BLASTX nr result
ID: Rheum21_contig00024974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024974
(1108 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256... 122 2e-25
ref|XP_002316817.2| hypothetical protein POPTR_0011s07070g [Popu... 119 2e-24
ref|XP_004293969.1| PREDICTED: uncharacterized protein LOC101302... 114 9e-23
ref|XP_006358113.1| PREDICTED: SAP-like protein BP-73-like [Sola... 113 1e-22
gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theob... 113 2e-22
gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theob... 113 2e-22
gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis] 112 3e-22
ref|XP_004233069.1| PREDICTED: uncharacterized protein LOC101255... 109 2e-21
ref|XP_002305062.1| hypothetical protein POPTR_0004s05800g [Popu... 106 2e-20
gb|EMJ14672.1| hypothetical protein PRUPE_ppa023922mg, partial [... 100 8e-19
ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [A... 100 2e-18
ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm... 92 3e-16
emb|CAB37459.1| hypothetical protein [Arabidopsis thaliana] gi|7... 89 2e-15
ref|XP_006467623.1| PREDICTED: SAP-like protein BP-73-like [Citr... 86 3e-14
ref|XP_006414064.1| hypothetical protein EUTSA_v10026132mg [Eutr... 85 5e-14
ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana] g... 85 6e-14
ref|XP_006449534.1| hypothetical protein CICLE_v10016384mg [Citr... 81 7e-13
dbj|BAF76883.1| H2B histone-fold-like protein [Nicotiana tabacum] 73 2e-10
ref|XP_002867979.1| hypothetical protein ARALYDRAFT_492985 [Arab... 72 5e-10
ref|NP_974569.1| Rho termination factor [Arabidopsis thaliana] g... 69 3e-09
>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
gi|297740528|emb|CBI30710.3| unnamed protein product
[Vitis vinifera]
Length = 262
Score = 122 bits (307), Expect = 2e-25
Identities = 82/211 (38%), Positives = 135/211 (63%), Gaps = 7/211 (3%)
Frame = -2
Query: 906 SSSVSDGNRKKRPFKRNYAMDDRSSQEDERRLPRGSSSGKWS---SQNRLLTLFKQIETS 736
SS SDGNR+ RP ++N+ + R+ + D+ + P SS GK S +Q+ ++ LF++I++S
Sbjct: 54 SSIKSDGNRRGRPPRKNH-ISGRTEKGDKNKTPP-SSDGKLSESSNQDEIIALFRRIQSS 111
Query: 735 ISQEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQ-TLNEGSDSMSNYK--TE 565
IS+ ++ T +R S S S +SVLE L++S KG+ + EG ++ + +
Sbjct: 112 ISKGESLGTKKRISDSSVD--KTSAESVLEILRQSRKQVKGRPSKKEGGQVLTQRRGVPK 169
Query: 564 KEPSLPEPEASA-FKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLELE 388
K+ +P+ + A K+ RPPS+F+K++ IPS + K+++L S+ +E ++E
Sbjct: 170 KDQGIPDKQYVADLKSARPPSNFVKRSPIPSPTNPRGKAVKLKNEVSVRTTSFNELPKVE 229
Query: 387 KMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
+MK+T+LKELAK+RG+KGYSK+KKSELV LL
Sbjct: 230 EMKVTELKELAKSRGIKGYSKMKKSELVELL 260
>ref|XP_002316817.2| hypothetical protein POPTR_0011s07070g [Populus trichocarpa]
