BLASTX nr result
ID: Rheum21_contig00025517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00025517 (528 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADZ93628.1| photosystem II CP43 protein [Juncus effusus] 62 1e-07 gb|AFA27431.1| photosystem II CP43 chlorophyll apoprotein [Juncu... 62 1e-07 gb|AEX01597.1| photosystem II CP43 [Maundia triglochinoides] 62 1e-07 gb|AEX95695.1| photosystem II CP43 chlorophyll apoprotein (chlor... 62 1e-07 gb|AAS60064.1| photosystem II CP43 protein [Doryanthes palmeri] 62 1e-07 gb|AAN32608.1| photosystem II CP43 protein [Narcissus elegans] 62 1e-07 gb|ADO33444.1| photosystem II CP43 chlorophyll apoprotein [Smila... 60 2e-07 gb|ABR21927.1| photosystem II CP43 protein [Bouteloua curtipendula] 60 2e-07 ref|NP_039367.1| photosystem II 44 kDa protein [Oryza sativa Jap... 60 3e-07 emb|CAA32263.1| unnamed protein product [Hordeum vulgare subsp. ... 60 3e-07 ref|YP_008993961.1| photosystem II 44 kDa protein (chloroplast) ... 60 3e-07 ref|YP_008855077.1| photosystem II CP43 chlorophyll apoprotein (... 60 3e-07 ref|YP_008815737.1| photosystem II CP43 chlorophyll apoprotein [... 60 3e-07 ref|YP_008239158.1| photosystem II CP43 chlorophyll apoprotein (... 60 3e-07 ref|YP_008080490.1| photosystem II protein C (chloroplast) [Phar... 60 3e-07 gb|AGC38232.1| photosystem II 44 kDa protein (chloroplast) [Cryp... 60 3e-07 ref|YP_054615.1| photosystem II 44 kDa protein [Saccharum hybrid... 60 3e-07 dbj|BAD17353.1| rice chloroplast PSII 43kDa protein [Oryza sativ... 60 3e-07 sp|P10804.1|PSBC_SECCE RecName: Full=Photosystem II CP43 chlorop... 60 3e-07 emb|CAC35458.1| unnamed protein product [Secale cereale] 60 3e-07 >gb|ADZ93628.1| photosystem II CP43 protein [Juncus effusus] Length = 418 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTFALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|AFA27431.1| photosystem II CP43 chlorophyll apoprotein [Juncus effusus] Length = 473 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTFALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|AEX01597.1| photosystem II CP43 [Maundia triglochinoides] Length = 418 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTFALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|AEX95695.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Doryanthes palmeri] Length = 473 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTFALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|AAS60064.1| photosystem II CP43 protein [Doryanthes palmeri] Length = 418 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTFALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|AAN32608.1| photosystem II CP43 protein [Narcissus elegans] Length = 418 Score = 61.6 bits (148), Expect = 1e-07 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTFALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|ADO33444.1| photosystem II CP43 chlorophyll apoprotein [Smilax china] Length = 513 Score = 60.5 bits (145), Expect = 2e-07 Identities = 30/40 (75%), Positives = 32/40 (80%) Frame = -2 Query: 398 RGNAL*FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 RGN FNGT ALAGRDQETT FAWWA NA ++LSGKLL Sbjct: 53 RGNL--FNGTLALAGRDQETTGFAWWAGNARLINLSGKLL 90 >gb|ABR21927.1| photosystem II CP43 protein [Bouteloua curtipendula] Length = 418 Score = 60.5 bits (145), Expect = 2e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNAXLINLSGKLL 50 >ref|NP_039367.1| photosystem II 44 kDa protein [Oryza sativa Japonica Group] gi|50233955|ref|YP_052733.1| photosystem II 44 kDa protein [Oryza nivara] gi|109156585|ref|YP_654204.1| photosystem II 44 kDa protein [Oryza sativa Indica Group] gi|378758401|ref|YP_005296405.1| psbC gene product (chloroplast) [Oryza meridionalis] gi|386799157|ref|YP_006280746.1| psbC gene product (chloroplast) [Oryza rufipogon] gi|556927069|ref|YP_008757423.