BLASTX nr result
ID: Rheum21_contig00025646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00025646
(643 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 310 3e-82
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 309 5e-82
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 308 9e-82
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 306 3e-81
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 306 3e-81
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 306 3e-81
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 303 2e-80
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 303 3e-80
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 303 3e-80
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 303 4e-80
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752... 302 5e-80
emb|CAE02904.3| OSJNBb0045P24.9 [Oryza sativa Japonica Group] 302 5e-80
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 301 1e-79
emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi... 300 3e-79
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 300 3e-79
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 298 1e-78
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap... 298 1e-78
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 298 1e-78
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja... 298 1e-78
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772... 297 2e-78
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 310 bits (793), Expect = 3e-82
Identities = 149/210 (70%), Positives = 169/210 (80%)
Frame = +2
Query: 14 RVLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPP 193
+ LLA+ D P VA +C+ + D + +LP +V +L E+ DVFP E+PP
Sbjct: 639 KCLLATKSDINELIASPSVAYALVCKDALISLHDMQHSLPPAVANILQEYSDVFPKEVPP 698
Query: 194 GLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPV 373
GLPP+RGIEHQIDLIPGA+LPNR YR NP ET+EIQ QV +LLDKGYVRES S CAVPV
Sbjct: 699 GLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPV 758
Query: 374 LLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRM 553
+LVPKKD +WRMCVDCRAINNITI+YRHPIPRLDDMLDEL G+ FSK+DLRSGYHQIRM
Sbjct: 759 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRM 818
Query: 554 KEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
K GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 819 KLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 848
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 309 bits (791), Expect = 5e-82
Identities = 151/208 (72%), Positives = 168/208 (80%)
Frame = +2
Query: 20 LLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPPGL 199
LLA+ D + VA +C+ + D + +LP + +L E+ DVFP+EIP GL
Sbjct: 644 LLATKTDVNELFASTTVAYALVCKDALISIQDMQHSLPPVITNILQEYSDVFPSEIPEGL 703
Query: 200 PPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPVLL 379
PPIRGIEHQIDLIPGA+LPNR YR NP ET+EIQ QVQ+LLDKGYVRES S CAVPV+L
Sbjct: 704 PPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVIL 763
Query: 380 VPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRMKE 559
VPKKD TWRMCVDCRAINNITI+YRHPIPRLDDMLDEL GA FSK+DLRSGYHQIRMK
Sbjct: 764 VPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKL 823
Query: 560 GDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 824 GDEWKTAFKTKFGLYEWLVMPFGLTNAP 851
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 308 bits (789), Expect = 9e-82
Identities = 148/194 (76%), Positives = 163/194 (84%)
Frame = +2
Query: 62 PDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIP 241
P+ L L TLL +D ++P+ V +L E+ DVFP E P GLPP+RGIEHQIDLIP
Sbjct: 658 PEQVLFILVCKDTLLSANDLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIP 717
Query: 242 GATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDC 421
GATLPNRPAYR NP ET+EIQ QVQ LLDKGYVRES S CAVPV+LVPKKD +WRMCVDC
Sbjct: 718 GATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDC 777
Query: 422 RAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGL 601
RAINNIT++YRHPIPRLDDMLDEL G+ FSKIDLRSG+HQIRMK GDEWKTAFKTKFGL
Sbjct: 778 RAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTKFGL 837
Query: 602 YEWLVMPFGLTNAP 643
YEWLVMPFGLTNAP
Sbjct: 838 YEWLVMPFGLTNAP 851
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 306 bits (785), Expect = 3e-81
Identities = 144/178 (80%), Positives = 156/178 (87%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+PPGLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 699 EDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 758
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S C+VPVLLVPKKD +WRMCVDCRAINNITI+YRHPIPR
