQRFADLRS 343
>ref|XP_006469053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
[Citrus sinensis]
Length = 343
Score = 332 bits (850), Expect(2) = 3e-91
Identities = 167/297 (56%), Positives = 222/297 (74%)
Frame = +3
Query: 315 MALLAPKFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGS 494
M + A K R L N L SS S++S + +E++++ AV K YQ IP LL F+ +
Sbjct: 1 MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60
Query: 495 YDNPNPFSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAF 674
NPNPFS+LS FP N+R +VIDE+L+SF LRPRS+ K+AYD LLS+TLQS + P+A
Sbjct: 61 CQNPNPFSFLSNFPQNHRIKVIDEMLESFIPLRPRSRPKIAYDYLLSYTLQSLHPLPLAL 120
Query: 675 AVLQRALRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLIS 854
A+LQR LRSGC PVPQI LLLSSAWLE R Q A ILLE+KS GYH DCGTCNYL+S
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERRCQSQ-SVADILLEMKSIGYHPDCGTCNYLVS 179
Query: 855 SLCAVDKLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLS 1034
SLCA+D+L EA +VL GM++A CVPD+ES++ ++ AMS R+T A +++KEM++ L
Sbjct: 180 SLCAIDQLVEAAKVLKGMSSAECVPDLESYSIVIGAMSTARKTNDAVEMMKEMVLNMGLM 239
Query: 1035 PKQGALVKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
P+QG ++K+ A+LRAN+E+W AV+MIEFLE+ G +GF+ +E+VVEGCLECRE++LA
Sbjct: 240 PRQGMVIKVAAALRANREMWKAVEMIEFLERKGCPIGFQGYEVVVEGCLECREYILA 296
Score = 32.3 bits (72), Expect(2) = 3e-91
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL VGEW+LA VR RF+ L S
Sbjct: 316 QKVVEGLAGVGEWKLATVVRQRFAELKS 343
>ref|XP_006446741.1| hypothetical protein CICLE_v10017507mg [Citrus clementina]
gi|557549352|gb|ESR59981.1| hypothetical protein
CICLE_v10017507mg [Citrus clementina]
Length = 343
Score = 327 bits (838), Expect(2) = 7e-90
Identities = 164/297 (55%), Positives = 220/297 (74%)
Frame = +3
Query: 315 MALLAPKFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGS 494
M + A K R L N L SS S++S + +E++++ AV K YQ IP LL F+ +
Sbjct: 1 MMIGAIKSCRSLVNFRPCLLQFSSLRSMSSLRTLEETVRAAVDAKDYQQIPELLGSFEEA 60
Query: 495 YDNPNPFSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAF 674
NPNPFS+LS FP N+R +VIDE+L+SF LRPRS+ K+AYD LLS+TLQS + P+A
Sbjct: 61 CQNPNPFSFLSNFPQNHRIKVIDEMLESFIPLRPRSRPKIAYDYLLSYTLQSLHPLPLAL 120
Query: 675 AVLQRALRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLIS 854
A+LQR LRSGC PVPQI LLLSSAWLE R Q A ILLE+KS GYH DCGTCNYL+S
Sbjct: 121 AILQRTLRSGCVPVPQIRLLLSSAWLERRCQSQ-SVADILLEMKSIGYHPDCGTCNYLVS 179
Query: 855 SLCAVDKLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLS 1034
SLCA+D+L EA +VL GM+ C+PD+ES++ ++ AMS R+T A +++KEM++ L
Sbjct: 180 SLCAIDQLVEAAKVLKGMSNVECIPDLESYSIVIGAMSTARKTNDAVEMMKEMVLNMGLM 239
Query: 1035 PKQGALVKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
P+QG ++K+ A+LRAN+E+W AV+MI+FLE+ G +GF+ +E+VVEGCLECRE++LA
Sbjct: 240 PRQGMVIKVAAALRANREMWKAVEMIKFLERKGCPIGFQGYEVVVEGCLECREYILA 296
Score = 32.3 bits (72), Expect(2) = 7e-90
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL VGEW+LA VR RF+ L S
Sbjct: 316 QKVVEGLAGVGEWKLASVVRQRFAELKS 343
>gb|EXB79007.1| hypothetical protein L484_001451 [Morus notabilis]
Length = 344
Score = 316 bits (809), Expect(2) = 1e-86
Identities = 158/274 (57%), Positives = 206/274 (75%)
Frame = +3
Query: 384 SCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVID 563