gi|550327847|gb|EEE97429.2| hypothetical protein
POPTR_0011s07070g [Populus trichocarpa]
Length = 308
Score = 119 bits (298), Expect = 2e-24
Identities = 82/217 (37%), Positives = 129/217 (59%), Gaps = 13/217 (5%)
Frame = -2
Query: 906 SSSVSDGNRKKRPFKRNYAM-------DDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQ 748
SS SDG+ K RP +++ A +D SQ +R+ P S+ Q ++ LF++
Sbjct: 99 SSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSSDRKQPMSSN------QAEIMALFRR 152
Query: 747 IETSISQEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKG-QTLNEGSDSMSNYK 571
I++SIS+ ++ +T ++ +++S++ N +S+LE L+ S KG T+ EG+ ++ +
Sbjct: 153 IQSSISKGESTATKKKKASRSNE--NSPTNSILEVLRHSTKHAKGPSTVREGNKVLTQKR 210
Query: 570 TEKEPSLPEPEASA--FKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPL 397
+ + + E + K RPPS+F KK+ IPS ST + EL + E+ E + L
Sbjct: 211 SVSKDQKTQAEHALEDVKLTRPPSNFTKKSPIPSPSTSRENTTELNS-EASEGKASNHKL 269
Query: 396 EL---EKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
EL EKMKLT+LKELAK+RG+KGYSKLKK EL+ LL
Sbjct: 270 ELPRVEKMKLTELKELAKSRGIKGYSKLKKGELLELL 306
>ref|XP_004293969.1| PREDICTED: uncharacterized protein LOC101302333 [Fragaria vesca
subsp. vesca]
Length = 257
Score = 114 bits (284), Expect = 9e-23
Identities = 73/205 (35%), Positives = 122/205 (59%), Gaps = 4/205 (1%)
Frame = -2
Query: 891 DGNRKKRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQIETSISQEKARS 712
+GNR+ + +R+ R+++ DE + PRG K S+Q +++LF++I++SIS+E
Sbjct: 59 EGNRRGQSSRRSTG-SGRTAKNDEAKKPRGGRKSKSSNQEEIISLFRRIQSSISKEVESV 117
Query: 711 TNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKTEKEPSLPEPEAS 532
++ + +S++ S +S+L LQ GGS K + + + + T+++ P +
Sbjct: 118 DTKKIKSDASEEKPPSAESILRVLQ--GGSTKQREVKQDRRKVD---TQEQRIQANPSVT 172
Query: 531 AFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVE---SLERGVEDEPLE-LEKMKLTQLK 364
FK RPPS F+K++ IPSS+ E+ + S+ V + LE +E+MKL +LK
Sbjct: 173 DFKLTRPPSKFVKRSPIPSSAHMSRPPGEVLETKNGASVTTAVTELELERVEEMKLPELK 232
Query: 363 ELAKARGVKGYSKLKKSELVNLLST 289
ELAK+RG++GYSKLKK ELV LL +
Sbjct: 233 ELAKSRGMRGYSKLKKKELVELLKS 257
>ref|XP_006358113.1| PREDICTED: SAP-like protein BP-73-like [Solanum tuberosum]
Length = 255
Score = 113 bits (283), Expect = 1e-22
Identities = 79/202 (39%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Frame = -2
Query: 894 SDGNRKKRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNR--LLTLFKQIETSISQEK 721
+DG R+++ K A ++S+ E + S +S N+ +++LFK+I++SIS+
Sbjct: 59 ADGIRRRKSSKD--ATPGKTSKGSELNIQPSPDSKSPNSLNQEEIISLFKRIQSSISKGD 116
Query: 720 ARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKTEKEPSLPEP 541
+ S+ +R STKSS++ + DSVLE L+ S KG ++G +++ K +KEP P
Sbjct: 117 STSSKKR-STKSSEE-KPAIDSVLEILRHSKTEPKGTKDDKG---LTHQKDKKEPETDYP 171
Query: 540 EASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLELEKMKLTQLKE 361
