BLASTX nr result
ID: Rheum21_contig00024950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024950
(664 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus pe... 92 1e-16
ref|XP_004290033.1| PREDICTED: F-box protein SKIP23-like [Fragar... 83 6e-14
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 78 2e-12
ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Popu... 78 2e-12
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 76 8e-12
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 76 8e-12
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm... 76 8e-12
gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobro... 75 2e-11
gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobro... 75 2e-11
gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobro... 75 2e-11
ref|XP_002305539.2| hypothetical protein POPTR_0004s18630g [Popu... 73 9e-11
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif... 70 4e-10
gb|EXB95361.1| F-box protein SKIP23 [Morus notabilis] 69 1e-09
ref|XP_006422483.1| hypothetical protein CICLE_v10028612mg [Citr... 69 1e-09
ref|XP_006364536.1| PREDICTED: F-box protein SKIP23-like [Solanu... 67 5e-09
ref|XP_004231072.1| PREDICTED: F-box protein SKIP23-like [Solanu... 67 5e-09
ref|XP_006486651.1| PREDICTED: F-box protein SKIP23-like isoform... 65 1e-08
ref|XP_006486650.1| PREDICTED: F-box protein SKIP23-like isoform... 65 1e-08
ref|XP_003599163.1| F-box protein [Medicago truncatula] gi|35548... 63 9e-08
gb|ACJ85062.1| unknown [Medicago truncatula] gi|388504026|gb|AFK... 63 9e-08
>gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus persica]
Length = 406
Score = 92.4 bits (228), Expect = 1e-16
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
KSLGD VLFLGD+C FSA ASELSGCKGNCI F F + S ++G + DIGVF
Sbjct: 310 KSLGDRVLFLGDDCTFSASASELSGCKGNCIFFT---DNFFYTSGEDEG-VFKGRDIGVF 365
Query: 183 SLEDGKIEPFETYPSYSKLF 242
L+DG I P YP YSKLF
Sbjct: 366 DLDDGSIAPLSDYPEYSKLF 385
>ref|XP_004290033.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
Length = 397
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/80 (56%), Positives = 52/80 (65%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
KSLGD VLFLGD+C FSA ASEL+GCKGNCI F F + S E+G + DIGVF
Sbjct: 299 KSLGDRVLFLGDDCTFSASASELAGCKGNCIFF---MDNFFYTSGEEEG-TYKGRDIGVF 354
Query: 183 SLEDGKIEPFETYPSYSKLF 242
L+ G I P YP +KLF
Sbjct: 355 DLDRGAITPLSDYPEAAKLF 374
>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
vinifera]
Length = 387
Score = 78.2 bits (191), Expect = 2e-12
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
+SLGD +LFLGD+ +FSA AS+ GCKGN ICF F S+ E+ DA R IGVF
Sbjct: 298 ESLGDRLLFLGDDSSFSARASDFYGCKGNSICFT----NISFFSDAEEDDASRSGTIGVF 353
Query: 183 SLEDGKIEPFETYPSYSK 236
L+ G I P +Y +YSK
Sbjct: 354 DLDSGSIGPLSSYANYSK 371
>ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Populus trichocarpa]
gi|222850098|gb|EEE87645.1| hypothetical protein
POPTR_0009s14200g [Populus trichocarpa]
Length = 410
Score = 78.2 bits (191), Expect = 2e-12
Identities = 42/80 (52%), Positives = 49/80 (61%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
K+L D VLFLGD+ FSA ASELSGCKGNCI F E F + ++ DIGVF
Sbjct: 307 KNLEDRVLFLGDDSTFSASASELSGCKGNCIFF---EDNFFYSREEGDDGSMIGRDIGVF 363
Query: 183 SLEDGKIEPFETYPSYSKLF 242
LE G I P +P YSK+F
Sbjct: 364 ELESGCIGPLRNFPDYSKMF 383
>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 458
Score = 76.3 bits (186), Expect = 8e-12
Identities = 40/78 (51%), Positives = 51/78 (65%)
Frame = +3
Query: 9 LGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFSL 188
LG+ +LFLG+NC+FSA AS +SGCKGNCI F G F P N ++ D + +DI +F L
