BLASTX nr result

ID: Rheum21_contig00025517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00025517
         (528 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ93628.1| photosystem II CP43 protein [Juncus effusus]            62   1e-07
gb|AFA27431.1| photosystem II CP43 chlorophyll apoprotein [Juncu...    62   1e-07
gb|AEX01597.1| photosystem II CP43 [Maundia triglochinoides]           62   1e-07
gb|AEX95695.1| photosystem II CP43 chlorophyll apoprotein (chlor...    62   1e-07
gb|AAS60064.1| photosystem II CP43 protein [Doryanthes palmeri]        62   1e-07
gb|AAN32608.1| photosystem II CP43 protein [Narcissus elegans]         62   1e-07
gb|ADO33444.1| photosystem II CP43 chlorophyll apoprotein [Smila...    60   2e-07
gb|ABR21927.1| photosystem II CP43 protein [Bouteloua curtipendula]    60   2e-07
ref|NP_039367.1| photosystem II 44 kDa protein [Oryza sativa Jap...    60   3e-07
emb|CAA32263.1| unnamed protein product [Hordeum vulgare subsp. ...    60   3e-07
ref|YP_008993961.1| photosystem II 44 kDa protein (chloroplast) ...    60   3e-07
ref|YP_008855077.1| photosystem II CP43 chlorophyll apoprotein (...    60   3e-07
ref|YP_008815737.1| photosystem II CP43 chlorophyll apoprotein [...    60   3e-07
ref|YP_008239158.1| photosystem II CP43 chlorophyll apoprotein (...    60   3e-07
ref|YP_008080490.1| photosystem II protein C (chloroplast) [Phar...    60   3e-07
gb|AGC38232.1| photosystem II 44 kDa protein (chloroplast) [Cryp...    60   3e-07
ref|YP_054615.1| photosystem II 44 kDa protein [Saccharum hybrid...    60   3e-07
dbj|BAD17353.1| rice chloroplast PSII 43kDa protein [Oryza sativ...    60   3e-07
sp|P10804.1|PSBC_SECCE RecName: Full=Photosystem II CP43 chlorop...    60   3e-07
emb|CAC35458.1| unnamed protein product [Secale cereale]               60   3e-07

>gb|ADZ93628.1| photosystem II CP43 protein [Juncus effusus]
          Length = 418

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTFALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|AFA27431.1| photosystem II CP43 chlorophyll apoprotein [Juncus effusus]
          Length = 473

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTFALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|AEX01597.1| photosystem II CP43 [Maundia triglochinoides]
          Length = 418

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTFALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|AEX95695.1| photosystem II CP43 chlorophyll apoprotein (chloroplast)
           [Doryanthes palmeri]
          Length = 473

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTFALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|AAS60064.1| photosystem II CP43 protein [Doryanthes palmeri]
          Length = 418

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTFALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|AAN32608.1| photosystem II CP43 protein [Narcissus elegans]
          Length = 418

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTFALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFALAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|ADO33444.1| photosystem II CP43 chlorophyll apoprotein [Smilax china]
          Length = 513

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = -2

Query: 398 RGNAL*FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           RGN   FNGT ALAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 53  RGNL--FNGTLALAGRDQETTGFAWWAGNARLINLSGKLL 90


>gb|ABR21927.1| photosystem II CP43 protein [Bouteloua curtipendula]
          Length = 418