S +S +S ++++IK AV KSYQ IP+LLT F+ + NPNPFS+LSTFP R Q+ID
Sbjct: 24 SMNSGSSLPMLQENIKDAVEAKSYQKIPDLLTSFEQARQNPNPFSFLSTFPQVLRTQIID 83
Query: 564 EILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSS 743
EILQSF LRPRS+ ++AY CLLS+TLQ + P++ A+LQ+ LRSGC PVPQ HLLLSS
Sbjct: 84 EILQSFLPLRPRSRPQIAYSCLLSYTLQRPDPLPLSLAILQQTLRSGCVPVPQTHLLLSS 143
Query: 744 AWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASC 923
AWL+ R + ++LLE+KS GYH DCGTCNYLISSLCAVD+L EA++VL GM A C
Sbjct: 144 AWLDHRRSQCRSVQNVLLEMKSIGYHPDCGTCNYLISSLCAVDQLSEAIKVLKGMAGAEC 203
Query: 924 VPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAV 1103
+PD E+++ ++ M R+TA+A +L++M K L+P+QG +VKL A+L AN+EIW AV
Sbjct: 204 IPDSETYDIVIKTMCKFRRTAEALDMLQQMTKKVGLTPRQGTIVKLAAALLANREIWRAV 263
Query: 1104 DMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
+MIE L K G VGFES+ELVVEG LEC E++LA
Sbjct: 264 EMIELLVKEGHVVGFESYELVVEGSLECGEYILA 297
Score = 32.7 bits (73), Expect(2) = 1e-86
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 1214 VGEWRLACAVRHRFSALNS 1270
+GEW+LACAVR RF L S
Sbjct: 326 IGEWKLACAVRQRFVELRS 344
>ref|XP_004307287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
[Fragaria vesca subsp. vesca]
Length = 341
Score = 313 bits (803), Expect(2) = 7e-85
Identities = 159/297 (53%), Positives = 223/297 (75%)
Frame = +3
Query: 315 MALLAPKFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGS 494
MA+++ K R L + S +SIA A+++++K AV K+YQ IP+LL F+ +
Sbjct: 1 MAIVSAKLCRYLLPLNCCLVKYHSINSIAPSHALQETVKNAVEAKAYQDIPDLLISFEQA 60
Query: 495 YDNPNPFSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAF 674
NPNPFS+LSTFP +R QV+DE+LQSF +RPRS+ + AY LLSFTLQSSN P+
Sbjct: 61 CQNPNPFSFLSTFP--HRMQVVDEMLQSFIPIRPRSRAQAAYAYLLSFTLQSSNPLPLGL 118
Query: 675 AVLQRALRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLIS 854
A+LQR LRSGC PV Q LLLSSAWL+CR +E+ + IL E++S GY+ DC TCNYLIS
Sbjct: 119 AILQRTLRSGCVPVAQTRLLLSSAWLDCR-KESRSVSDILFEMQSIGYNPDCSTCNYLIS 177
Query: 855 SLCAVDKLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLS 1034
SLCAVD+L+EA++VL GM+ A CVPD+ESF++++ AM +R+T++A ++++M+ K L+
Sbjct: 178 SLCAVDQLDEAVKVLKGMSKAGCVPDLESFDTVVGAMCTVRKTSEALDMIQKMVEKVGLT 237
Query: 1035 PKQGALVKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
P+QG +VK+ ++LRANKEIW AV++IEFLE+ + VGFES++LVV+GCL+ E +LA
Sbjct: 238 PRQGTIVKVASALRANKEIWRAVELIEFLERKDYPVGFESYDLVVKGCLDSGENILA 294
Score = 29.3 bits (64), Expect(2) = 7e-85
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 1217 GEWRLACAVRHRFSALNS 1270
GEW+LA AVR RFS L S
Sbjct: 324 GEWKLANAVRQRFSELRS 341
>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
isoform X1 [Glycine max]
Length = 342
Score = 306 bits (785), Expect(2) = 8e-85
Identities = 155/271 (57%), Positives = 205/271 (75%)
Frame = +3
Query: 393 SIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVIDEIL 572
S++S Q +E +++ V K+Y IP LL + NPFS+ S+FP N R Q++DE+L
Sbjct: 27 SVSSLQNLEQAVRAEVEAKNYIKIPELLIS-SDACQISNPFSFFSSFPQNIRVQIVDEML 85
Query: 573 QSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSSAWL 752
QS +RPRS+ ++ Y LLS+TLQSS+ FP+A AVLQR LRSGC PVPQ H+LLSSAWL
Sbjct: 86 QSLIPIRPRSKAQLTYSYLLSYTLQSSHPFPLALAVLQRTLRSGCVPVPQTHVLLSSAWL 145
Query: 753 ECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASCVPD 932