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza rufipogon] gi|68565738|sp|Q6ENJ0.1|PSBC_ORYNI RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|148886634|sp|P0C365.1|PSBC_ORYSA RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|148886635|sp|P0C366.1|PSBC_ORYSI RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|148886636|sp|P0C367.1|PSBC_ORYSJ RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|11965|emb|CAA34014.1| PSII 43kDa protein [Oryza sativa Japonica Group] gi|42795477|gb|AAS46044.1| photosystem II 44 kDa protein [Oryza sativa Indica Group] gi|42795543|gb|AAS46109.1| photosystem II 44 kDa protein [Oryza sativa Japonica Group] gi|42795607|gb|AAS46172.1| photosystem II 44 kDa protein [Oryza sativa Japonica Group] gi|49614979|dbj|BAD26762.1| PSII 43kDa protein [Oryza nivara] gi|290790562|gb|ADD62822.1| photosystem II CP43 chlorophyll apoprotein [Oryza sativa Japonica Group] gi|290790631|gb|ADD62890.1| photosystem II CP43 chlorophyll apoprotein [Oryza meridionalis] gi|290790700|gb|ADD62958.1| photosystem II CP43 chlorophyll apoprotein [Oryza australiensis] gi|336326825|gb|AEI53003.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza meridionalis] gi|336326901|gb|AEI53078.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza rufipogon] gi|336326979|gb|AEI53155.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza rufipogon] gi|353685041|gb|AER12806.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza sativa Indica Group] gi|353685130|gb|AER12894.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza sativa Indica Group] gi|552954461|gb|AGY48929.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza rufipogon] gi|555945974|gb|AGZ19200.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Oryza rufipogon] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >emb|CAA32263.1| unnamed protein product [Hordeum vulgare subsp. vulgare] Length = 309 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >ref|YP_008993961.1| photosystem II 44 kDa protein (chloroplast) [Pharus lappulaceus] gi|449020245|gb|AGE65742.1| photosystem II 44 kDa protein (chloroplast) [Pharus lappulaceus] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >ref|YP_008855077.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Phragmites australis] gi|558614276|gb|AHA82286.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Phragmites australis] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >ref|YP_008815737.1| photosystem II CP43 chlorophyll apoprotein [Setaria italica] gi|555298029|gb|AGZ13131.1| photosystem II CP43 chlorophyll apoprotein [Setaria italica] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >ref|YP_008239158.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Secale cereale] gi|521301256|gb|AGP51055.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Secale cereale] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >ref|YP_008080490.1| photosystem II protein C (chloroplast) [Pharus latifolius] gi|336280789|gb|AEI29077.1| photosystem II protein C (chloroplast) [Pharus latifolius] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >gb|AGC38232.1| photosystem II 44 kDa protein (chloroplast) [Cryptochloa strictiflora] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >ref|YP_054615.1| photosystem II 44 kDa protein [Saccharum hybrid cultivar NCo 310] gi|75255223|sp|Q6ENY0.1|PSBC_SACOF RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|110826011|sp|P0C158.1|PSBC_SACHY RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|49659496|dbj|BAD27277.1| PSII 44kD protein [Saccharum hybrid cultivar NCo 310] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >dbj|BAD17353.1| rice chloroplast PSII 43kDa protein [Oryza sativa Japonica Group] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >sp|P10804.1|PSBC_SECCE RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName: Full=PSII 43 kDa protein; AltName: Full=Photosystem II 44 kDa reaction center protein; AltName: Full=Protein CP-43; AltName: Full=Protein P6; Flags: Precursor gi|12228|emb|CAA31744.1| putative CP-a2 protein [Secale cereale] Length = 473 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 17 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50 >emb|CAC35458.1| unnamed protein product [Secale cereale] Length = 461 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -2 Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279 FNGTF LAGRDQETT FAWWA NA ++LSGKLL Sbjct: 5 FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 38