BLASTX nr result
ID: Rheum21_contig00025822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00025822
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC33111.1| TIMELESS-interacting protein [Morus notabilis] 124 1e-26
ref|XP_002518811.1| nucleic acid binding protein, putative [Rici... 124 2e-26
ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vit... 123 2e-26
ref|XP_002315820.1| zinc knuckle family protein [Populus trichoc... 120 1e-25
ref|XP_004505705.1| PREDICTED: chromosome segregation in meiosis... 117 1e-24
ref|XP_006298245.1| hypothetical protein CARUB_v10014306mg [Caps... 117 1e-24
ref|XP_006590797.1| PREDICTED: TIMELESS-interacting protein-like... 116 3e-24
ref|XP_006590796.1| PREDICTED: TIMELESS-interacting protein-like... 116 3e-24
ref|XP_004171159.1| PREDICTED: TIMELESS-interacting protein-like... 116 3e-24
ref|XP_004139395.1| PREDICTED: TIMELESS-interacting protein-like... 116 3e-24
gb|EMJ28919.1| hypothetical protein PRUPE_ppa009221mg [Prunus pe... 115 5e-24
ref|XP_002882252.1| hypothetical protein ARALYDRAFT_896259 [Arab... 115 5e-24
ref|XP_004236889.1| PREDICTED: chromosome segregation in meiosis... 115 6e-24
ref|XP_006408380.1| hypothetical protein EUTSA_v10021242mg [Eutr... 115 8e-24
ref|NP_186931.2| CCHC-type zinc knuckle protein [Arabidopsis tha... 114 1e-23
ref|XP_006355007.1| PREDICTED: TIMELESS-interacting protein-like... 114 1e-23
ref|XP_004298626.1| PREDICTED: TIMELESS-interacting protein-like... 113 2e-23
ref|XP_006470914.1| PREDICTED: TIMELESS-interacting protein-like... 112 4e-23
ref|XP_006420656.1| hypothetical protein CICLE_v10005530mg [Citr... 112 4e-23
ref|XP_006420655.1| hypothetical protein CICLE_v10005530mg [Citr... 112 4e-23
>gb|EXC33111.1| TIMELESS-interacting protein [Morus notabilis]
Length = 282
Score = 124 bits (312), Expect = 1e-26
Identities = 56/72 (77%), Positives = 63/72 (87%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLSD+GLGY+LRHFPR FK RG GHEVS+L NL+RMY EWHS+LLPYY FDQ
Sbjct: 74 RPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGHEVSDLGNLIRMYGEWHSRLLPYYSFDQ 133
Query: 183 FIHKVEQVGTGK 218
F+HKVEQV K
Sbjct: 134 FVHKVEQVAATK 145
>ref|XP_002518811.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223542192|gb|EEF43736.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 267
Score = 124 bits (310), Expect = 2e-26
Identities = 53/72 (73%), Positives = 65/72 (90%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP++LL D+GLGY+LRHFPRNFK RG GHEVS+L NL+R+YSEWHS+LLPYY +D+
Sbjct: 68 RPKLTPDILLGDDGLGYVLRHFPRNFKYRGRGHEVSDLGNLIRLYSEWHSRLLPYYSYDE 127
Query: 183 FIHKVEQVGTGK 218
F+HKVEQV + K
Sbjct: 128 FVHKVEQVASTK 139
>ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vitis vinifera]
gi|297738277|emb|CBI27478.3| unnamed protein product
[Vitis vinifera]
Length = 291
Score = 123 bits (309), Expect = 2e-26
Identities = 56/72 (77%), Positives = 62/72 (86%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RP LTPELLLSDNGLGY+LRHFP FK RG GHEVS+L NL+ +YSEWHS LLPYY FDQ
Sbjct: 71 RPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIGLYSEWHSHLLPYYSFDQ 130
Query: 183 FIHKVEQVGTGK 218
F+HKVE+VGT K
Sbjct: 131 FVHKVEKVGTTK 142
>ref|XP_002315820.1| zinc knuckle family protein [Populus trichocarpa]
gi|222864860|gb|EEF01991.1| zinc knuckle family protein
[Populus trichocarpa]
Length = 283
Score = 120 bits (302), Expect = 1e-25