+ + A+ILL+++S GYH DCGTCNYL+SSLCAVD+LEEA++VL GM A C+PD
Sbjct: 146 DQHCLSH-SVANILLQMQSIGYHPDCGTCNYLLSSLCAVDQLEEAVKVLRGMGGAGCIPD 204
Query: 933 VESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAVDMI 1112
S+ +++ AM +R+TAKA L+K+M+V++ L+P QG LVKL A+LRAN+EIW AV+MI
Sbjct: 205 SSSYGAVIGAMCRVRKTAKALDLMKQMVVQYGLTPGQGTLVKLLAALRANREIWKAVEMI 264
Query: 1113 EFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
EFLEK G VGFES+ELV+EGCLE RE+VLA
Sbjct: 265 EFLEKEGNSVGFESYELVIEGCLEKREYVLA 295
Score = 35.8 bits (81), Expect(2) = 8e-85
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q + GL + EW LACAVR RF+AL S
Sbjct: 315 QKIIEGLASIDEWNLACAVRQRFAALKS 342
>gb|EOY17073.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 343
Score = 313 bits (803), Expect = 8e-83
Identities = 160/297 (53%), Positives = 213/297 (71%)
Frame = +3
Query: 315 MALLAPKFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGS 494
MA KF R L N Y S HSI+ +VE++++ AV KSY+ +P++L + +
Sbjct: 1 MATRPTKFCRTLFNLYPCLFHSSLIHSISPLHSVEETVEAAVEAKSYKQLPDILIAVENT 60
Query: 495 YDNPNPFSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAF 674
PNPFS+LSTFPL R Q+IDEILQSF +RPRS+ +AYD LLS+TLQS + P++
Sbjct: 61 VRIPNPFSFLSTFPLKLRTQIIDEILQSFKSIRPRSRPHIAYDLLLSYTLQSPHPIPLSL 120
Query: 675 AVLQRALRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLIS 854
A+LQ LRSGC P PQI LLLSSAWL C+ Q + S L+E++ GY D CNYLIS
Sbjct: 121 AILQCTLRSGCLPAPQIKLLLSSAWLNCQGQSQSVSDS-LMEMQDIGYCPDSLMCNYLIS 179
Query: 855 SLCAVDKLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLS 1034
SLCAVD+LEEA++VL GM+ +PD+ES+ ++AAM R+T A +L+K+M+ K RL+
Sbjct: 180 SLCAVDRLEEAVKVLKGMSGVGSLPDLESYAGLIAAMCTFRKTVDAVELMKQMVQKARLT 239
Query: 1035 PKQGALVKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
P+QG +VK+ A+LRAN+EIW A++MIEFLE+ G VGFES+ELVVEGCLEC E++LA
Sbjct: 240 PRQGTVVKVLATLRANREIWKAIEMIEFLEREGNPVGFESYELVVEGCLECCEYILA 296
>ref|XP_002330712.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 292 bits (748), Expect(2) = 2e-81
Identities = 145/268 (54%), Positives = 195/268 (72%)
Frame = +3
Query: 402 SHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVIDEILQSF 581
SH +E+++K AV KSY P+L FK S +NP+PFS+LSTFP N R QVIDEI+QS
Sbjct: 28 SHTPLEETLKAAVECKSYSKFPDLFDSFKQSNNNPSPFSFLSTFPFNLRTQVIDEIIQSL 87
Query: 582 THLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSSAWLECR 761
+RPR + + Y LLS+TLQ+SN F ++ A++Q LRSGC PVPQ H+ LSSAWL+ R
Sbjct: 88 IPIRPRFRNFIVYSSLLSYTLQNSNLFSLSLAIIQCTLRSGCLPVPQTHVSLSSAWLDRR 147
Query: 762 FQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASCVPDVES 941
+E IL+E+KS GY+ DCG CNY++ SLC VD+L EA++VL GM C PD ES
Sbjct: 148 -REGQSVGDILMEMKSIGYNPDCGLCNYIVLSLCNVDQLIEAVKVLKGMKQVGCFPDWES 206
Query: 942 FNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAVDMIEFL 1121
+ ++ AM +R+ A +++KEM+V+ RL P+QG +VK+ A+LRAN+E+ A +MIEFL
Sbjct: 207 YGIVIGAMCRVRKCDDAIEMMKEMVVRMRLCPRQGVVVKVLAALRANREMRKAGEMIEFL 266
Query: 1122 EKVGFDVGFESFELVVEGCLECREFVLA 1205
EK G+ VGFES+ELVVEGCLEC++F LA
Sbjct: 267 EKEGYGVGFESYELVVEGCLECKDFFLA 294
Score = 38.9 bits (89), Expect(2) = 2e-81
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GLI GEW+LAC VR RF+AL+S
Sbjct: 314 QKVVEGLIDAGEWKLACTVRERFAALSS 341
>ref|XP_004487183.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
