BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025895
         (254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]               84   3e-14
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    84   3e-14
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]      81   1e-13
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr...    74   2e-11
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe...    74   2e-11
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...    70   3e-10
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise...    69   6e-10
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....    69   6e-10
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...    69   8e-10
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...    65   9e-09
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr...    64   2e-08
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_006371932.1| hypothetical protein POPTR_0018s06450g [Popu...    60   3e-07
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...    59   5e-07

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 37/69 (53%), Positives = 51/69 (73%)
 Frame = -3

Query: 207 IEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSD 28
           I +NN+R FANH  +  ++QC+  +Q+KQ HAQMLR GLF DPF+AS+L+T  AL P   
Sbjct: 25  ITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPS 84

Query: 27  ITYARKVFD 1
           + YA++VFD
Sbjct: 85  LDYAQQVFD 93


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 37/69 (53%), Positives = 51/69 (73%)
 Frame = -3

Query: 207 IEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSD 28
           I +NN+R FANH  +  ++QC+  +Q+KQ HAQMLR GLF DPF+AS+L+T  AL P   
Sbjct: 25  ITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPS 84

Query: 27  ITYARKVFD 1
           + YA++VFD
Sbjct: 85  LDYAQQVFD 93


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 37/69 (53%), Positives = 51/69 (73%)
 Frame = -3

Query: 207 IEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSD 28
           I +NN+R FANH  +  ++QC+  +Q+KQ HAQMLR GLF DPF+AS+L+T  AL P   
Sbjct: 25  ITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPS 84

Query: 27  ITYARKVFD 1
           + YA++VFD
Sbjct: 85  LDYAQQVFD 93


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 37/67 (55%), Positives = 50/67 (74%)
 Frame = -3

Query: 201 VNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDIT 22
           VNN+ RF N+ L+  +EQCT ++++KQ HAQMLR GLF DPF+ASKL+T  A+   S + 
Sbjct: 23  VNNDLRFPNYPLLSLIEQCTSLKELKQIHAQMLRTGLFFDPFSASKLITVCAMSSFSSLD 82

Query: 21  YARKVFD 1
           YA +VFD
Sbjct: 83  YAHQVFD 89


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/67 (53%), Positives = 48/67 (71%)
 Frame = -3

Query: 201 VNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDIT 22
           V N+R F NH LV  +++C  ++Q+KQ HA MLR+GLFSDPF+ASKL+   +L   S + 
Sbjct: 27  VINDRYFENHPLVLLIDKCQSIKQLKQIHAYMLRIGLFSDPFSASKLIEASSLSHFSSLD 86

Query: 21  YARKVFD 1
           YA KVFD
Sbjct: 87  YAHKVFD 93


>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1049

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = -3

Query: 201 VNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDIT 22
           VNN+ RF    L+  ++QCT +  +KQ HAQML+  LF DP++ASKL+T  AL P S + 
Sbjct: 78  VNNDLRFPTQLLLPLIDQCTTLNHLKQVHAQMLKTSLFFDPYSASKLITAAALSPFSSLD 137

Query: 21  YARKVFD 1
           YAR+VFD
Sbjct: 138 YARQVFD 144


>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
           gi|557530863|gb|ESR42046.1| hypothetical protein
           CICLE_v10011151mg [Citrus clementina]
          Length = 737

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/79 (43%), Positives = 51/79 (64%)
 Frame = -3

Query: 237 TLEKGTHVQKIEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLL 58
           +L +  +   + VNN  +   H +   ++QC +++Q+KQ H QMLR GLF DP++ASKL 
Sbjct: 10  SLPRHPNTTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLF 69

Query: 57  TPLALPPLSDITYARKVFD 1
           TP AL   S + YAR++FD
Sbjct: 70  TPCALGTFSSLEYAREMFD 88


>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/66 (48%), Positives = 48/66 (72%)
 Frame = -3

Query: 198 NNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDITY 19
           + + RF++H  +  ++QCT ++Q+KQ HAQMLR G+  DP++ASKL+T  AL   S + Y
Sbjct: 23  STDLRFSSHPALSLIDQCTSIKQLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSLDY 82

Query: 18  ARKVFD 1
           AR+VFD
Sbjct: 83  ARQVFD 88


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = -3

Query: 201 VNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDIT 22
           +NN   F NH ++ T+++C+  +Q+K+ HA+MLR GLF DPF+ASKL T  AL   S + 
Sbjct: 17  LNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLD 76

Query: 21  YARKVFD 1
           YAR +FD
Sbjct: 77  YARNLFD 83


>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Citrus sinensis]
          Length = 746

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = -3

Query: 207 IEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSD 28
           + VNN  +   H +   ++QC +++Q+KQ H QMLR GLF DP++ASKL TP AL   S 
Sbjct: 29  LTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSS 88

