BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024988
         (322 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              80   3e-13
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              80   3e-13
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...    79   6e-13
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas...    77   3e-12
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...    76   4e-12
ref|XP_006575997.1| PREDICTED: uncharacterized protein LOC100809...    76   5e-12
gb|ADB85432.1| putative retrotransposon protein [Phyllostachys e...    74   3e-11
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali...    74   3e-11
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664...    73   5e-11
gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]         70   2e-10
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-...    70   2e-10
emb|CAN65853.1| hypothetical protein VITISV_004966 [Vitis vinifera]    70   2e-10
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-...    70   2e-10
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...    70   2e-10
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni...    70   2e-10
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]         70   2e-10
gb|ABW04988.1| putative retrotransposon protein, partial [Eleusi...    70   3e-10
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]         70   3e-10
gb|ABA97782.2| retrotransposon protein, putative, Ty3-gypsy subc...    69   5e-10
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]         69   5e-10

>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 31/57 (54%), Positives = 45/57 (78%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQ 25
           +L DV+ M+++HLLLGRPWQFDR+  HDGY N Y F YH +++ L+P++P E+ +DQ
Sbjct: 439 VLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPSEVREDQ 495


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 31/57 (54%), Positives = 45/57 (78%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQ 25
           +L DV+ M+++HLLLGRPWQFDR+  HDGY N Y F YH +++ L+P++P E+ +DQ
Sbjct: 439 VLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPSEVREDQ 495


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 30/58 (51%), Positives = 46/58 (79%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQV 22
           +L DV+ M + H+LLGRPWQ+DRRV HDGYLN Y F  + +++TL+P++P ++ +DQ+
Sbjct: 306 VLCDVVPMHAGHILLGRPWQYDRRVTHDGYLNRYSFVINKRKITLVPLTPRQVYEDQI 363


>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 386

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/58 (55%), Positives = 44/58 (75%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQV 22
           IL DV+ M++ H+LLGRPWQFDR V HDG  NT+ F +   +++LLP+SP EI QD++
Sbjct: 30  ILCDVVPMEAGHILLGRPWQFDRNVFHDGKANTFTFVHKKHKISLLPLSPKEICQDEL 87


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 31/64 (48%), Positives = 47/64 (73%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           IL DV+ M++ H+LLGRPWQ DR+V+HDG+ N + F + G +  L+ M+PHE+ QDQ+  
Sbjct: 296 ILCDVLPMEAGHILLGRPWQSDRKVMHDGFTNRHSFEFKGGKTILVSMTPHEVYQDQIHL 355

Query: 15  DRQK 4
            ++K
Sbjct: 356 KQKK 359


>ref|XP_006575997.1| PREDICTED: uncharacterized protein LOC100809438 [Glycine max]
          Length = 527

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 29/60 (48%), Positives = 49/60 (81%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           I++DV+ M+++HLLLGRPWQ+DR V+H+G  N + F + G++VTL P+SP E+ +++V++
Sbjct: 432 IMFDVVPMEASHLLLGRPWQYDRDVVHNGVTNKFSFVHKGQKVTLKPLSPSEVKEEKVQK 491


>gb|ADB85432.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 870

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 31/62 (50%), Positives = 46/62 (74%)
 Frame = -2

Query: 189 YDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVERDR 10
           +DV+ M +  LLLGRPW +D  VLH G  NTY F++ GK++ LLP++P EI++D+VER +
Sbjct: 541 FDVVPMQACSLLLGRPWIYDNDVLHHGRANTYSFSHRGKKIKLLPLTPAEIVKDEVERAK 600

Query: 9   QK 4
            +
Sbjct: 601 NE 602


>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
           gi|7267450|emb|CAB81146.1| putative polyprotein
           [Arabidopsis thaliana]
          Length = 1054

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 29/58 (50%), Positives = 45/58 (77%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQV 22
           I+ D++ MD++H+LLGRPWQ DR+VL DG+ N   F ++G++ TL+PM+ HE+  DQ+
Sbjct: 433 IMCDILHMDASHILLGRPWQSDRKVLQDGFTNRQTFEHNGRKTTLIPMTLHEVYLDQL 490


>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
          Length = 1176

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 29/66 (43%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVE- 19
           +L DV+ M++TH+LLGRPWQ+D + +HDG+ N   F    K++ L P+SP E+ +DQ++ 
Sbjct: 461 VLCDVVPMEATHVLLGRPWQYDTKAVHDGFTNKISFQQADKKIVLKPLSPQEVCEDQIKM 520

Query: 18  RDRQKA 1
           R+++K+
Sbjct: 521 REKKKS 526


>gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]
          Length = 794

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVERDR 10
           DVI MD+ HLLLGRPWQ+DRR  HDGY NTY F   G ++ L P+ P +  + Q E+D+
Sbjct: 456 DVIPMDACHLLLGRPWQYDRRAHHDGYKNTYSFIKDGAKIMLTPLKPEDCPKKQ-EKDK 513


>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550404|gb|ABA93201.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1297

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 497 DVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 553


>emb|CAN65853.1| hypothetical protein VITISV_004966 [Vitis vinifera]
          Length = 556

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -2

Query: 195 ILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQV 22
           +L DV+ M   HLLLGRPWQFDR V HD + N Y F  +   +TL+P+SP ++ +DQV
Sbjct: 304 VLCDVVLMQVGHLLLGRPWQFDRHVKHDDFTNKYSFVLNQMTITLVPLSPKQVYEDQV 361


>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group]
          Length = 1238

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 475 DVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 531


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 535 DVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 591


>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1234

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 501 DVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 557


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 650 DVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 706


>gb|ABW04988.1| putative retrotransposon protein, partial [Eleusine coracana]
          Length = 172

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = -2

Query: 198 TILYDVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVE 19
           ++ YDV+ M +  LLLGRPW+FD   +H G  N Y F + G ++TLLPM+P EI+Q  +E
Sbjct: 10  SVYYDVVPMQACSLLLGRPWEFDVDAVHHGKSNKYTFMHKGNKITLLPMTPAEIVQADLE 69

Query: 18  R 16
           R
Sbjct: 70  R 70


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 556 DVLPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 612


>gb|ABA97782.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1048

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M + ++LLGRPWQFDR  +H G  N Y F YH +++ L P+SP EIL+D V +
Sbjct: 476 DVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHARKIVLHPISPEEILRDDVAK 532


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/57 (52%), Positives = 39/57 (68%)
 Frame = -2

Query: 186 DVIAMDSTHLLLGRPWQFDRRVLHDGYLNTYVFTYHGKRVTLLPMSPHEILQDQVER 16
           DV+ M   ++LLGRPWQFDR  +H G  N Y F YH K++ L PMSP +IL+D V +
Sbjct: 447 DVVPMQVCNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAK 503