Sbjct: 759 TKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPR 818
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDLRSGYHQIRMK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 819 LDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 876
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 306 bits (784), Expect = 3e-81
Identities = 143/178 (80%), Positives = 156/178 (87%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+PPGLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 699 EDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 758
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S C++PVLLVPKKD +WRMCVDCRAINNITI+YRHPIPR
Sbjct: 759 TKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPR 818
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDLRSGYHQIRMK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 819 LDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 876
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 306 bits (784), Expect = 3e-81
Identities = 147/210 (70%), Positives = 168/210 (80%)
Frame = +2
Query: 14 RVLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPP 193
+ LLA+ D P VA +C+ + D + +LP +V +L E+ DVFP E+PP
Sbjct: 618 KCLLATKSDINELIASPSVAYALVCKDALISLHDMQHSLPPAVANILQEYSDVFPKEVPP 677
Query: 194 GLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPV 373
GLPP+RGIEHQIDLIPGA+LPNR YR NP ET+EIQ QV +LLDKGYVRES S CAVPV
Sbjct: 678 GLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPV 737
Query: 374 LLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRM 553
+LVPKKD +WRMCVDCRAINNITI+YRHPIPRLDDMLDEL G+ FSK++LRSGYHQI M
Sbjct: 738 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVELRSGYHQIHM 797
Query: 554 KEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
K GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 798 KLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 827
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 303 bits (777), Expect = 2e-80
Identities = 143/178 (80%), Positives = 155/178 (87%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+PPGLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 595 EDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 654
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S C+VPVLLVPKKD +WRMCVDCRAINNITI+YRHPIPR
Sbjct: 655 TKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPR 714
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDL SGYHQIRMK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 715 LDDMLDELSGSLVFSKIDLCSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 772
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 303 bits (776), Expect = 3e-80
Identities = 143/178 (80%), Positives = 155/178 (87%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +L V LL E+ D+FP E+PPGLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 699 EDTPISLRPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 758
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S C+VPVLLVPKKD +WRMCVDCRAINNITI+YRHPIPR
Sbjct: 759 TKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPR 818
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDLRSGYHQIRMK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 819 LDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 876
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 303 bits (776), Expect = 3e-80
Identities = 142/178 (79%), Positives = 155/178 (87%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+PPGLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 332 EDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 391
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ Q+Q+LLDKGYVRES S C+VPVLLVPKKD +WRMCVDCRAINNITI+YRHPIPR
Sbjct: 392 TKEIQRQMQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPR 451
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ F KIDLRSGYHQIRMK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 452 LDDMLDELSGSLVFYKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 509
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 303 bits (775), Expect = 4e-80
Identities = 147/210 (70%), Positives = 166/210 (79%)
Frame = +2
Query: 14 RVLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPP 193
R LLA+ D P VA +C+ + D + +LP +V +L E+ DVFP E+PP
Sbjct: 733 RYLLATKSDINELIASPSVAYALVCKDALISLHDMQHSLPPAVANILQEYSDVFPKEVPP 792
Query: 194 GLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPV 373
GLP +RGIEHQIDLIPGA+LPNR YR NP ET+EIQ QV +LLDKGYVRES S CAVPV
Sbjct: 793 GLPLVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPV 852
Query: 374 LLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRM 553
