BLASTX nr result

ID: Rheum21_contig00025758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025758
         (658 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabac...    92   2e-35
emb|CBI35735.3| unnamed protein product [Vitis vinifera]              112   8e-23
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...    60   5e-18
ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...    91   3e-16
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    87   6e-15
ref|YP_173419.1| hypothetical protein NitaMp077 [Nicotiana tabac...    62   2e-07

>ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabacum]
           gi|56806583|dbj|BAD83484.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 122

 Score = 91.7 bits (226), Expect(3) = 2e-35
 Identities = 51/66 (77%), Positives = 55/66 (83%), Gaps = 4/66 (6%)
 Frame = -3

Query: 488 SVSVL----GFNQTSS*LGREKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYSPSSE 321
           SVSVL    G +++ S L R KESKSMDINEPSLMDVAHDTINSTQGPALIEVAY PSSE
Sbjct: 7   SVSVLWGLSGPSRSFSTLRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSE 66

Query: 320 GKGQGF 303
           GKG+ F
Sbjct: 67  GKGRAF 72



 Score = 69.3 bits (168), Expect(3) = 2e-35
 Identities = 34/36 (94%), Positives = 34/36 (94%)
 Frame = -1

Query: 316 KGRAFPVVIVGGSHEIYAGRRNQTKVERPFDSLRGI 209
           KGRAF VVIVGGSHEIYAGRRNQTKVE PFDSLRGI
Sbjct: 68  KGRAFFVVIVGGSHEIYAGRRNQTKVEGPFDSLRGI 103



 Score = 35.4 bits (80), Expect(3) = 2e-35
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 99  RGIAAPSPGTIPGPSSKQTG 40
           RGIAAPSPG I GPSS++ G
Sbjct: 101 RGIAAPSPGAISGPSSRRAG 120


>emb|CBI35735.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  112 bits (281), Expect = 8e-23
 Identities = 53/63 (84%), Positives = 55/63 (87%)
 Frame = +1

Query: 469 KPRTETEAFRFTPHSLLNKARQGDLGRSAGSFPVVLFPPRERHTEEICPARRRPVESFCC 648
           KPRTETEAFRFTPHSLLNKAR   LGRSAGSFP+VLFPPRER TEE+CPAR   VESFCC
Sbjct: 21  KPRTETEAFRFTPHSLLNKARPRALGRSAGSFPIVLFPPRERRTEEVCPARGGSVESFCC 80

Query: 649 LGR 657
           L R
Sbjct: 81  LSR 83


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 59.7 bits (143), Expect(2) = 5e-18
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = +1

Query: 469 KPRTETEAFRFTPHSLLNKARQGDLGRSAGSFPVVLF 579
           KPRTETEAF FTPHSLLNKAR   LGRSAGSF  +LF
Sbjct: 35  KPRTETEAFLFTPHSLLNKARPRALGRSAGSFLSLLF 71



 Score = 57.8 bits (138), Expect(2) = 5e-18
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 560 LSLLFCSRHEKDTRKKYAQRAEDPLRVSAVS 652
           LSLLFC RHEKD RK+YAQRAEDPLRVS VS
Sbjct: 67  LSLLFCFRHEKDARKRYAQRAEDPLRVSVVS 97


>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 57/101 (56%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
 Frame = -3

Query: 650 RQQKLSTGLLRAGHIS--SVCLSRGGNRTTGKDPADLPRSPWRALFKREWGVNRKASVSV 477
           R  + S  +LRA  I   SV LSRGGNRTTGKDPADLP++  R                 
Sbjct: 46  RYNRHSQRILRAPGIPLPSVRLSRGGNRTTGKDPADLPKARGR----------------- 88

Query: 476 LGFNQTSS*LGREKESKSMDINEPSLMDVAHDTINSTQGPA 354
                    LGR KESKSMDINEPSLMDVAHDTINSTQGPA
Sbjct: 89  ---------LGRGKESKSMDINEPSLMDVAHDTINSTQGPA 120


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 42/46 (91%), Positives = 42/46 (91%)
 Frame = +1

Query: 469 KPRTETEAFRFTPHSLLNKARQGDLGRSAGSFPVVLFPPRERHTEE 606
           KPRTETEAFRFTPHSLLNKAR   LGRSAGSFPVVLFPPRER TEE
Sbjct: 52  KPRTETEAFRFTPHSLLNKARPRALGRSAGSFPVVLFPPRERRTEE 97



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%), Gaps = 2/35 (5%)
 Frame = +2

Query: 68  MVPGEGAAMPRCSAAAGPRTMQKN--RGIKTIVVP 166
           M PGEGAAMPRCSAAAGPRTMQKN  RG+ +IV P
Sbjct: 1   MAPGEGAAMPRCSAAAGPRTMQKNRGRGVSSIVTP 35


>ref|YP_173419.1| hypothetical protein NitaMp077 [Nicotiana tabacum]
           gi|56806582|dbj|BAD83483.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 104

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 35/54 (64%), Positives = 38/54 (70%)
 Frame = -3

Query: 656 LPRQQKLSTGLLRAGHISSVCLSRGGNRTTGKDPADLPRSPWRALFKREWGVNR 495
           +P + KLST   RAG+ SSV LSRGGNRTTGKDPA         LFKREWGVNR
Sbjct: 37  VPYRDKLSTDPPRAGNTSSVRLSRGGNRTTGKDPA----QGELYLFKREWGVNR 86


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