isoform X1 [Cicer arietinum]
gi|502082497|ref|XP_004487184.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g06270-like isoform X2 [Cicer arietinum]
Length = 338
Score = 297 bits (760), Expect(2) = 2e-81
Identities = 152/283 (53%), Positives = 204/283 (72%), Gaps = 4/283 (1%)
Frame = +3
Query: 369 FLCISSCHSI----ASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFP 536
F ++ C S+ +S Q +E +I+ V K+Y IP+L + N NPFS+LS+FP
Sbjct: 10 FSILNQCPSVRLVSSSPQKLEQAIRAEVEAKNYVKIPDLFSVELSKSQNSNPFSFLSSFP 69
Query: 537 LNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPV 716
N + Q++DE+LQSF +RPR + ++AY LLS+TLQSS+ P+A AVLQR LRSGC P+
Sbjct: 70 QNLQVQIVDEMLQSFIPIRPRYKPQLAYSYLLSYTLQSSHPLPLALAVLQRTLRSGCLPI 129
Query: 717 PQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEV 896
PQ LLLSSAWL+ R + A+ILLE++S GYH DCGTCNYL+SSLCAVD+L EA+ V
Sbjct: 130 PQTQLLLSSAWLDRRCLSH-SVANILLEMQSIGYHPDCGTCNYLLSSLCAVDQLVEAVNV 188
Query: 897 LNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLR 1076
L G+ A C+PD S+ ++ AM +R+TA A L+K+M+VK+ L+P G +VK+ A+LR
Sbjct: 189 LKGIGGAGCIPDSTSYGILIGAMCKVRRTADAQDLMKQMVVKYGLTPDHGTVVKVLAALR 248
Query: 1077 ANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
ANKEIW AV++IEFLE G VGFES+EL +EGCLE RE+VLA
Sbjct: 249 ANKEIWKAVEIIEFLEIEGNSVGFESYELAIEGCLETREYVLA 291
Score = 34.3 bits (77), Expect(2) = 2e-81
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q + GL + EW++ACAVR RF+ L S
Sbjct: 311 QKIIDGLASIDEWKIACAVRQRFATLKS 338
>ref|XP_006376410.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550325686|gb|ERP54207.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 341
Score = 289 bits (739), Expect(2) = 2e-80
Identities = 144/268 (53%), Positives = 194/268 (72%)
Frame = +3
Query: 402 SHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVIDEILQSF 581
SH +E+++K AV KSY P+L FK S + P+PFS+LSTFP N R QVIDEI+QS
Sbjct: 28 SHTPLEETLKAAVECKSYSKFPDLFDSFKQSNNIPSPFSFLSTFPFNLRTQVIDEIIQSL 87
Query: 582 THLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSSAWLECR 761
+RPR + + Y LLS+TLQ+SN F ++ A++Q LRSGC PVPQ H+ LSSAWL+ R
Sbjct: 88 IPIRPRFRNFIVYSSLLSYTLQNSNLFSLSLAIIQCTLRSGCLPVPQTHVSLSSAWLDRR 147
Query: 762 FQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASCVPDVES 941
+E IL+E+KS GY+ DCG CNY++ SLC VD+L EA++VL GM C PD ES
Sbjct: 148 -REGQSVGDILMEMKSIGYNPDCGLCNYIVLSLCNVDQLIEAVKVLKGMKQVGCFPDWES 206
Query: 942 FNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAVDMIEFL 1121
+ ++ AM +R+ A +++KEM+V+ RL P+QG +VK+ A+LRAN+E+ A +MIEFL
Sbjct: 207 YGIVIGAMCRVRKCDDAIEMMKEMVVRMRLCPRQGVVVKVLAALRANREMRKAGEMIEFL 266
Query: 1122 EKVGFDVGFESFELVVEGCLECREFVLA 1205
EK G+ VGFES+ELVVEGCLEC++F LA
Sbjct: 267 EKEGYGVGFESYELVVEGCLECKDFFLA 294
Score = 38.9 bits (89), Expect(2) = 2e-80
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GLI GEW+LAC VR RF+AL+S
Sbjct: 314 QKVVEGLIDAGEWKLACTVRERFAALSS 341
>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
similarity to an unknown protein F23N19.4 gi|6630464 from
Arabidopsis thaliana gb|AC007190 and contains multiple
PPR PF|01535 repeats. EST gb|T44174 comes from this gene
[Arabidopsis thaliana] gi|17529194|gb|AAL38823.1| unknown
protein [Arabidopsis thaliana] gi|20465473|gb|AAM20196.1|
unknown protein [Arabidopsis thaliana]