Sbjct: 303 LGNTMLFLGENCSFSASASGVSGCKGNCIFFTDG---FLCP-NVDEDDVFKGSDIAIFDL 358
Query: 189 EDGKIEPFETYPSYSKLF 242
E G I P P YS+LF
Sbjct: 359 EFGTISPLSDSPMYSRLF 376
>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 404
Score = 76.3 bits (186), Expect = 8e-12
Identities = 40/78 (51%), Positives = 51/78 (65%)
Frame = +3
Query: 9 LGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFSL 188
LG+ +LFLG+NC+FSA AS +SGCKGNCI F G F P N ++ D + +DI +F L
Sbjct: 303 LGNTMLFLGENCSFSASASGVSGCKGNCIFFTDG---FLCP-NVDEDDVFKGSDIAIFDL 358
Query: 189 EDGKIEPFETYPSYSKLF 242
E G I P P YS+LF
Sbjct: 359 EFGTISPLSDSPMYSRLF 376
>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
gi|223532164|gb|EEF33970.1| conserved hypothetical
protein [Ricinus communis]
Length = 339
Score = 76.3 bits (186), Expect = 8e-12
Identities = 44/83 (53%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICF--NLGEYRFQ-FPSNPEQGDALRCADI 173
KSLGD VLFLGD+ FSA S+LSGCKGNCI F N R + +N L DI
Sbjct: 246 KSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDNFFYSRDENLRANGGDDGVLAGRDI 305
Query: 174 GVFSLEDGKIEPFETYPSYSKLF 242
GVF LE G I P YP Y+K+F
Sbjct: 306 GVFDLETGCIGPLGNYPEYAKMF 328
>gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobroma cacao]
Length = 407
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/80 (50%), Positives = 50/80 (62%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
K+L D VLFLGD+ FSA A +LS C+GNCI F F + E G + RC D+GVF
Sbjct: 314 KNLDDRVLFLGDDFTFSASAKDLSVCRGNCIIF---ADNFFYSLGAEDGQSERC-DVGVF 369
Query: 183 SLEDGKIEPFETYPSYSKLF 242
LE+G I P +P +SKLF
Sbjct: 370 DLENGSIGPLGKFPQFSKLF 389
>gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobroma cacao]
Length = 406
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/80 (50%), Positives = 50/80 (62%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
K+L D VLFLGD+ FSA A +LS C+GNCI F F + E G + RC D+GVF
Sbjct: 314 KNLDDRVLFLGDDFTFSASAKDLSVCRGNCIIF---ADNFFYSLGAEDGQSERC-DVGVF 369
Query: 183 SLEDGKIEPFETYPSYSKLF 242
LE+G I P +P +SKLF
Sbjct: 370 DLENGSIGPLGKFPQFSKLF 389
>gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobroma cacao]
Length = 411
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/80 (50%), Positives = 50/80 (62%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
K+L D VLFLGD+ FSA A +LS C+GNCI F F + E G + RC D+GVF
Sbjct: 314 KNLDDRVLFLGDDFTFSASAKDLSVCRGNCIIF---ADNFFYSLGAEDGQSERC-DVGVF 369
Query: 183 SLEDGKIEPFETYPSYSKLF 242
LE+G I P +P +SKLF
Sbjct: 370 DLENGSIGPLGKFPQFSKLF 389
>ref|XP_002305539.2| hypothetical protein POPTR_0004s18630g [Populus trichocarpa]
gi|566167272|ref|XP_006384594.1| hypothetical protein
POPTR_0004s18630g [Populus trichocarpa]
gi|550341338|gb|EEE86050.2| hypothetical protein
POPTR_0004s18630g [Populus trichocarpa]
gi|550341339|gb|ERP62391.1| hypothetical protein
POPTR_0004s18630g [Populus trichocarpa]
Length = 410
Score = 72.8 bits (177), Expect = 9e-11
Identities = 41/78 (52%), Positives = 46/78 (58%)
Frame = +3
Query: 9 LGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFSL 188
L D VLFLGD+ FSA ASELSGCKGNCI FN F + +L DIGVF L
Sbjct: 309 LEDRVLFLGDDLTFSASASELSGCKGNCIFFN---DDFFYSRGEGDDGSLFGRDIGVFEL 365
Query: 189 EDGKIEPFETYPSYSKLF 242
E G I P +P SK+F
Sbjct: 366 ESGCIGPLRNFPDNSKMF 383
>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
Length = 375
Score = 70.5 bits (171), Expect = 4e-10
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
++LGD +LFLG+ FSA ASE GC+GNCI + F FP N ++ DA IG+F
Sbjct: 287 ENLGDRILFLGEKSTFSAVASEFCGCEGNCIYYT---NSFFFP-NDQEDDAY--TGIGIF 340
Query: 183 SLEDGKIEPFETYPSYSKL 239
+LE+G + P ++P+YSK+
Sbjct: 341 NLENGNLGPLSSFPNYSKV 359
>gb|EXB95361.1| F-box protein SKIP23 [Morus notabilis]