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNAXLINLSGKLL 50


>ref|NP_039367.1| photosystem II 44 kDa protein [Oryza sativa Japonica Group]
           gi|50233955|ref|YP_052733.1| photosystem II 44 kDa
           protein [Oryza nivara] gi|109156585|ref|YP_654204.1|
           photosystem II 44 kDa protein [Oryza sativa Indica
           Group] gi|378758401|ref|YP_005296405.1| psbC gene
           product (chloroplast) [Oryza meridionalis]
           gi|386799157|ref|YP_006280746.1| psbC gene product
           (chloroplast) [Oryza rufipogon]
           gi|556927069|ref|YP_008757423.1| photosystem II CP43
           chlorophyll apoprotein (chloroplast) [Oryza rufipogon]
           gi|68565738|sp|Q6ENJ0.1|PSBC_ORYNI RecName:
           Full=Photosystem II CP43 chlorophyll apoprotein;
           AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|148886634|sp|P0C365.1|PSBC_ORYSA
           RecName: Full=Photosystem II CP43 chlorophyll
           apoprotein; AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|148886635|sp|P0C366.1|PSBC_ORYSI
           RecName: Full=Photosystem II CP43 chlorophyll
           apoprotein; AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|148886636|sp|P0C367.1|PSBC_ORYSJ
           RecName: Full=Photosystem II CP43 chlorophyll
           apoprotein; AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|11965|emb|CAA34014.1| PSII 43kDa
           protein [Oryza sativa Japonica Group]
           gi|42795477|gb|AAS46044.1| photosystem II 44 kDa protein
           [Oryza sativa Indica Group] gi|42795543|gb|AAS46109.1|
           photosystem II 44 kDa protein [Oryza sativa Japonica
           Group] gi|42795607|gb|AAS46172.1| photosystem II 44 kDa
           protein [Oryza sativa Japonica Group]
           gi|49614979|dbj|BAD26762.1| PSII 43kDa protein [Oryza
           nivara] gi|290790562|gb|ADD62822.1| photosystem II CP43
           chlorophyll apoprotein [Oryza sativa Japonica Group]
           gi|290790631|gb|ADD62890.1| photosystem II CP43
           chlorophyll apoprotein [Oryza meridionalis]
           gi|290790700|gb|ADD62958.1| photosystem II CP43
           chlorophyll apoprotein [Oryza australiensis]
           gi|336326825|gb|AEI53003.1| photosystem II CP43
           chlorophyll apoprotein (chloroplast) [Oryza
           meridionalis] gi|336326901|gb|AEI53078.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Oryza
           rufipogon] gi|336326979|gb|AEI53155.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Oryza
           rufipogon] gi|353685041|gb|AER12806.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Oryza sativa
           Indica Group] gi|353685130|gb|AER12894.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Oryza sativa
           Indica Group] gi|552954461|gb|AGY48929.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Oryza
           rufipogon] gi|555945974|gb|AGZ19200.1| photosystem II
           CP43 chlorophyll apoprotein (chloroplast) [Oryza
           rufipogon]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>emb|CAA32263.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
          Length = 309

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>ref|YP_008993961.1| photosystem II 44 kDa protein (chloroplast) [Pharus lappulaceus]
           gi|449020245|gb|AGE65742.1| photosystem II 44 kDa
           protein (chloroplast) [Pharus lappulaceus]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>ref|YP_008855077.1| photosystem II CP43 chlorophyll apoprotein (chloroplast)
           [Phragmites australis] gi|558614276|gb|AHA82286.1|
           photosystem II CP43 chlorophyll apoprotein (chloroplast)
           [Phragmites australis]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>ref|YP_008815737.1| photosystem II CP43 chlorophyll apoprotein [Setaria italica]
           gi|555298029|gb|AGZ13131.1| photosystem II CP43
           chlorophyll apoprotein [Setaria italica]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>ref|YP_008239158.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Secale
           cereale] gi|521301256|gb|AGP51055.1| photosystem II CP43
           chlorophyll apoprotein (chloroplast) [Secale cereale]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>ref|YP_008080490.1| photosystem II protein C (chloroplast) [Pharus latifolius]
           gi|336280789|gb|AEI29077.1| photosystem II protein C
           (chloroplast) [Pharus latifolius]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>gb|AGC38232.1| photosystem II 44 kDa protein (chloroplast) [Cryptochloa
           strictiflora]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>ref|YP_054615.1| photosystem II 44 kDa protein [Saccharum hybrid cultivar NCo 310]
           gi|75255223|sp|Q6ENY0.1|PSBC_SACOF RecName:
           Full=Photosystem II CP43 chlorophyll apoprotein;
           AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|110826011|sp|P0C158.1|PSBC_SACHY
           RecName: Full=Photosystem II CP43 chlorophyll
           apoprotein; AltName: Full=PSII 43 kDa protein; AltName:
           Full=Photosystem II 44 kDa reaction center protein;
           AltName: Full=Protein CP-43; AltName: Full=Protein P6;
           Flags: Precursor gi|49659496|dbj|BAD27277.1| PSII 44kD
           protein [Saccharum hybrid cultivar NCo 310]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>dbj|BAD17353.1| rice chloroplast PSII 43kDa protein [Oryza sativa Japonica Group]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>sp|P10804.1|PSBC_SECCE RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName:
           Full=PSII 43 kDa protein; AltName: Full=Photosystem II
           44 kDa reaction center protein; AltName: Full=Protein
           CP-43; AltName: Full=Protein P6; Flags: Precursor
           gi|12228|emb|CAA31744.1| putative CP-a2 protein [Secale
           cereale]
          Length = 473

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 17  FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 50


>emb|CAC35458.1| unnamed protein product [Secale cereale]
          Length = 461

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 380 FNGTFALAGRDQETTAFAWWAENALQLHLSGKLL 279
           FNGTF LAGRDQETT FAWWA NA  ++LSGKLL
Sbjct: 5   FNGTFVLAGRDQETTGFAWWAGNARLINLSGKLL 38


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