gi|21536601|gb|AAM60933.1| unknown [Arabidopsis thaliana]
gi|332189849|gb|AEE27970.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 343
Score = 292 bits (747), Expect(2) = 1e-79
Identities = 147/278 (52%), Positives = 200/278 (71%)
Frame = +3
Query: 372 LCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRN 551
+CI SI+S +AVE +IK AV K Y IP L+ K Y N FS+LS F ++R
Sbjct: 20 VCIPFFRSISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRI 79
Query: 552 QVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHL 731
+VIDEILQSF +RPRS K+ Y LL++ LQSS+ P++FA+LQR LRSGC P PQ HL
Sbjct: 80 RVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHL 139
Query: 732 LLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMT 911
LLS AWLE R + + A I+ E+K GY D GTCNYL+SSLCAVDKL+EA++V+ M+
Sbjct: 140 LLSDAWLERR-RGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMS 198
Query: 912 AASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEI 1091
AA C+PDVES+ +++ ++ + R+T K++KEM+ K +SP++G L K+ A+LRAN+EI
Sbjct: 199 AAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREI 258
Query: 1092 WNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
W A++MIEF+E + V FES+E+VVEGCLE RE++LA
Sbjct: 259 WKAIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILA 296
Score = 33.1 bits (74), Expect(2) = 1e-79
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V LI +GEW+LAC VR R S L S
Sbjct: 316 QKVVERLINIGEWKLACTVRQRVSELRS 343
>ref|XP_002525148.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535607|gb|EEF37275.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 354
Score = 293 bits (751), Expect(2) = 3e-79
Identities = 155/287 (54%), Positives = 208/287 (72%), Gaps = 1/287 (0%)
Frame = +3
Query: 348 LHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFK-GSYDNPNPFSYL 524
LH +F S C SI+S +E SIK A+ +SYQ IP+LL K S NPNPFS+L
Sbjct: 28 LHQIAFNF---SLCRSISS---LERSIKAAIETESYQEIPDLLISSKIQSLHNPNPFSFL 81
Query: 525 STFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSG 704
STFPLN R +ID+ILQSF +RP S++K+ Y CLLS TLQS N P+A A+LQR RSG
Sbjct: 82 STFPLNQRTHIIDKILQSFITIRPHSRLKLVYSCLLSHTLQSPNPLPLALAILQRGFRSG 141
Query: 705 CAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEE 884
P PQI L L+SAWL R Q + A ILLE++S GY+ DCG CNY+I SLC+VD+L E
Sbjct: 142 FMPEPQIRLFLTSAWLNTRVQLHT-VAGILLEMESIGYYPDCGICNYIIYSLCSVDQLPE 200
Query: 885 ALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLF 1064
A++VL GM+ A CVPD+E +++++ +MS R+T A +++KEM+VK L+P+QG ++KL
Sbjct: 201 AVKVLKGMSGAGCVPDLECYDTVIGSMSKARKTVDAVEIMKEMVVKVGLNPRQGTMMKLA 260
Query: 1065 ASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
A+LRAN+EI AV++IEFLE+ G VGF ++LV+EGCLE +E++LA
Sbjct: 261 AALRANREILIAVELIEFLEREGCVVGFGCYQLVLEGCLERKEYILA 307
Score = 30.4 bits (67), Expect(2) = 3e-79
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GLI W +AC VR RF+ L+S
Sbjct: 327 QKVVEGLIDADAWNIACTVRQRFAELSS 354
>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
[Cucumis sativus] gi|449483078|ref|XP_004156487.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Cucumis sativus]
Length = 343
Score = 295 bits (756), Expect(2) = 1e-78
Identities = 150/291 (51%), Positives = 205/291 (70%)
Frame = +3
Query: 333 KFSRILHNCYHSFLCISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNP 512