Length = 417
Score = 69.3 bits (168), Expect = 1e-09
Identities = 39/80 (48%), Positives = 48/80 (60%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVF 182
KSL D +LFLGD+C FSA AS+LS C+ NCI F F S E+ + DIGV+
Sbjct: 309 KSLDDRMLFLGDDCTFSASASDLSCCR-NCIFFTDN----FFYSGGEEDGVFKGRDIGVY 363
Query: 183 SLEDGKIEPFETYPSYSKLF 242
+E+G I YP YSKLF
Sbjct: 364 DMENGSIAALTDYPEYSKLF 383
>ref|XP_006422483.1| hypothetical protein CICLE_v10028612mg [Citrus clementina]
gi|557524417|gb|ESR35723.1| hypothetical protein
CICLE_v10028612mg [Citrus clementina]
Length = 394
Score = 68.9 bits (167), Expect = 1e-09
Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCA-DIGV 179
K+L DHVLFLG++C FS A +L KGNCI F + +GD C +GV
Sbjct: 305 KNLRDHVLFLGEDCVFSTSADDLGVSKGNCILFVDNLFYLS-----GEGDGSDCGHGVGV 359
Query: 180 FSLEDGKIEPFETYPSYSKLF 242
F LE G I+P E YP SKLF
Sbjct: 360 FDLESGCIKPLENYPELSKLF 380
>ref|XP_006364536.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 456
Score = 67.0 bits (162), Expect = 5e-09
Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +3
Query: 9 LGDHVLFLGDNCAFSACASEL-SGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFS 185
L D +LF+GDNC FSA SEL SGCKGNCI F+ ++ F S + G + IGVFS
Sbjct: 313 LEDRMLFVGDNCTFSALVSELDSGCKGNCILFS-DQF---FCSTEDDGGFWKHHGIGVFS 368
Query: 186 LEDGKIEPFETYPSYSKLF 242
LE+G+I P Y++LF
Sbjct: 369 LENGRICPINCCRGYAELF 387
>ref|XP_004231072.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
Length = 406
Score = 67.0 bits (162), Expect = 5e-09
Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 9 LGDHVLFLGDNCAFSACASEL-SGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFS 185
L D +LF+GDNC FSA SEL SGCKGNCI F+ F S + G + IGVFS
Sbjct: 310 LEDRMLFVGDNCTFSALVSELDSGCKGNCILFS----DLFFCSTEDDGGFWKHHGIGVFS 365
Query: 186 LEDGKIEPFETYPSYSKLF 242
LE+G I P Y++LF
Sbjct: 366 LENGSICPINCCRGYAELF 384
>ref|XP_006486651.1| PREDICTED: F-box protein SKIP23-like isoform X2 [Citrus sinensis]
Length = 394
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCA-DIGV 179
K+L DHVLFLG++C FS A +L KGNCI F + +GD C +GV
Sbjct: 305 KNLRDHVLFLGEDCVFSTSADDLGVSKGNCILFVDNLFYLS-----GEGDGSDCGHGVGV 359
Query: 180 FSLEDGKIEPFETYPSYSKLF 242
F LE G I+P E P SKLF
Sbjct: 360 FDLESGCIKPLENCPELSKLF 380
>ref|XP_006486650.1| PREDICTED: F-box protein SKIP23-like isoform X1 [Citrus sinensis]
Length = 416
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KSLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCA-DIGV 179
K+L DHVLFLG++C FS A +L KGNCI F + +GD C +GV
Sbjct: 305 KNLRDHVLFLGEDCVFSTSADDLGVSKGNCILFVDNLFYLS-----GEGDGSDCGHGVGV 359
Query: 180 FSLEDGKIEPFETYPSYSKLF 242
F LE G I+P E P SKLF
Sbjct: 360 FDLESGCIKPLENCPELSKLF 380
>ref|XP_003599163.1| F-box protein [Medicago truncatula] gi|355488211|gb|AES69414.1|
F-box protein [Medicago truncatula]
Length = 401
Score = 62.8 bits (151), Expect = 9e-08
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 6 SLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFS 185
+LGD VLFLG+ C+FSA ASEL GNC+ ++ Y F G +R + VF
Sbjct: 286 NLGDKVLFLGNGCSFSASASELGFANGNCVIYST-SYSF-------HGLNIRKCKMSVFH 337
Query: 186 LEDGKIEPFETYPSYSKLF 242
L+ G+ P YP Y KLF
Sbjct: 338 LDQGQASPLSDYPEYFKLF 356
>gb|ACJ85062.1| unknown [Medicago truncatula] gi|388504026|gb|AFK40079.1| unknown
[Medicago truncatula]
Length = 368
Score = 62.8 bits (151), Expect = 9e-08
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 6 SLGDHVLFLGDNCAFSACASELSGCKGNCICFNLGEYRFQFPSNPEQGDALRCADIGVFS 185
+LGD VLFLG+ C+FSA ASEL GNC+ ++ Y F G +R + VF
Sbjct: 286 NLGDKVLFLGNGCSFSASASELGFANGNCVIYST-SYSF-------HGLNIRKCKMSVFH 337
Query: 186 LEDGKIEPFETYPSYSKLF 242
L+ G+ P YP Y KLF
Sbjct: 338 LDQGQASPLSDYPEYFKLF 356