BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025887
         (1254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   599   e-169
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   595   e-167
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   564   e-158
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     517   e-144
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   516   e-144
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   516   e-143
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   516   e-143
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         516   e-143
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   516   e-143
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   516   e-143
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   516   e-143
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     516   e-143
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     516   e-143
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   516   e-143
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...   515   e-143
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        515   e-143
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   515   e-143
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]     515   e-143
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   515   e-143
emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]         515   e-143

>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  599 bits (1544), Expect = e-169
 Identities = 279/396 (70%), Positives = 340/396 (85%)
 Frame = +1

Query: 67   EPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVDLPQGCKALGCKWIFKTKLKTDG 246
            EP+TFKEA+++ +   WKEA+KSEIDSI+QNHTWELV+LP GCK L  KWIFK K+K DG
Sbjct: 764  EPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVBLPLGCKPLSSKWIFKRKMKVDG 823

Query: 247  SIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXXXXXXXXXNLEIHQMDVKTAFLN 426
            SIDK+KARLV++G+RQ EG D+FDTYSPVTRI S           NLEIHQMDVKTAFLN
Sbjct: 824  SIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLN 883

Query: 427  GELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAPKQWHEKFDNVMMSNGFSINECD 606
            G+L+EEIYM+QPEG+  PGQE KVC+LVKSLYGLKQAPKQWHEKFDNVM+S+GF INECD
Sbjct: 884  GDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECD 943

Query: 607  KCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNMLSGKFDMKDMGLADVILGIKIT 786
            KC+Y KDT +GY+++CLYVDDMLI+GS+  MI  TKNML+ +FDMKDMGLADVILGIKI 
Sbjct: 944  KCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIK 1003

Query: 787  RHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLHLTKNSGDAVSQLEYARVIGSLM 966
            R S+ +ILSQ+H+ +K+L +F   +SG+A++PVD  LHL+KN G++VSQ+EY+R+IGSLM
Sbjct: 1004 RTSBELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLM 1063

Query: 967  YLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNYLRYTQSYGLHYGKYPAVLEGYS 1146
            YL +CTRPD+A++V+ LSRYTSNPG KHW+GI RVL YLR+T+ YGLHY +YPAVLEGYS
Sbjct: 1064 YLMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYS 1123

Query: 1147 DANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            DANWIS+ ++SKS SGYVFTLGGAAVSWKSSKQ ++
Sbjct: 1124 DANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQXVI 1159


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  595 bits (1533), Expect = e-167
 Identities = 283/418 (67%), Positives = 345/418 (82%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R EK++G +F+T F+LE EP+TFKEA+++ +   WKEA+KSEIDSI+QNHTWELVD
Sbjct: 792  SKRVRTEKSFGPDFLT-FMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVD 850

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
            LP GCK L  KWIFK K+K DGSIDK+KARLV++G+RQ EG D+FDTYSPVTRI S    
Sbjct: 851  LPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMV 910

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                   NLEIHQMD+K          EIYM+QPEG+  PGQE KVC+LVKSLYGLKQAP
Sbjct: 911  LAIAALRNLEIHQMDMK----------EIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAP 960

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFDNVM+S+GF INECDKC+Y KDT +GY+++CLYVDDMLI+GS+  MI  TKNM
Sbjct: 961  KQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNM 1020

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            L+ +FDMKDMGLADVILGIKI R S  +ILSQ+H+ +K+L +F   +SG+A++PVD  LH
Sbjct: 1021 LNSRFDMKDMGLADVILGIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLH 1080

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L+KN G++VSQ+EY+R+IGSLMYL +CTRPD+A++V  LSRYTSNPG KHW+GI RVL Y
Sbjct: 1081 LSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKY 1140

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            LR+T+ Y LHY +YPAVLEGYSDANWIS+ ++SKS SGYVFTLGGAAVSWKSSKQT++
Sbjct: 1141 LRFTRDYXLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVI 1198


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  564 bits (1453), Expect = e-158
 Identities = 267/390 (68%), Positives = 325/390 (83%), Gaps = 1/390 (0%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R EK++G +F+T F+LE EP+TFKEA+++ +   WKEA+KSEIDSI+QNHTWELVD
Sbjct: 575  SKRVRTEKSFGPDFLT-FMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVD 633

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
            LP GCK L  KWIFK K+K DGSIDK+KARLV++G+RQ EG D+FDTYSPVTRI S    
Sbjct: 634  LPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMV 693

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                   NLEIHQMDVKTAFLNG+L+EEIYM+QPEG+  PGQE KVC+LVKSLYGLKQAP
Sbjct: 694  LAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAP 753

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFDNVM+S+GF INECDKC+Y KDT +GY+++CLYVDDMLI+GS+  MI  TKNM
Sbjct: 754  KQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNM 813

Query: 721  LSGK-FDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHL 897
            L  +    KDMGLADVILGIKI R S  +ILSQ+H+ +K+L +F   +SG+A++PVD  L
Sbjct: 814  LQIQGLTSKDMGLADVILGIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTL 873