Identities = 57/73 (78%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 RPKLTPELLLS-DNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFD 179
RPKLTPELLL DNGLG+ILRHFPRNFK RG GHEVS+L NL+ +YSEWHS LLPYY FD
Sbjct: 78 RPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLGNLIGLYSEWHSHLLPYYSFD 137
Query: 180 QFIHKVEQVGTGK 218
QF+HKVEQV K
Sbjct: 138 QFVHKVEQVAATK 150
>ref|XP_004505705.1| PREDICTED: chromosome segregation in meiosis protein 3-like [Cicer
arietinum]
Length = 283
Score = 117 bits (294), Expect = 1e-24
Identities = 51/72 (70%), Positives = 63/72 (87%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLSD+GLGY+LR+FPRNFK G GHEV +L NL+ +YS+WHS+LLPYYPF+Q
Sbjct: 70 RPKLTPDLLLSDDGLGYVLRYFPRNFKYHGRGHEVRDLGNLIDLYSDWHSRLLPYYPFNQ 129
Query: 183 FIHKVEQVGTGK 218
F+HKVE+V K
Sbjct: 130 FVHKVEKVAATK 141
>ref|XP_006298245.1| hypothetical protein CARUB_v10014306mg [Capsella rubella]
gi|482566954|gb|EOA31143.1| hypothetical protein
CARUB_v10014306mg [Capsella rubella]
Length = 289
Score = 117 bits (294), Expect = 1e-24
Identities = 52/72 (72%), Positives = 64/72 (88%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTPELLLS++GLGY+LR+FP++FK RG G EVS+L NL+R+YSEWHS LLPYY FDQ
Sbjct: 71 RPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHSHLLPYYSFDQ 130
Query: 183 FIHKVEQVGTGK 218
F+HKV+QV + K
Sbjct: 131 FVHKVQQVASTK 142
>ref|XP_006590797.1| PREDICTED: TIMELESS-interacting protein-like isoform X2 [Glycine
max]
Length = 311
Score = 116 bits (291), Expect = 3e-24
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
+PKLTPELLLSD+GLGY+LR+FPR FK RG GHEV +L NLLR+Y+EWHS+LLPYY F+Q
Sbjct: 81 KPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSRLLPYYSFNQ 140
Query: 183 FIHKVEQV 206
F+HKVE+V
Sbjct: 141 FVHKVEKV 148
>ref|XP_006590796.1| PREDICTED: TIMELESS-interacting protein-like isoform X1 [Glycine
max]
Length = 318
Score = 116 bits (291), Expect = 3e-24
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
+PKLTPELLLSD+GLGY+LR+FPR FK RG GHEV +L NLLR+Y+EWHS+LLPYY F+Q
Sbjct: 81 KPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSRLLPYYSFNQ 140
Query: 183 FIHKVEQV 206
F+HKVE+V
Sbjct: 141 FVHKVEKV 148
>ref|XP_004171159.1| PREDICTED: TIMELESS-interacting protein-like [Cucumis sativus]
Length = 284
Score = 116 bits (291), Expect = 3e-24
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTPELLLSD+GLGY+LRHFPR FK RG GHE+++L+NL+ +Y EWHS +LPYY F+
Sbjct: 66 RPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEH 125
Query: 183 FIHKVEQVGTGK 218
F+HKVEQV K
Sbjct: 126 FVHKVEQVAATK 137
>ref|XP_004139395.1| PREDICTED: TIMELESS-interacting protein-like [Cucumis sativus]
Length = 280
Score = 116 bits (291), Expect = 3e-24
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTPELLLSD+GLGY+LRHFPR FK RG GHE+++L+NL+ +Y EWHS +LPYY F+
Sbjct: 66 RPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEH 125
Query: 183 FIHKVEQVGTGK 218
F+HKVEQV K
Sbjct: 126 FVHKVEQVAATK 137
>gb|EMJ28919.1| hypothetical protein PRUPE_ppa009221mg [Prunus persica]
Length = 301
Score = 115 bits (289), Expect = 5e-24
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLSD+GLGY+LRHFPR FK RG G+EV +L NL+ +Y+EWHS+LLPYY FDQ
Sbjct: 84 RPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGNEVRDLGNLIGLYTEWHSRLLPYYSFDQ 143
Query: 183 FIHKVEQVGT 212
F+HKVEQV +
Sbjct: 144 FVHKVEQVAS 153
>ref|XP_002882252.1| hypothetical protein ARALYDRAFT_896259 [Arabidopsis lyrata subsp.