+LVPKKD +WRMCVDCRAINN TI+YRHPIPRLDDMLDEL G+ FSK+DLRSGYHQIRM
Sbjct: 853 ILVPKKDGSWRMCVDCRAINNNTIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRM 912
Query: 554 KEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
K GDEWKT FKTKFGLYEWLVMPFGLTNAP
Sbjct: 913 KLGDEWKTTFKTKFGLYEWLVMPFGLTNAP 942
>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
Length = 1295
Score = 302 bits (774), Expect = 5e-80
Identities = 141/177 (79%), Positives = 159/177 (89%)
Frame = +2
Query: 113 DDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTET 292
D ++LP+ V LL +F DVFP+E+P GLPP+RGIEHQIDL+PGA+LPNRPAYR NP ET
Sbjct: 741 DLSSSLPSVVLDLLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGASLPNRPAYRTNPEET 800
Query: 293 QEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPRL 472
+EIQ QV++LLDKGYVRES S CAVPVLLVPKKD +WRMCVDCRAIN IT++YRHPIPRL
Sbjct: 801 KEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRL 860
Query: 473 DDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
DDMLDEL G++ F+KIDLRSGYHQIRMK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 861 DDMLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAP 917
>emb|CAE02904.3| OSJNBb0045P24.9 [Oryza sativa Japonica Group]
Length = 1361
Score = 302 bits (774), Expect = 5e-80
Identities = 147/209 (70%), Positives = 171/209 (81%)
Frame = +2
Query: 17 VLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPPG 196
V+LA+ D + + D+ +C+ + DD +++P V LL ++ DVFP EIPPG
Sbjct: 695 VMLATKCD-IAEMSDDDMCYFLICKQALVSLDDIASSIPPVVTNLLQKYEDVFPAEIPPG 753
Query: 197 LPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPVL 376
LPP+RGIEHQIDLIPGA+LPNR AYR NP ET+EIQ QV+DLLD+GYVR+S S AVPV+
Sbjct: 754 LPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQQQVEDLLDRGYVRQSLSPYAVPVI 813
Query: 377 LVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRMK 556
LVPKKD +WRMCVDCRAINNITI+YRHPIPRLDDMLDEL G+ F+KIDLRSGYHQIRMK
Sbjct: 814 LVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELCGSIIFTKIDLRSGYHQIRMK 873
Query: 557 EGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 874 LGDEWKTAFKTKFGLYEWLVMPFGLTNAP 902
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 301 bits (770), Expect = 1e-79
Identities = 146/211 (69%), Positives = 166/211 (78%)
Frame = +2
Query: 11 SRVLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIP 190
S LLA+ D + V +C+ +D ++LP +V +L EF DVFP ++P
Sbjct: 694 SGCLLATKSDITDLDITTSVCYAFVCKEVLFSFEDMPSSLPPAVINILQEFADVFPQDVP 753
Query: 191 PGLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVP 370
PGLPPIRGIEHQIDLIPGA+LPNR YR NP ET+EI QVQ+LLDKGY+RES S CAVP
Sbjct: 754 PGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIRESLSPCAVP 813
Query: 371 VLLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIR 550
++LVPKKD T RMCVDCR INNITI+YRHPIPRLDDMLDEL G+ FSK+DLRSGYHQIR
Sbjct: 814 IILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSIIFSKVDLRSGYHQIR 873
Query: 551 MKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
MK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 874 MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 904
>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
Japonica Group]
Length = 1134
Score = 300 bits (767), Expect = 3e-79
Identities = 145/210 (69%), Positives = 166/210 (79%)
Frame = +2
Query: 14 RVLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIPP 193
+ LLA+ D P VA +C+ + D + +LP ++ +L E+ DVFP E+PP
Sbjct: 822 KCLLATKSDINELIASPSVAYALVCKDALISLHDMQHSLPPAIANILQEYSDVFPKEVPP 881
Query: 194 GLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVPV 373
GL P+ GIEHQIDLI GA+LPNR YR NP ET+EIQ QV +LLDKGYVRES S CAVPV
Sbjct: 882 GLLPVHGIEHQIDLILGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPV 941
Query: 374 LLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIRM 553
+LVPKKD +WRMCVDCRAINNITI+YRHPIPRLDDMLDEL G+ FSK+DLRSGYHQIRM
Sbjct: 942 ILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRM 1001
Query: 554 KEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
K GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 1002 KLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 1031
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 300 bits (767), Expect = 3e-79
Identities = 147/213 (69%), Positives = 168/213 (78%), Gaps = 2/213 (0%)
Frame = +2
Query: 11 SRVLLASSRDHLVDYLP--PDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNE 184
S LLA+ D +D L V +C+ +D ++LP +V +L EF DVFP +
Sbjct: 682 SACLLATKSD--IDDLDFSKSVCYAFVCKEALFSFEDVPSSLPPAVTNILQEFTDVFPQD 739
Query: 185 IPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCA 364
+PPGLPPIRGIEHQIDLIPGA+LPNR YR NP ET+EI QVQ+LLDKGY+RES S CA