+ ++ R SSF+K++ + S + + +EL SLE VE E +++E+MKL QLKE
Sbjct: 172 PTADPRSTRLRSSFVKRSPL-QSPFNSKEKVELKVETSLENHVESEAVKIEEMKLPQLKE 230
Query: 360 LAKARGVKGYSKLKKSELVNLL 295
LAK+RG+KGYSKLKKSEL+ LL
Sbjct: 231 LAKSRGLKGYSKLKKSELLELL 252
>gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theobroma cacao]
Length = 257
Score = 113 bits (282), Expect = 2e-22
Identities = 80/214 (37%), Positives = 132/214 (61%), Gaps = 10/214 (4%)
Frame = -2
Query: 906 SSSVSDGNRK-KRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQIETSIS 730
SS SDGNR+ RP R + R +++ ++ P G+ + S+Q ++ LF++I++SIS
Sbjct: 51 SSITSDGNRRGSRP--RKSSASGRKKEDESKKPPVGNEAPNSSNQEDIIALFRRIQSSIS 108
Query: 729 QEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKT---EKE 559
+ + S + S SSKD + + +SVL+ L+ES + +G N+G + S +K+ +K
Sbjct: 109 KGETGSAKAK-SLSSSKDKSTA-ESVLDVLRESRKNVRGIRSNKGGKA-SRWKSGVPKKI 165
Query: 558 PSLPEPEASA---FKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLEL- 391
+ + +A FK +RPPS+F+K++ +P + +K +E ++ E +E L+L
Sbjct: 166 EGMGKKANAATQDFKLLRPPSNFVKRSPVPYPTAPRVKGLE----QNNEVVATNEGLKLA 221
Query: 390 --EKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
EK+KLT+LK+LAKARG+KGYS+ KKSELV LL
Sbjct: 222 NIEKLKLTELKDLAKARGIKGYSRFKKSELVRLL 255
>gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theobroma cacao]
Length = 345
Score = 113 bits (282), Expect = 2e-22
Identities = 80/214 (37%), Positives = 132/214 (61%), Gaps = 10/214 (4%)
Frame = -2
Query: 906 SSSVSDGNRK-KRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQIETSIS 730
SS SDGNR+ RP R + R +++ ++ P G+ + S+Q ++ LF++I++SIS
Sbjct: 139 SSITSDGNRRGSRP--RKSSASGRKKEDESKKPPVGNEAPNSSNQEDIIALFRRIQSSIS 196
Query: 729 QEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKT---EKE 559
+ + S + S SSKD + + +SVL+ L+ES + +G N+G + S +K+ +K
Sbjct: 197 KGETGSAKAK-SLSSSKDKSTA-ESVLDVLRESRKNVRGIRSNKGGKA-SRWKSGVPKKI 253
Query: 558 PSLPEPEASA---FKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLEL- 391
+ + +A FK +RPPS+F+K++ +P + +K +E ++ E +E L+L
Sbjct: 254 EGMGKKANAATQDFKLLRPPSNFVKRSPVPYPTAPRVKGLE----QNNEVVATNEGLKLA 309
Query: 390 --EKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
EK+KLT+LK+LAKARG+KGYS+ KKSELV LL
Sbjct: 310 NIEKLKLTELKDLAKARGIKGYSRFKKSELVRLL 343
>gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis]
Length = 258
Score = 112 bits (279), Expect = 3e-22
Identities = 76/211 (36%), Positives = 124/211 (58%), Gaps = 9/211 (4%)
Frame = -2
Query: 894 SDGNRK-KRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQIETSISQEKA 718
SDG+R +RP +++ ++++E + P G ++Q ++ LF++I++SIS+EK
Sbjct: 54 SDGDRTGRRPPRKSTTSGRKTNREANKASPVGKKPNS-ANQEEIIALFRRIQSSISKEK- 111
Query: 717 RSTNERNSTKSSKDFNVSFDSVLEALQESGGSGK-----GQTLNEGSDSMSNYKTEKEPS 553
S N++ + + S +S+L+ L+ SG GK G+ ++ + E E S