lyrata] gi|297328092|gb|EFH58511.1| hypothetical protein
ARALYDRAFT_896259 [Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 115 bits (289), Expect = 5e-24
Identities = 51/72 (70%), Positives = 63/72 (87%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTPELLLS++GLGY+LR+FP++FK RG G EVS+L NL+R+YSEWHS LLPYY FD
Sbjct: 76 RPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHSHLLPYYSFDH 135
Query: 183 FIHKVEQVGTGK 218
F+HKV+QV + K
Sbjct: 136 FVHKVQQVASTK 147
>ref|XP_004236889.1| PREDICTED: chromosome segregation in meiosis protein 3-like
[Solanum lycopersicum]
Length = 296
Score = 115 bits (288), Expect = 6e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +3
Query: 6 PKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQF 185
PKLTPE+LLSD GLGY+LRHFPR FK RG GHEV++L +LL +Y+EWH+ LLPYY FDQF
Sbjct: 84 PKLTPEILLSDKGLGYVLRHFPRGFKYRGRGHEVADLGHLLGLYAEWHAGLLPYYSFDQF 143
Query: 186 IHKVEQVGTGK 218
IHKVE++G K
Sbjct: 144 IHKVEKLGGSK 154
>ref|XP_006408380.1| hypothetical protein EUTSA_v10021242mg [Eutrema salsugineum]
gi|557109526|gb|ESQ49833.1| hypothetical protein
EUTSA_v10021242mg [Eutrema salsugineum]
Length = 295
Score = 115 bits (287), Expect = 8e-24
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLS++GLGY+LR+FPR+FK RG EVS+L NL+R+YSEWHS LLPYY FDQ
Sbjct: 72 RPKLTPDLLLSEDGLGYVLRYFPRSFKYRGRSKEVSDLGNLIRLYSEWHSHLLPYYSFDQ 131
Query: 183 FIHKVEQVGTGK 218
F+HKV+QV K
Sbjct: 132 FVHKVQQVAATK 143
>ref|NP_186931.2| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|26453004|dbj|BAC43578.1| putative CCHC-type zinc
finger protein [Arabidopsis thaliana]
gi|106879191|gb|ABF82625.1| At3g02820 [Arabidopsis
thaliana] gi|332640342|gb|AEE73863.1| CCHC-type zinc
knuckle protein [Arabidopsis thaliana]
Length = 282
Score = 114 bits (286), Expect = 1e-23
Identities = 50/72 (69%), Positives = 63/72 (87%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTPELLLS++GLGY+LR+FP++FK RG G EVS+L NL+R+YSEWH+ LLPYY FD
Sbjct: 71 RPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTHLLPYYSFDH 130
Query: 183 FIHKVEQVGTGK 218
F+HKV+QV + K
Sbjct: 131 FVHKVQQVASTK 142
>ref|XP_006355007.1| PREDICTED: TIMELESS-interacting protein-like [Solanum tuberosum]
Length = 290
Score = 114 bits (285), Expect = 1e-23
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 6 PKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQF 185
PKLTP++LLSD GLGY+LRHFPR FK RG GHEV++L +LL +Y+EWH+ LLPYY FDQF
Sbjct: 80 PKLTPDILLSDKGLGYVLRHFPRGFKYRGRGHEVADLGHLLGLYAEWHAGLLPYYSFDQF 139
Query: 186 IHKVEQVGTGK 218
IHKVE++G K
Sbjct: 140 IHKVEKLGGSK 150
>ref|XP_004298626.1| PREDICTED: TIMELESS-interacting protein-like [Fragaria vesca subsp.
vesca]
Length = 293
Score = 113 bits (283), Expect = 2e-23
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 RPKLTPELLLSDNG-LGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFD 179
RPKLTPE+LLSD+G LGYILRHFP++FK RG GHEV +L NL+ +Y EWHS+LLPYY FD
Sbjct: 72 RPKLTPEVLLSDDGGLGYILRHFPKSFKYRGRGHEVKDLGNLIGLYREWHSRLLPYYSFD 131
Query: 180 QFIHKVEQV 206
QF+HKVEQV
Sbjct: 132 QFVHKVEQV 140
>ref|XP_006470914.1| PREDICTED: TIMELESS-interacting protein-like [Citrus sinensis]
Length = 296
Score = 112 bits (281), Expect = 4e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLSD+GLG++LRHFPR FK RG GHEVS+L +L+ +YSEWHS LLPYY FD
Sbjct: 78 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDH 137
Query: 183 FIHKVEQVGTGK 218
F+ KVEQV +
Sbjct: 138 FVSKVEQVAASR 149
>ref|XP_006420656.1| hypothetical protein CICLE_v10005530mg [Citrus clementina]
gi|557522529|gb|ESR33896.1| hypothetical protein
CICLE_v10005530mg [Citrus clementina]
Length = 297
Score = 112 bits (281), Expect = 4e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLSD+GLG++LRHFPR FK RG GHEVS+L +L+ +YSEWHS LLPYY FD
Sbjct: 79 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDH 138
Query: 183 FIHKVEQVGTGK 218
F+ KVEQV +
Sbjct: 139 FVSKVEQVAASR 150
>ref|XP_006420655.1| hypothetical protein CICLE_v10005530mg [Citrus clementina]
gi|557522528|gb|ESR33895.1| hypothetical protein
CICLE_v10005530mg [Citrus clementina]
Length = 246
Score = 112 bits (281), Expect = 4e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +3
Query: 3 RPKLTPELLLSDNGLGYILRHFPRNFKLRGPGHEVSNLKNLLRMYSEWHSQLLPYYPFDQ 182
RPKLTP+LLLSD+GLG++LRHFPR FK RG GHEVS+L +L+ +YSEWHS LLPYY FD
Sbjct: 79 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDH 138
Query: 183 FIHKVEQVGTGK 218
F+ KVEQV +
Sbjct: 139 FVSKVEQVAASR 150