K S L N +H SS HSI+ Q ++DSIK AV +KSY+ +P+L + + NPN
Sbjct: 7 KTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNL 66
Query: 513 FSYLSTFPLNYRNQVIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRA 692
F +LSTFPLN R QV+DEILQS +RPRS+ + + LL +TLQS + FP++ VLQR
Sbjct: 67 FLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRI 126
Query: 693 LRSGCAPVPQIHLLLSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVD 872
L SGC P PQ H LLSSAWL+ R Q A+IL++++S GY D CNYLISSLC++
Sbjct: 127 LHSGCVPSPQTHFLLSSAWLKQRSQAK-SVANILMDMQSIGYKPDSNICNYLISSLCSIG 185
Query: 873 KLEEALEVLNGMTAASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGAL 1052
+L EA +VL GM A C+PD+ES+ +++ A + +R+T KA +LLKEM+VK +L P+QG +
Sbjct: 186 ELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTI 245
Query: 1053 VKLFASLRANKEIWNAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
+ A+LR N+E+ AV++IE LE+ DVGFES+EL+VEGCLECRE++LA
Sbjct: 246 TNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILA 296
Score = 26.2 bits (56), Expect(2) = 1e-78
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL +GE LA AVR RF L S
Sbjct: 316 QEVVEGLAGIGEVELASAVRRRFVELGS 343
>ref|XP_006417939.1| hypothetical protein EUTSA_v10008110mg [Eutrema salsugineum]
gi|557095710|gb|ESQ36292.1| hypothetical protein
EUTSA_v10008110mg [Eutrema salsugineum]
Length = 343
Score = 286 bits (733), Expect(2) = 3e-78
Identities = 145/277 (52%), Positives = 197/277 (71%)
Frame = +3
Query: 375 CISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQ 554
C+ SI+S +AVE +IK AV K Y IP+L+ K Y N FS+LS F ++R +
Sbjct: 21 CVPFFRSISSFEAVEKAIKCAVETKEYLQIPHLVVSLKQPYQNSKLFSFLSAFQHHHRIR 80
Query: 555 VIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLL 734
VIDEILQSF +RPRS K+ Y LL++ LQSS+ P++FA+LQR LRSGC P PQ HLL
Sbjct: 81 VIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLL 140
Query: 735 LSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTA 914
LS+AWLE R + A IL E+K GY D GTCNYL+SSLCAVDKL+EA+ V+ M
Sbjct: 141 LSNAWLERR-RGTQSVADILSEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAVRVVEEMGE 199
Query: 915 ASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIW 1094
A C+PD+ES+ +++ +M + R+T+ K +KEM+ K +SP++G L K+ A+LRAN+EIW
Sbjct: 200 AGCIPDLESYGAVINSMCLARKTSDVVKTVKEMVSKAGISPRKGMLTKVAAALRANREIW 259
Query: 1095 NAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
A++MIEF+E + V FES+E++VEGCLE RE++LA
Sbjct: 260 KAIEMIEFVESRDYPVEFESYEVLVEGCLEVREYILA 296
Score = 33.9 bits (76), Expect(2) = 3e-78
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V LI +GEW+LAC VR R S L S
Sbjct: 316 QKVVERLISIGEWKLACTVRQRLSELRS 343
>ref|XP_006305261.1| hypothetical protein CARUB_v10009635mg [Capsella rubella]
gi|482573972|gb|EOA38159.1| hypothetical protein
CARUB_v10009635mg [Capsella rubella]
Length = 343
Score = 286 bits (731), Expect(2) = 5e-78
Identities = 144/277 (51%), Positives = 198/277 (71%)
Frame = +3
Query: 375 CISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQ 554
CI I+S +AVE +IK AV K Y IP+L+ K Y N FS+LS F ++R +
Sbjct: 21 CIPFFRPISSFEAVEKAIKCAVETKEYLRIPDLVVSLKEPYQNSMLFSFLSAFHHHHRIR 80
Query: 555 VIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLL 734