Sbjct: 112 -SVNDKKINADASEEKSSVESILKVLRRSGKQGKAKIEEGKKISMRKRVVPKKDQELEGS 170
Query: 552 LPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLEL---EKM 382
P S + RPPS+F+K++ IPS + S+EL + +S E+E L L E+M
Sbjct: 171 TPAVTGSKL-SRRPPSNFVKRSPIPSPTIPRSISLELNSKQST--AAEEEGLHLPKVEEM 227
Query: 381 KLTQLKELAKARGVKGYSKLKKSELVNLLST 289
KL +LKELAK+RG+KGYS+LKKSEL++LL T
Sbjct: 228 KLAELKELAKSRGIKGYSRLKKSELLSLLRT 258
>ref|XP_004233069.1| PREDICTED: uncharacterized protein LOC101255261 [Solanum
lycopersicum]
Length = 255
Score = 109 bits (272), Expect = 2e-21
Identities = 78/202 (38%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Frame = -2
Query: 894 SDGNRKKRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNR--LLTLFKQIETSISQEK 721
+DG R+++ K A ++S+ E + S +S N+ +++LFK+I++SIS+
Sbjct: 59 ADGIRRRKSSKD--ATPGKTSKGSELNIQPSPDSKLPNSLNQEEIISLFKRIQSSISKGD 116
Query: 720 ARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKTEKEPSLPEP 541
+ S+ +R STKSS++ + DSVLE L+ S KG ++GS ++ + +KEP
Sbjct: 117 STSSKKR-STKSSEE-RPAIDSVLEILRHSKTEAKGTKDDKGS---THQEDQKEPETDYS 171
Query: 540 EASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLELEKMKLTQLKE 361
+ ++ R SSF+K++ + S + + ++L SLE VE E +++E+MKL QLKE
Sbjct: 172 PTADPRSTRLRSSFVKRSPL-QSPFNSKEKVKLKMETSLENHVESEAVKIEEMKLPQLKE 230
Query: 360 LAKARGVKGYSKLKKSELVNLL 295
LAK+RG+KGYSKLKKSELV LL
Sbjct: 231 LAKSRGLKGYSKLKKSELVELL 252
>ref|XP_002305062.1| hypothetical protein POPTR_0004s05800g [Populus trichocarpa]
gi|222848026|gb|EEE85573.1| hypothetical protein
POPTR_0004s05800g [Populus trichocarpa]
Length = 226
Score = 106 bits (264), Expect = 2e-20
Identities = 77/196 (39%), Positives = 111/196 (56%), Gaps = 9/196 (4%)
Frame = -2
Query: 855 YAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQIETSISQEKARSTNERNSTKSSKD 676
+A + Q +R+LP S+ Q ++ LF++I+ SIS+ ++ +T ++N+ +S K
Sbjct: 42 FASQNGVLQSSDRKLPLSSN------QEEIMALFRRIQYSISKGESTATEKKNAGRSEKS 95
Query: 675 FNVSFDSVLEALQESGGSGKG-QTLNEGSDSMSNYKTEKE--PSLPEPEA----SAFKAM 517
DS+LE L S K T+ EG N T K P + + +A + FK
Sbjct: 96 ---PTDSILEVLLRSRKQAKDTNTVTEGK----NVPTHKRSVPKVQKMQARNALADFKLT 148
Query: 516 RPPSSFMKKNTIPSSSTHGIKSIELT--AVESLERGVEDEPLELEKMKLTQLKELAKARG 343
RP S+F KK +IPS ST G K+ EL A E+ G E +E+MKLT+LKELAK+RG
Sbjct: 149 RPHSNFTKKFSIPSPSTPGEKNAELNSEASEAKASGSISELPRVEEMKLTELKELAKSRG 208
Query: 342 VKGYSKLKKSELVNLL 295
+KGYSKLKK EL+ L
Sbjct: 209 IKGYSKLKKGELLEFL 224
>gb|EMJ14672.1| hypothetical protein PRUPE_ppa023922mg, partial [Prunus persica]
Length = 160
Score = 100 bits (250), Expect = 8e-19
Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Frame = -2
Query: 783 SSQNRLLTLFKQIETSISQEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTL 604
S Q +++LF++I+TSIS +++ + + NS S + S +S+L+AL S KG+ L
