BLASTX nr result
ID: Rheum21_contig00025545
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00025545
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773... 139 5e-31
gb|ABA95677.1| retrotransposon protein, putative, Ty1-copia subc... 132 6e-29
ref|XP_002445301.1| hypothetical protein SORBIDRAFT_07g008525 [S... 131 1e-28
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g... 130 1e-28
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 130 1e-28
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777... 130 2e-28
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777... 130 2e-28
gb|ABA96411.1| retrotransposon protein, putative, unclassified [... 130 2e-28
gb|ABA93844.2| retrotransposon protein, putative, unclassified [... 129 3e-28
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum] 129 5e-28
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 127 2e-27
emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group] gi... 127 2e-27
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] 127 2e-27
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group] 126 3e-27
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 126 3e-27
gb|AAL77129.1|AC098566_16 Putative polyprotein [Oryza sativa] gi... 125 5e-27
ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777... 125 6e-27
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 125 8e-27
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 124 1e-26
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 124 1e-26
>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
Length = 1950
Score = 139 bits (349), Expect = 5e-31
Identities = 62/86 (72%), Positives = 77/86 (89%)
Frame = +3
Query: 6 PKATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVL 185
P AT+VFCDNVSAVYM++NPV H+RTK+IEIDIHFVREKVALG+ RVLHVP++ Q+ D++
Sbjct: 1862 PSATVVFCDNVSAVYMTANPVHHKRTKHIEIDIHFVREKVALGEIRVLHVPSSHQFADIM 1921
Query: 186 TKGLPSSFFLEFRSSLCIWEPPVSTA 263
TKGLP++ F EFRSSLC+ EPP +TA
Sbjct: 1922 TKGLPTALFREFRSSLCVREPPAATA 1947
>gb|ABA95677.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 389
Score = 132 bits (331), Expect = 6e-29
Identities = 60/83 (72%), Positives = 73/83 (87%)
Frame = +3
Query: 15 TIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLTKG 194
TIVFC+NVSA+YM++NPV+H+RTK+IEIDIHFVREKVALGQ RVLHVP+T Q+ D++TKG
Sbjct: 304 TIVFCNNVSAIYMTANPVRHRRTKHIEIDIHFVREKVALGQVRVLHVPSTHQFADIMTKG 363
Query: 195 LPSSFFLEFRSSLCIWEPPVSTA 263
LP F +FRSSLCI +PP TA
Sbjct: 364 LPVQLFTDFRSSLCIRDPPAVTA 386
>ref|XP_002445301.1| hypothetical protein SORBIDRAFT_07g008525 [Sorghum bicolor]
gi|241941651|gb|EES14796.1| hypothetical protein
SORBIDRAFT_07g008525 [Sorghum bicolor]
Length = 659
Score = 131 bits (329), Expect = 1e-28
Identities = 61/81 (75%), Positives = 72/81 (88%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+AT+V+CDN+SAVY+SSNPVQHQRTK+IEID+HFVRE+VALG+ARVLHVPTTSQY D T
Sbjct: 578 RATVVYCDNISAVYLSSNPVQHQRTKHIEIDLHFVRERVALGEARVLHVPTTSQYADFFT 637
Query: 189 KGLPSSFFLEFRSSLCIWEPP 251
KGLP+S F EFRSSL + P
Sbjct: 638 KGLPTSVFTEFRSSLNVRGAP 658
>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
gi|255676152|dbj|BAH93014.1| Os05g0235100, partial [Oryza
sativa Japonica Group]
Length = 841
Score = 130 bits (328), Expect = 1e-28
Identities = 59/84 (70%), Positives = 73/84 (86%)
Frame = +3
Query: 12 ATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLTK 191
AT+V+CDNVSAVYM++NPV H+RTK+IEIDIHFVREKVALGQ RVLH+P++ Q+ D++TK
Sbjct: 755 ATVVYCDNVSAVYMAANPVHHRRTKHIEIDIHFVREKVALGQVRVLHLPSSHQFADIMTK 814
Query: 192 GLPSSFFLEFRSSLCIWEPPVSTA 263
GLP F EFRSSLC+ + P STA
Sbjct: 815 GLPVQLFTEFRSSLCVRDNPASTA 838
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 130 bits (328), Expect = 1e-28
Identities = 59/84 (70%), Positives = 73/84 (86%)