Query: 898  HLTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLN 1077
            HL+KN G++VSQ+EY+R+IGSLMYL +CTRPD+A++V  LSRYTSNPG KHW+GI RVL 
Sbjct: 874  HLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLK 933

Query: 1078 YLRYTQSYGLHYGKYPAVLEGYSDANWISD 1167
            YLR+T+ YGLHY +YPAVLEGYSDANWIS+
Sbjct: 934  YLRFTRDYGLHYTRYPAVLEGYSDANWISN 963


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  517 bits (1332), Expect = e-144
 Identities = 244/418 (58%), Positives = 317/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY +YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTRYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  516 bits (1330), Expect = e-144
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTMELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 562  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 620

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 621  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 680

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 681  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 740

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 741  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 800

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 801  LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 860

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 861  LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 920

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 921  LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 978


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 985  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 1043

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 1044 RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 1103

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 1104 LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1163

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 1164 KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1223

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1224 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1283

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1284 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1343

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1344 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1401


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 858  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 916

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 917  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 976

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 977  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1036

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 1037 KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1096

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1097 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1156

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1157 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1216

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1217 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1274


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 1183 SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 1241

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 1242 RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 1301

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 1302 LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1361

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 1362 KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1421

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1422 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1481

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1482 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1541

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1542 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1599


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  516 bits (1328), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2027

 Score =  515 bits (1327), Expect = e-143
 Identities = 244/418 (58%), Positives = 315/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 964  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 1022

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 1023 RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 1082

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 1083 LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1142

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF +NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 1143 KQWHEKFDKTLTSAGFGVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1202

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1203 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1262

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1263 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1322

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1323 LKDTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1380


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  515 bits (1327), Expect = e-143
 Identities = 244/418 (58%), Positives = 315/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 741  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 799

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 800  QPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 859

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 860  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 919

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF +NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 920  KQWHEKFDKTLTSAGFGVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 979

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 980  LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1039

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1040 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1099

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1100 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1157


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  515 bits (1327), Expect = e-143
 Identities = 243/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+V+ GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score =  515 bits (1327), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMYQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  515 bits (1327), Expect = e-143
 Identities = 243/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 769  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 827

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 828  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 887

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+V+ GQE KVC+L+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAP 947

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 1007

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 1008 LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLS 1067

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 1068 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 1127

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 1128 LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 1185


>emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
          Length = 1113

 Score =  515 bits (1327), Expect = e-143
 Identities = 244/418 (58%), Positives = 316/418 (75%)
 Frame = +1

Query: 1    SKRARKEKTYGQEFITAFLLENEPRTFKEAMSTPDAPSWKEAVKSEIDSIMQNHTWELVD 180
            SKR R  K++G +F T +L+++ P++  EA ++PDA  WKEAV+SE+DSI+ N TWE+ +
Sbjct: 562  SKRQRTAKSFGDDF-TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE 620

Query: 181  LPQGCKALGCKWIFKTKLKTDGSIDKHKARLVVQGFRQKEGQDFFDTYSPVTRITSXXXX 360
             P GCK +GCKW+FK KL+ DG+I+K+KARLV +G+ QKEG+DFFDTYSPV R+T+    
Sbjct: 621  RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 680

Query: 361  XXXXXXXNLEIHQMDVKTAFLNGELEEEIYMKQPEGYVVPGQEHKVCRLVKSLYGLKQAP 540
                    L +HQMDVKTAFLNGEL+EEIYM QP+G+VV GQE KVC+L+KSLYGLKQAP
Sbjct: 681  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 740

Query: 541  KQWHEKFDNVMMSNGFSINECDKCIYFKDTPNGYILLCLYVDDMLIIGSNKDMINRTKNM 720
            KQWHEKFD  + S GF++NE DKC+Y++      ++LCLYVDD+LI G+N ++IN  K+ 
Sbjct: 741  KQWHEKFDKTLTSAGFAVNEVDKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSF 800

Query: 721  LSGKFDMKDMGLADVILGIKITRHSEGIILSQAHHAEKVLERFKNYSSGIAKSPVDPHLH 900
            LS  FDMKD+G+ADVIL IK+ R   GI L Q+H+ EK+L RF    S  + +P DP L 
Sbjct: 801  LSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLL 860

Query: 901  LTKNSGDAVSQLEYARVIGSLMYLTNCTRPDLAHSVNVLSRYTSNPGHKHWKGITRVLNY 1080
            L KN   A +QLEY+++IGSLMYL + TRPD++ +V+ LSR+TSNPG  HW+ + RV+ Y
Sbjct: 861  LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 920

Query: 1081 LRYTQSYGLHYGKYPAVLEGYSDANWISDSRNSKSTSGYVFTLGGAAVSWKSSKQTLL 1254
            L+ T   GLHY  YPAVLEGYSD+NWISD    K+TSGYVFTLGG AVSW+S KQT+L
Sbjct: 921  LKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTIL 978