Sbjct: 2 SDQEEIISLFRRIQTSISNKESVNAKKINSNVSED--SPSSESILQALYGSRKQ-KGKAL 58
Query: 603 NE-GSDSMSNYKTEKEPSLPE-PEASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVE 430
++ G + + K +E + E P + FK RPPS F+K++ IPS +SI V
Sbjct: 59 DKAGQEVWTRRKDTQEQQIQEDPSVAEFKLTRPPSKFVKRSPIPS------QSIPRGQVL 112
Query: 429 SLERGVEDEPL-ELEKMKLTQLKELAKARGVKGYSKLKKSELVNLLST 289
L G +E+MKL +LKELAK RG+KGYSKLKKSELV LL +
Sbjct: 113 ELNNGASSSAAGRIEEMKLPELKELAKTRGIKGYSKLKKSELVQLLKS 160
>ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [Amborella trichopoda]
gi|548837640|gb|ERM98325.1| hypothetical protein
AMTR_s00170p00016030 [Amborella trichopoda]
Length = 234
Score = 99.8 bits (247), Expect = 2e-18
Identities = 74/216 (34%), Positives = 121/216 (56%), Gaps = 10/216 (4%)
Frame = -2
Query: 903 SSVSDGNRKKRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQIETSISQE 724
SS+ NRK +P +RN D+ +D+ + G S SSQ ++ LF++I++SIS+
Sbjct: 24 SSLKSENRKGQPSRRNTGNDEVG--KDKEQSSDGDLSDS-SSQEEIIALFRRIQSSISKG 80
Query: 723 KARSTNERNSTKSSKDFNVSFDSVLEALQE--------SGGSGKGQTLNEGSDSMSNYKT 568
RSTN ++ T SK S DSVL AL++ SG+G+ + G ++
Sbjct: 81 SPRSTN-KSITDDSK-IKQSADSVLHALRQYPARKLNKEATSGQGKDVR-GRGALRRGSL 137
Query: 567 EKEPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLE-- 394
K+ EP+ FK RP S+F+K++ IPSS + ++ A+ S + V++
Sbjct: 138 NKDQKDEEPKTDHFKLSRPASNFVKRSPIPSSLPR--EKVDEKALASGAKTVDNALTSKT 195
Query: 393 LEKMKLTQLKELAKARGVKGYSKLKKSELVNLLSTQ 286
++ MKL +L++LA++ G+KGYSKLKK EL+ L+ +
Sbjct: 196 MDDMKLMELRKLARSHGMKGYSKLKKGELLALMKKE 231
>ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis]
gi|223538488|gb|EEF40093.1| conserved hypothetical
protein [Ricinus communis]
Length = 289
Score = 92.4 bits (228), Expect = 3e-16
Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 14/218 (6%)
Frame = -2
Query: 906 SSSVSDGNRKKR-------PFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNRLLTLFKQ 748
S++ SDG+R+ R P KR Q + +LPR ++ ++ LF++
Sbjct: 81 SNTKSDGSRRGRSPRKSSSPGKRKKEDKSEKYQFSDGKLPRSPE------KDEIIALFRR 134
Query: 747 IETSISQEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKT 568
I +SIS+ +A+ST ++ S+D + + +S+LEAL++S KG+ + SM
Sbjct: 135 IHSSISKGEAKST-QQTDINFSEDKSPT-ESILEALRQSRKPVKGR--EQDRVSMQKRGV 190
Query: 567 EKE-PSLP---EPEASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEP 400
KE P L + A+ F RPPS F++++ I S S EL S D+
Sbjct: 191 PKEGPKLQNNAQHMAAKFNFTRPPSKFIRRSPISSPSFPRGSPTELNNDPSASTE-SDKV 249
Query: 399 LEL---EKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
LEL E+MKL +LKELAK+RG+KGYSKLKK EL+ LL
Sbjct: 250 LELPQIEEMKLPELKELAKSRGIKGYSKLKKGELLELL 287
>emb|CAB37459.1| hypothetical protein [Arabidopsis thaliana]
gi|7268668|emb|CAB78876.1| hypothetical protein
[Arabidopsis thaliana]
Length = 251
Score = 89.4 bits (220), Expect = 2e-15
Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Frame = -2
Query: 807 RGSSSGKWSSQNRLLTLFKQIETSISQEKARSTNE-RNSTKSSKDFNVSFDSVLEALQES 631
R +S+ S+Q +++L K+I++SIS+ ++R E +NS +SSK+ ++ ++L+ L++S
Sbjct: 85 RRTSNPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLT-KAILDVLEKS 143
Query: 630 GGSGKGQTLNEGSDSMSNYKTEKEPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKS 451
+G L G S+ +++ LP RPPSSF+K+ + SS++
Sbjct: 144 RKKTEGNQLCFGDTSVKEKPPKRQVELP----------RPPSSFVKRTPLSSSASGPRGK 193
Query: 450 IELT----AVESLERGVEDEPLELEKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
+ ++ A+ L + E L +E MKL +LKE+AK RG+KGYSKL+KSEL+ L+
Sbjct: 194 LPVSNSDKALGKLTKKEEKASL-IETMKLAELKEVAKNRGIKGYSKLRKSELLELI 248
>ref|XP_006467623.1| PREDICTED: SAP-like protein BP-73-like [Citrus sinensis]
Length = 249
Score = 85.9 bits (211), Expect = 3e-14
Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Frame = -2
Query: 894 SDGNRKKRPFKRNYAMDDRSSQEDERRLPRGSSSGKWSSQNR---LLTLFKQIETSISQE 724
+DG+R RP YA R+ D + SS GK SS + +++LF +I++SIS+
Sbjct: 53 ADGSRGDRPPLNGYAAG-RTKNGDGNESSQ-SSDGKVSSSSNNEAIISLFGRIKSSISKR 110
Query: 723 KARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKTEKEPSLPE 544
+A T +RN + S K S VL LQ + + + SM + E++
Sbjct: 111 EAIRTKKRNPSSSDKPKVQSVPDVL--LQP-----RKEVKVTDTHSMKDVPKEEQKIQNN 163
Query: 543 PEASAFKAMRPPSSFMKKNTIPSSSTHGIKSI---ELTAVESLERGVEDEPLELEKMKLT 373
+ K R PS+F+K++ IPS S K + E +A + R +E +E++KL
Sbjct: 164 EPVTDTKLTRLPSNFVKRSPIPSPSAPRDKRVLNYEPSANKESTRQLELP--RVEELKLP 221
Query: 372 QLKELAKARGVKGYSKLKKSELVNLL 295
QLKELAKARG+KGYS++KKSEL+ L
Sbjct: 222 QLKELAKARGIKGYSRMKKSELIKKL 247
>ref|XP_006414064.1| hypothetical protein EUTSA_v10026132mg [Eutrema salsugineum]
gi|557115234|gb|ESQ55517.1| hypothetical protein
EUTSA_v10026132mg [Eutrema salsugineum]
Length = 235
Score = 85.1 bits (209), Expect = 5e-14
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Frame = -2
Query: 906 SSSVSDGNRKKRPFKRNYAMDDRSSQED----ERRLPRGSSSGKWSSQNRLLTLFKQIET 739
S +V +G+R+ P + + S++ ++R SSS S Q +++LF++I++
Sbjct: 39 SRTVFNGDRRSWPQEDASSSSSGRSKKGSVCCKKRSDERSSSPSKSKQEEIISLFRRIQS 98
Query: 738 SISQEKARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMSNYKTEKE 559
SIS+ ++ E+N SS+ +S ++L+ L++ +G T G S
Sbjct: 99 SISKGDSQGAEEKNRNGSSEREPLS-KAILDVLEKPRKKPEGDT---GVKS--------- 145
Query: 558 PSLPEPEASAFKAMRPPSSFMKKNTI-PSSS-THGIKSIELTAVESLERGVEDEPLELEK 385
EP RPPSS K++ + PS+S G I + E E++P +E
Sbjct: 146 ----EPPKRQGNVARPPSSVAKRSPVGPSTSGPRGKLPISKSDKALEETAKEEKPPLIET 201
Query: 384 MKLTQLKELAKARGVKGYSKLKKSELVNLL 295
MKL +LKE+AK RG+KGYSKLKKSE++ LL
Sbjct: 202 MKLAELKEVAKKRGIKGYSKLKKSEILELL 231
>ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana]
gi|332658683|gb|AEE84083.1| Rho termination factor
[Arabidopsis thaliana]
Length = 245
Score = 84.7 bits (208), Expect = 6e-14