Frame = +3
Query: 12 ATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLTK 191
AT+V+CDNVSAVYM++NPV H+RTK+IEIDIHFVREKVALGQ RVLH+P++ Q+ D++TK
Sbjct: 1394 ATVVYCDNVSAVYMAANPVHHRRTKHIEIDIHFVREKVALGQVRVLHLPSSHQFADIMTK 1453
Query: 192 GLPSSFFLEFRSSLCIWEPPVSTA 263
GLP F EFRSSLC+ + P STA
Sbjct: 1454 GLPVQLFTEFRSSLCVRDNPASTA 1477
>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
Length = 2179
Score = 130 bits (326), Expect = 2e-28
Identities = 59/75 (78%), Positives = 70/75 (93%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+AT+V+CDNVSAVY+S+NPVQHQRTK+IEID+HFVRE+VALG+ RVLHVPTTSQY D+ T
Sbjct: 1457 RATVVYCDNVSAVYLSTNPVQHQRTKHIEIDLHFVRERVALGEVRVLHVPTTSQYADIFT 1516
Query: 189 KGLPSSFFLEFRSSL 233
KGLP+S F EFRSSL
Sbjct: 1517 KGLPTSVFTEFRSSL 1531
>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
Length = 1188
Score = 130 bits (326), Expect = 2e-28
Identities = 59/83 (71%), Positives = 73/83 (87%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+ATIV+CDN+SAVY+S+NPVQHQRTK++EID+HFVRE+VALG+ RVLHVPT+SQY D+ T
Sbjct: 1074 RATIVYCDNISAVYLSTNPVQHQRTKHVEIDLHFVRERVALGEVRVLHVPTSSQYADIFT 1133
Query: 189 KGLPSSFFLEFRSSLCIWEPPVS 257
KGLP+S F EFRSSL + P S
Sbjct: 1134 KGLPTSVFTEFRSSLNVRGAPTS 1156
>gb|ABA96411.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 256
Score = 130 bits (326), Expect = 2e-28
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
KAT+V+CDNVSA+Y+SSNPVQHQRTK++EID+HFVR+KVALG RVLHVPT+SQY D+ T
Sbjct: 169 KATLVYCDNVSAIYLSSNPVQHQRTKHVEIDLHFVRDKVALGAVRVLHVPTSSQYADIFT 228
Query: 189 KGLPSSFFLEFRSSLCIWEPPVSTA 263
KGLPS F+EFRSSL + V TA
Sbjct: 229 KGLPSPVFVEFRSSLNVRSNNVVTA 253
>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1099
Score = 129 bits (325), Expect = 3e-28
Identities = 58/75 (77%), Positives = 70/75 (93%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
KAT+V+CDNVSAVY+S+NPVQHQRTK++EID+HFVR++VA+G RVLHVPTTSQY D+ T
Sbjct: 1022 KATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRDRVAVGSVRVLHVPTTSQYADIFT 1081
Query: 189 KGLPSSFFLEFRSSL 233
KGLPSS F+EFRSSL
Sbjct: 1082 KGLPSSLFVEFRSSL 1096
>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
Length = 534
Score = 129 bits (323), Expect = 5e-28
Identities = 60/81 (74%), Positives = 70/81 (86%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+AT+V+CDNVSAVY+SSNPVQHQRTK++EID+HFVR KVALG RV HVPTTSQY DV T
Sbjct: 453 RATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRVKVALGHVRVTHVPTTSQYADVFT 512
Query: 189 KGLPSSFFLEFRSSLCIWEPP 251
KGLP+S F EFRSSL + + P
Sbjct: 513 KGLPTSVFQEFRSSLTVSDAP 533
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 127 bits (319), Expect = 2e-27
Identities = 58/75 (77%), Positives = 69/75 (92%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
KAT+V+CDNVSAVY+SSNPVQHQRTK+++ID+HFVR+KVALG RVLHVPT+SQY D+ T
Sbjct: 1510 KATLVYCDNVSAVYLSSNPVQHQRTKHVKIDLHFVRDKVALGAVRVLHVPTSSQYADIFT 1569
Query: 189 KGLPSSFFLEFRSSL 233
KGLPS F+EFRSSL
Sbjct: 1570 KGLPSPVFVEFRSSL 1584
>emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group]
gi|38605921|emb|CAE05956.3| OSJNBb0088C09.15 [Oryza
sativa Japonica Group]
Length = 1246
Score = 127 bits (319), Expect = 2e-27
Identities = 58/83 (69%), Positives = 70/83 (84%)
Frame = +3
Query: 15 TIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLTKG 194
T+VFCDNVSA YM++NPV H+ TK+IEIDIHFVREKVALGQ RVLHVP+T Q+ D +TKG
Sbjct: 1161 TVVFCDNVSAAYMTANPVHHRCTKHIEIDIHFVREKVALGQVRVLHVPSTHQFPDFMTKG 1220
Query: 195 LPSSFFLEFRSSLCIWEPPVSTA 263
LP F +FRSSLC+ +PP +TA
Sbjct: 1221 LPVQLFTDFRSSLCVRDPPAATA 1243
>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
Length = 1455
Score = 127 bits (319), Expect = 2e-27
Identities = 58/83 (69%), Positives = 70/83 (84%)
Frame = +3
Query: 15 TIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLTKG 194