Sbjct: 740 VPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIRESLSPCA 799
Query: 365 VPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQ 544
VP++LVPKKD T RMCVDCR INNITI+YRHPIPRLDDMLDEL G++ FSK+DLRSGYHQ
Sbjct: 800 VPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIFSKVDLRSGYHQ 859
Query: 545 IRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
IRMK GDEWKT FKTKFGLYEWLVMPFGLTNAP
Sbjct: 860 IRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAP 892
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 298 bits (762), Expect = 1e-78
Identities = 141/178 (79%), Positives = 153/178 (85%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+P GLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 548 EDTPISLPPPVTNLLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 607
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S CAVPVLLVPKKD +WRMCVDCRAI+NI I+YRHPIPR
Sbjct: 608 TKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIDNIIIRYRHPIPR 667
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDLRSGYHQIRMK GDEWK AFKTKFGLYEWLVMPFGLTNAP
Sbjct: 668 LDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKAAFKTKFGLYEWLVMPFGLTNAP 725
>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
Length = 1357
Score = 298 bits (762), Expect = 1e-78
Identities = 141/178 (79%), Positives = 153/178 (85%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+P GLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 513 EDTPISLPPPVTNLLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 572
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S CAVPVLLVPKKD +WRMCVDCRAI+NI I+YRHPIPR
Sbjct: 573 TKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIDNIIIRYRHPIPR 632
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDLRSGYHQIRMK GDEWK AFKTKFGLYEWLVMPFGLTNAP
Sbjct: 633 LDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKAAFKTKFGLYEWLVMPFGLTNAP 690
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 298 bits (762), Expect = 1e-78
Identities = 145/211 (68%), Positives = 165/211 (78%)
Frame = +2
Query: 11 SRVLLASSRDHLVDYLPPDVALMSLCQAYTLLGDDDRATLPASVRTLLDEFLDVFPNEIP 190
S LLA+ D + V +C+ +D ++LP +V +L EF DVFP ++P
Sbjct: 697 SGCLLATKSDITDLDITTSVCYAFVCKEVLFSFEDMPSSLPPAVINILQEFADVFPQDVP 756
Query: 191 PGLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEIQNQVQDLLDKGYVRESRSQCAVP 370
PGLPPIRGIEHQIDLIPGA+LPNR YR NP ET+EI QVQ+LLDKGY+RES S CAVP
Sbjct: 757 PGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIRESLSPCAVP 816
Query: 371 VLLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDMLDELHGASTFSKIDLRSGYHQIR 550
++LVPKKD T RMCVDCR INNITI+ RHPIPRLDDMLDEL G+ FSK+DLRSGYHQIR
Sbjct: 817 IILVPKKDGTSRMCVDCRGINNITIRXRHPIPRLDDMLDELSGSIIFSKVDLRSGYHQIR 876
Query: 551 MKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
MK GDEWKTAFKTKFGLYEWLVMPFGLTNAP
Sbjct: 877 MKLGDEWKTAFKTKFGLYEWLVMPFGLTNAP 907
>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1450
Score = 298 bits (762), Expect = 1e-78
Identities = 141/178 (79%), Positives = 153/178 (85%)
Frame = +2
Query: 110 DDDRATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTE 289
+D +LP V LL E+ D+FP E+P GLPPIRGIEHQIDLIPGA+LPNR YR NP E
Sbjct: 606 EDTPISLPPPVTNLLQEYADIFPKEVPLGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEE 665
Query: 290 TQEIQNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPR 469
T+EIQ QVQ+LLDKGYVRES S CAVPVLLVPKKD +WRMCVDCRAI+NI I+YRHPIPR
Sbjct: 666 TKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAIDNIIIRYRHPIPR 725
Query: 470 LDDMLDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDDMLDEL G+ FSKIDLRSGYHQIRMK GDEWK AFKTKFGLYEWLVMPFGLTNAP
Sbjct: 726 LDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKAAFKTKFGLYEWLVMPFGLTNAP 783
>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
Length = 1246
Score = 297 bits (761), Expect = 2e-78
Identities = 138/174 (79%), Positives = 156/174 (89%)
Frame = +2
Query: 122 ATLPASVRTLLDEFLDVFPNEIPPGLPPIRGIEHQIDLIPGATLPNRPAYRINPTETQEI 301
++LP+ V LL +F DVFP+E+P GLPP+RGIEHQIDL+PGA+LPNRPAYR NP ET+EI
Sbjct: 621 SSLPSVVLDLLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGASLPNRPAYRTNPEETKEI 680
Query: 302 QNQVQDLLDKGYVRESRSQCAVPVLLVPKKDNTWRMCVDCRAINNITIKYRHPIPRLDDM 481
Q QV++LLDKGYVRES S CAVPVLLVPKKD +WRMCVDCRAIN IT++YRHPIPRLDDM
Sbjct: 681 QQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINAITVRYRHPIPRLDDM 740
Query: 482 LDELHGASTFSKIDLRSGYHQIRMKEGDEWKTAFKTKFGLYEWLVMPFGLTNAP 643
LDEL G++ F+KIDLRSGYHQIRMK GDEWKT FKTKFGLYEWLVMP GLTNAP
Sbjct: 741 LDELSGSTIFTKIDLRSGYHQIRMKIGDEWKTTFKTKFGLYEWLVMPSGLTNAP 794