Identities = 60/176 (34%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = -2
Query: 807 RGSSSGKWSSQNRLLTLFKQIETSISQEKARSTNE-RNSTKSSKDFNVSFDSVLEALQES 631
R +S+ S+Q +++L K+I++SIS+ ++R E +NS +SSK+ ++ ++L+ L++S
Sbjct: 85 RRTSNPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLT-KAILDVLEKS 143
Query: 630 GGSGKGQTLNEGSDSMSNYKTEKEPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKS 451
+ EG S+ +++ LP RPPSSF+K+ + SS++
Sbjct: 144 ------RKKTEGDTSVKEKPPKRQVELP----------RPPSSFVKRTPLSSSASGPRGK 187
Query: 450 IELT----AVESLERGVEDEPLELEKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
+ ++ A+ L + E L +E MKL +LKE+AK RG+KGYSKL+KSEL+ L+
Sbjct: 188 LPVSNSDKALGKLTKKEEKASL-IETMKLAELKEVAKNRGIKGYSKLRKSELLELI 242
>ref|XP_006449534.1| hypothetical protein CICLE_v10016384mg [Citrus clementina]
gi|557552145|gb|ESR62774.1| hypothetical protein
CICLE_v10016384mg [Citrus clementina]
Length = 249
Score = 81.3 bits (199), Expect = 7e-13
Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 4/232 (1%)
Frame = -2
Query: 978 LREHLHWPXXXXXXXXXXXXXXHKSSSVSDGNRKKRPFKRNYAMDDRSSQEDERRLPRGS 799
LRE +WP S +DG+R R YA R+ D + S
Sbjct: 27 LREIAYWPSPFGIQKNPCKFTYL--SIRADGSRGNRTPLNGYAAG-RTKNGDGNESSQ-S 82
Query: 798 SSGKWSSQNR---LLTLFKQIETSISQEKARSTNERNSTKSSKDFNVSFDSVLEALQESG 628
S GK SS + +++L +I++SIS+ +A T +RN + S K S VL ++
Sbjct: 83 SDGKVSSSSNNEAIISLVGRIKSSISKREAVRTKKRNPSSSDKPKVQSVSDVLFQPRK-- 140
Query: 627 GSGKGQTLNEGSDSMSNYKTEKEPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKSI 448
+ + S+ + E++ + K R PS+F+K++ IPS S K +
Sbjct: 141 -----EVKVIDTRSIKDVPKEEQKIQDNEPVADIKLSRLPSNFVKRSPIPSPSAPRDKRV 195
Query: 447 -ELTAVESLERGVEDEPLELEKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
S E E +E++KL QLKELAKARG+KGYS++KKSEL+N L
Sbjct: 196 LNYEPSASKESTKHLELPRVEELKLPQLKELAKARGIKGYSRMKKSELINKL 247
>dbj|BAF76883.1| H2B histone-fold-like protein [Nicotiana tabacum]
Length = 216
Score = 72.8 bits (177), Expect = 2e-10
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Frame = -2
Query: 894 SDGNRKKRPFKRNYAMDDRSSQEDERRLPRG--SSSGKWSSQNRLLTLFKQIETSISQEK 721
++G+R+++ K A ++S+ DE + S S +Q +++LFK+I++SIS+
Sbjct: 43 AEGSRRRKSSKD--ATPGKTSKGDEIDIQSSPDSKSSNSLNQEEIISLFKRIQSSISKGD 100
Query: 720 ARSTNERNSTKSSKDFNVSFDSVLEALQESGGSGKGQTLNEGSDSMS-------NYKTEK 562
+ S+ +R STKSS++ + DSVLE L+ S KG T N D S +KT+
Sbjct: 101 SLSSKKR-STKSSEE-KPTIDSVLEILRHSKTESKGTTSNTKGDKGSTHQRGQKEHKTDY 158
Query: 561 EPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKSIELTAVESLERGVEDEPLELEKM 382
P+L ++ RPPSSF+K++ + SS + + +EL S E E +++E M
Sbjct: 159 SPTLDP------RSTRPPSSFVKRSPL-QSSFNSKEKVELKTETSPGNHGETEAIKIEDM 211
Query: 381 KLTQ 370
KL Q
Sbjct: 212 KLPQ 215
>ref|XP_002867979.1| hypothetical protein ARALYDRAFT_492985 [Arabidopsis lyrata subsp.