VIDEILQSF +RPRS K+ Y LL++ LQSS+ P++FA+LQR LRSGC P PQ HLL
Sbjct: 81 VIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLL 140
Query: 735 LSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTA 914
LS AWL+ R + + A I+ E+K GY D GTCNYL+SSLCAVDKL+EA++V+ M A
Sbjct: 141 LSDAWLQRR-RGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGA 199
Query: 915 ASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIW 1094
A C+PDVES+ +++ ++ + R+T ++KEM+ K R+SP++G L K+ ++LRAN+E W
Sbjct: 200 AGCIPDVESYGAVINSLCLARKTNDVVNIVKEMVSKARISPRKGMLTKVASALRANRETW 259
Query: 1095 NAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
A++MIEF+E G+ V FES+E+VVEGCLE RE++LA
Sbjct: 260 KAIEMIEFVESRGYPVEFESYEVVVEGCLEIREYILA 296
Score = 33.9 bits (76), Expect(2) = 5e-78
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V LI +GEW+LAC VR R S L S
Sbjct: 316 QKVVERLISIGEWKLACTVRQRLSELKS 343
>ref|XP_006354624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
[Solanum tuberosum]
Length = 333
Score = 286 bits (731), Expect(2) = 9e-78
Identities = 143/274 (52%), Positives = 200/274 (72%), Gaps = 1/274 (0%)
Frame = +3
Query: 387 CHS-IASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVID 563
C S I+S + +E+SIK V +K Y+ IP++L+ +G + +PNPFS+LSTFP N +++D
Sbjct: 14 CRSFISSARMLEESIKAVVEDKRYEQIPDILSSSEGFHRSPNPFSFLSTFPENTSVKIVD 73
Query: 564 EILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSS 743
EILQSFT +RPR + ++AY CLLS++LQSSN P+A A+LQR LRSGC PVPQ HLLLS+
Sbjct: 74 EILQSFTTIRPRYRPQIAYSCLLSYSLQSSNPLPLALAILQRTLRSGCIPVPQTHLLLST 133
Query: 744 AWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASC 923
AW+E R ++ +SILLE++ GY DCGTC+YLISSLC VD+++EA+ VL GM A C
Sbjct: 134 AWIE-RRSKSYSVSSILLEMQDIGYAPDCGTCSYLISSLCKVDQIDEAVNVLKGMGRAGC 192
Query: 924 VPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAV 1103
PD++ + S++ +S LR T+ K L EM+ LSP++ LVK A++ ANKEI A+
Sbjct: 193 SPDLDCYGSLIDNLSELRMTSAIIKTLNEMVAIFGLSPRKETLVKALAAILANKEIRRAI 252
Query: 1104 DMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
++IEFL G +GFE ++ V+EGCLE R+F+LA
Sbjct: 253 EVIEFLTNEGVHIGFECYQSVLEGCLESRQFILA 286
Score = 33.1 bits (74), Expect(2) = 9e-78
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL +GEW+LA AVR RF+ L S
Sbjct: 306 QKVVEGLTSIGEWKLANAVRQRFAELRS 333
>ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338173|gb|EFH68590.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 343
Score = 283 bits (725), Expect(2) = 3e-77
Identities = 145/277 (52%), Positives = 195/277 (70%)
Frame = +3
Query: 375 CISSCHSIASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQ 554
C SI+S +AVE +IK AV K Y IP L+ K Y N FS+LS F +R +
Sbjct: 21 CFPFFRSISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSMLFSFLSAFQHQHRIR 80
Query: 555 VIDEILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLL 734
VIDEILQSF +RPRS K+ Y LL++ LQSS+ P++FA+LQR LRSGC P PQ LL
Sbjct: 81 VIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTQLL 140
Query: 735 LSSAWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTA 914
LS AWLE R + + A I+ E+K GY D GTCNYL+SSLCAVDKL+EA++V+ M A
Sbjct: 141 LSDAWLERR-RGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMGA 199
Query: 915 ASCVPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIW 1094
A C+PDVES+ +++ ++ + R+T K++KEM+ K +SP++G L K+ A+LRAN+EIW