T+VFCDNVSA YM++NPV H+ TK+IEIDIHFVREKVALGQ RVLHVP+T Q+ D +TKG
Sbjct: 1370 TVVFCDNVSAAYMTANPVHHRCTKHIEIDIHFVREKVALGQVRVLHVPSTHQFPDFMTKG 1429
Query: 195 LPSSFFLEFRSSLCIWEPPVSTA 263
LP F +FRSSLC+ +PP +TA
Sbjct: 1430 LPVQLFTDFRSSLCVRDPPAATA 1452
>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
Length = 811
Score = 126 bits (316), Expect = 3e-27
Identities = 57/75 (76%), Positives = 68/75 (90%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+AT+V+CDNVSAVY+SSNPVQHQRTK++EID+HFVRE+VA+G RVLHVPTTSQY D+ T
Sbjct: 734 RATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRERVAVGAVRVLHVPTTSQYADIFT 793
Query: 189 KGLPSSFFLEFRSSL 233
KGLP+ F EFRSSL
Sbjct: 794 KGLPTPVFTEFRSSL 808
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 126 bits (316), Expect = 3e-27
Identities = 57/75 (76%), Positives = 68/75 (90%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+AT+V+CDNVSAVY+SSNPVQHQRTK++EID+HFVRE+VA+G RVLHVPTTSQY D+ T
Sbjct: 1602 RATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRERVAVGAVRVLHVPTTSQYADIFT 1661
Query: 189 KGLPSSFFLEFRSSL 233
KGLP+ F EFRSSL
Sbjct: 1662 KGLPTPVFTEFRSSL 1676
>gb|AAL77129.1|AC098566_16 Putative polyprotein [Oryza sativa] gi|31430511|gb|AAP52413.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1264
Score = 125 bits (315), Expect = 5e-27
Identities = 57/85 (67%), Positives = 73/85 (85%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+AT+V+CDNVSA+Y+S+NPVQHQRTK++EID+HFV ++VA G RVLHVPTTSQY D+ T
Sbjct: 1167 RATLVYCDNVSAIYLSTNPVQHQRTKHVEIDLHFVHDRVAAGSVRVLHVPTTSQYADIFT 1226
Query: 189 KGLPSSFFLEFRSSLCIWEPPVSTA 263
KGLP+S F+EFRSSL + V+TA
Sbjct: 1227 KGLPTSIFVEFRSSLNVRCTNVATA 1251
>ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777694 [Setaria italica]
Length = 1416
Score = 125 bits (314), Expect = 6e-27
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +3
Query: 9 KATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLT 188
+ +V+CDN+S +YMSSNP+QHQRTK++EID+HFVRE+VA G+ RVLHVPTTSQY D+ T
Sbjct: 1329 RTALVYCDNISTMYMSSNPIQHQRTKHVEIDLHFVRERVATGEVRVLHVPTTSQYADIFT 1388
Query: 189 KGLPSSFFLEFRSSLCIWEPPVSTA 263
KGLPSS F EFRSSL + TA
Sbjct: 1389 KGLPSSVFTEFRSSLNVQATDAQTA 1413
>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
gi|241947225|gb|EES20370.1| hypothetical protein
SORBIDRAFT_0019s003280 [Sorghum bicolor]
Length = 761
Score = 125 bits (313), Expect = 8e-27
Identities = 59/84 (70%), Positives = 71/84 (84%)
Frame = +3
Query: 12 ATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVLTK 191
A +V+CDNVSAVY+S+NPVQHQRTK++EID+HFVRE+VA+G RVLHVPTTSQ+ DV TK
Sbjct: 675 ACLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRERVAIGVVRVLHVPTTSQFADVFTK 734
Query: 192 GLPSSFFLEFRSSLCIWEPPVSTA 263
GLPSS F +FRSSL + V TA
Sbjct: 735 GLPSSVFTDFRSSLNVQPATVLTA 758
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 124 bits (311), Expect = 1e-26
Identities = 56/86 (65%), Positives = 71/86 (82%)
Frame = +3
Query: 6 PKATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVL 185
P+ATI +CDN+S+VYMS NPV H+RTK+IE+DIHFVREKVALG+ RVL +P+ Q+ DV
Sbjct: 1286 PQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVREKVALGELRVLPIPSAHQFADVF 1345
Query: 186 TKGLPSSFFLEFRSSLCIWEPPVSTA 263
TKGLPSS F EFR+SLC+ + +TA
Sbjct: 1346 TKGLPSSMFNEFRASLCVGDTTAATA 1371
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 124 bits (311), Expect = 1e-26
Identities = 56/86 (65%), Positives = 71/86 (82%)
Frame = +3
Query: 6 PKATIVFCDNVSAVYMSSNPVQHQRTKYIEIDIHFVREKVALGQARVLHVPTTSQYVDVL 185
P+ATI +CDN+S+VYMS NPV H+RTK+IE+DIHFVREKVALG+ RVL +P+ Q+ DV
Sbjct: 1289 PQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVREKVALGELRVLPIPSAHQFADVF 1348
Query: 186 TKGLPSSFFLEFRSSLCIWEPPVSTA 263
TKGLPSS F EFR+SLC+ + +TA
Sbjct: 1349 TKGLPSSMFNEFRASLCVGDTTAATA 1374