lyrata] gi|297313815|gb|EFH44238.1| hypothetical protein
ARALYDRAFT_492985 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 71.6 bits (174), Expect = 5e-10
Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Frame = -2
Query: 801 SSSGKWSSQNRLLTLFKQIETSISQEKARSTNER-NSTKSSKDFNVSFDSVLEALQESGG 625
+S+ S+Q +++L ++I++SIS+ ++R E+ NS +SSK+ ++ ++L+ L++S
Sbjct: 82 TSNPSKSNQEEIISLLRRIQSSISKGESRGIEEKKNSDESSKEKPLT-KAILDVLEKSRK 140
Query: 624 SGKGQTLNEGSDSMSNYKTEKEPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKSIE 445
+G + +K+P E S +PPS+F KK IPS+S K
Sbjct: 141 KTEG-----------DISVKKKPPKGPVEVS-----QPPSNFAKKTPIPSASGPRGKLPL 184
Query: 444 LTAVESL-ERGVEDEPLEL-EKMKLTQLKELAKARGVKGYSKL 322
+ ++L E V++E L E MKL +LKE+AK RG+KGYSKL
Sbjct: 185 SNSNKALGEMNVKEEKASLMETMKLAELKEVAKNRGIKGYSKL 227
>ref|NP_974569.1| Rho termination factor [Arabidopsis thaliana]
gi|117168215|gb|ABK32190.1| At4g18740 [Arabidopsis
thaliana] gi|222423572|dbj|BAH19755.1| AT4G18740
[Arabidopsis thaliana] gi|332658684|gb|AEE84084.1| Rho
termination factor [Arabidopsis thaliana]
Length = 214
Score = 69.3 bits (168), Expect = 3e-09
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Frame = -2
Query: 807 RGSSSGKWSSQNRLLTLFKQIETSISQEKARSTNE-RNSTKSSKDFNVSFDSVLEALQES 631
R +S+ S+Q +++L K+I++SIS+ ++R E +NS +SSK+ ++ ++L+ L++S
Sbjct: 85 RRTSNPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLT-KAILDVLEKS 143
Query: 630 GGSGKGQTLNEGSDSMSNYKTEKEPSLPEPEASAFKAMRPPSSFMKKNTIPSSSTHGIKS 451
+ EG S+ +++ LP RPPSSF+K+ + SSS G +
Sbjct: 144 ------RKKTEGDTSVKEKPPKRQVELP----------RPPSSFVKRTPL-SSSASGPR- 185
Query: 450 IELTAVESLERGVEDEPLELEKMKLTQLKELAKARGVKGYSKLKKSELVNLL 295
+LKE+AK RG+KGYSKL+KSEL+ L+
Sbjct: 186 --------------------------ELKEVAKNRGIKGYSKLRKSELLELI 211