Query: 27  ITYARKVFD 1
           + YAR++FD
Sbjct: 89  LEYAREMFD 97


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = -3

Query: 201 VNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDIT 22
           V N+R F NH LV  +++   + Q+KQ HA MLR+GLF DPF+ASKL+   +L   S + 
Sbjct: 27  VINDRYFENHPLVLLIDKSQSINQLKQIHAYMLRIGLFFDPFSASKLIEASSLSHFSSLD 86

Query: 21  YARKVFD 1
           YA KVFD
Sbjct: 87  YAHKVFD 93


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 733

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/73 (47%), Positives = 47/73 (64%)
 Frame = -3

Query: 219 HVQKIEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALP 40
           H     VNN+    +  ++  + QCT++ Q+KQ HAQMLR GLF +P++ASKL    AL 
Sbjct: 14  HPTSKTVNNDH---DDPVLSRINQCTNLNQLKQIHAQMLRTGLFFNPYSASKLFAASALS 70

Query: 39  PLSDITYARKVFD 1
           P S + YARKVFD
Sbjct: 71  PFSSLDYARKVFD 83


>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
          Length = 726

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = -3

Query: 201 VNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDIT 22
           ++ ER    H  V  +++CT  +Q+KQ H QMLR GL  DPFAASKL++  AL   S + 
Sbjct: 2   LDKERFLEKHPTVTLIDRCTSQKQLKQIHCQMLRSGLLDDPFAASKLISLSALSDFSSLA 61

Query: 21  YARKVFD 1
           YA+KVFD
Sbjct: 62  YAQKVFD 68


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/66 (50%), Positives = 48/66 (72%)
 Frame = -3

Query: 198 NNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDITY 19
           NNER  + HT +  +++C+ ++Q+KQTHA M+R G+FSDP++ASKL    AL   + + Y
Sbjct: 27  NNER--SRHT-ISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEY 83

Query: 18  ARKVFD 1
           ARKVFD
Sbjct: 84  ARKVFD 89


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/66 (50%), Positives = 48/66 (72%)
 Frame = -3

Query: 198 NNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDITY 19
           NNER  + HT +  +++C++++Q+KQTHA M+R G FSDP++ASKL    AL   + + Y
Sbjct: 27  NNER--SRHT-ISLIDRCSNLRQLKQTHAHMIRTGTFSDPYSASKLFAIAALSSFASLEY 83

Query: 18  ARKVFD 1
           ARKVFD
Sbjct: 84  ARKVFD 89


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
           editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = -3

Query: 198 NNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDITY 19
           NNER  + H  +  +E+C  ++Q+KQTH  M+R G FSDP++ASKL    AL   + + Y
Sbjct: 27  NNER--SRH--ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEY 82

Query: 18  ARKVFD 1
           ARKVFD
Sbjct: 83  ARKVFD 88


>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
           gi|557111205|gb|ESQ51489.1| hypothetical protein
           EUTSA_v10016305mg [Eutrema salsugineum]
          Length = 739

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 46/66 (69%)
 Frame = -3

Query: 198 NNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDITY 19
           NNER  + HTL   +++C  ++Q+KQ HAQM+R GLF+D ++ASKL    AL P + + Y
Sbjct: 27  NNER--SRHTL-SLIDRCADLRQLKQIHAQMVRTGLFNDHYSASKLFAIAALSPFASLDY 83

Query: 18  ARKVFD 1
           A KVFD
Sbjct: 84  ACKVFD 89


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 780

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = -3

Query: 222 THVQKIEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLAL 43
           T   K E  NE    N  +++ ++QCT+  Q+KQ HA MLR   F DP+ ASKLLT  A+
Sbjct: 59  TEAVKGEKGNEVESTN--ILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAI 116

Query: 42  PPLSDITYARKVFD 1
              S + YA+ VF+
Sbjct: 117 SSCSCLIYAKNVFN 130


>ref|XP_006371932.1| hypothetical protein POPTR_0018s06450g [Populus trichocarpa]
           gi|550318175|gb|ERP49729.1| hypothetical protein
           POPTR_0018s06450g [Populus trichocarpa]
          Length = 717

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = -3

Query: 174 HTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSDITYARKVF 4
           H  + ++E+C+++ Q+KQ HAQMLR GLF DPF ASK++   +L     + YAR VF
Sbjct: 46  HPCIVSIEKCSNMSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQDSGSLQYARLVF 102


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = -3

Query: 207 IEVNNERRFANHTLVKTLEQCTHVQQIKQTHAQMLRLGLFSDPFAASKLLTPLALPPLSD 28
           +  NNE++    T+   +++C + + +KQ HA MLR GLF DP +A+KL T  AL   S 
Sbjct: 20  LTANNEQKSNPSTVPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSS 79

Query: 27  ITYARKVFD 1
           + YA KVFD
Sbjct: 80  LDYACKVFD 88