Sbjct: 200 AGCIPDVESYGAVINSLCLARKTNDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIW 259
Query: 1095 NAVDMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
A++MIEF+E + V FES+E+VVEGCLE RE++LA
Sbjct: 260 KAIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILA 296
Score = 33.9 bits (76), Expect(2) = 3e-77
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V LI +GEW+LAC VR R S L S
Sbjct: 316 QKVVERLISIGEWKLACTVRQRLSELRS 343
>ref|XP_006354630.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
[Solanum tuberosum]
Length = 333
Score = 281 bits (720), Expect(2) = 2e-76
Identities = 141/274 (51%), Positives = 199/274 (72%), Gaps = 1/274 (0%)
Frame = +3
Query: 387 CHS-IASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVID 563
C S I+S + +E+SIK V +K Y+ IP++L+ +G + +PNPFS+LS+FP N +++D
Sbjct: 14 CRSFISSARMLEESIKAVVEDKRYEQIPDILSSSEGFHRSPNPFSFLSSFPENTSVKIVD 73
Query: 564 EILQSFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSS 743
EILQSFT +RPR + ++AY CLLS++L SSN P+A A+LQR LRSGC PVPQ HLLLS+
Sbjct: 74 EILQSFTPIRPRYRPQIAYSCLLSYSLLSSNPLPLALAILQRTLRSGCIPVPQTHLLLST 133
Query: 744 AWLECRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASC 923
AW+E R ++ +SILLE++ GY DCGTC+YLISSLC VD+++EA+ VL GM A C
Sbjct: 134 AWIERR-SKSYSVSSILLEMQDIGYAPDCGTCSYLISSLCKVDQIDEAVNVLKGMGRAGC 192
Query: 924 VPDVESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAV 1103
PD++ + S++ +S LR T+ K L EM+ LSP++ LVK A++ ANKEI A+
Sbjct: 193 SPDLDCYGSLIDNLSELRMTSAIIKTLNEMVAIFGLSPRKETLVKALAAILANKEIRRAI 252
Query: 1104 DMIEFLEKVGFDVGFESFELVVEGCLECREFVLA 1205
++IEFL G +GFE ++ V+EGCLE R+F+LA
Sbjct: 253 EVIEFLTNEGVHIGFECYQSVLEGCLESRQFILA 286
Score = 33.1 bits (74), Expect(2) = 2e-76
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL +GEW+LA AVR RF+ L S
Sbjct: 306 QKVVEGLTSIGEWKLANAVRQRFAELRS 333
>ref|XP_004229701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270-like
[Solanum lycopersicum]
Length = 333
Score = 280 bits (717), Expect(2) = 4e-76
Identities = 141/270 (52%), Positives = 195/270 (72%)
Frame = +3
Query: 396 IASHQAVEDSIKTAVANKSYQLIPNLLTYFKGSYDNPNPFSYLSTFPLNYRNQVIDEILQ 575
I+S + +E+SIK V +K Y+ IP++L+ +G + NPFS+LS FP N +++DEILQ
Sbjct: 18 ISSARMLEESIKAMVEDKRYEQIPDILSSSEGFHRTSNPFSFLSNFPENTSVRIVDEILQ 77
Query: 576 SFTHLRPRSQVKVAYDCLLSFTLQSSNSFPIAFAVLQRALRSGCAPVPQIHLLLSSAWLE 755
SFT +RPR + ++AY CLLS++LQ+SN P+A A+LQR LRSGC PVPQ HLLLS+AW+E
Sbjct: 78 SFTPIRPRYRPQIAYSCLLSYSLQTSNPLPLALAILQRTLRSGCIPVPQTHLLLSAAWME 137
Query: 756 CRFQENLPAASILLELKSNGYHLDCGTCNYLISSLCAVDKLEEALEVLNGMTAASCVPDV 935
R + + +SILLE++ GY DCGTCNYLISSLC VD+++EA+ VL GM A C PD+
Sbjct: 138 RRSKSH-SVSSILLEMQDIGYAPDCGTCNYLISSLCKVDQIDEAVNVLKGMGRAGCCPDL 196
Query: 936 ESFNSIMAAMSMLRQTAKATKLLKEMIVKHRLSPKQGALVKLFASLRANKEIWNAVDMIE 1115
+ + S++ +S LR T+ K L EM+ LSP++ LVK A++RANKEI A+++IE
Sbjct: 197 DCYGSLVDNLSELRLTSAIIKTLNEMVAIFGLSPRKETLVKALAAIRANKEIRRAIEVIE 256
Query: 1116 FLEKVGFDVGFESFELVVEGCLECREFVLA 1205
FL G VGFE + V+EGCLE R+F+LA
Sbjct: 257 FLTNEGVHVGFECHQSVLEGCLESRQFLLA 286
Score = 33.1 bits (74), Expect(2) = 4e-76
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 1187 QGVCFGLIFVGEWRLACAVRHRFSALNS 1270
Q V GL +GEW+LA AVR RF+ L S
Sbjct: 306 QKVVEGLTSIGEWKLANAVRQRFAELRS 333