BLASTX nr result

ID: Rheum21_contig00024877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024877
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523267.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_006348280.1| PREDICTED: uncharacterized protein LOC102599...    57   2e-06
ref|XP_004244254.1| PREDICTED: uncharacterized protein LOC101262...    56   4e-06
ref|XP_002298895.2| hypothetical protein POPTR_0001s38180g [Popu...    56   6e-06

>ref|XP_002523267.1| conserved hypothetical protein [Ricinus communis]
           gi|223537480|gb|EEF39106.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
 Frame = +3

Query: 63  DYRNQEAAKLLEDGWFFGNLLKRKPKIVRCNSDPSASSNKA-----EICVHKKSAS--QT 221
           D + +    LLE+GWFFG LL  KP+++RC SDPS + ++       I + K S+S  + 
Sbjct: 20  DEKLENVHDLLEEGWFFGELLTSKPRMLRCYSDPSPNFDQGLLAENPIYIQKSSSSSKKV 79

Query: 222 ASSFLRAPSLPPNFGKGGKNFDDDE 296
           + + +RAPSLPP      +  ++ E
Sbjct: 80  SGTLIRAPSLPPRLESREETLEEKE 104


>ref|XP_006348280.1| PREDICTED: uncharacterized protein LOC102599815 [Solanum tuberosum]
          Length = 387

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = +3

Query: 78  EAAKLLEDGWFFGNLLKRKPKIVRCNSDPSASSNKAEICVHKKSASQTASSFLRAP 245
           E   LLE+ WFFGNLL RK +++RC SDP +SS K +  +  KS  +T SS  + P
Sbjct: 19  EPGMLLEESWFFGNLLDRKSRMLRCYSDPCSSSKKTQDFLSGKSMEETFSSLQKLP 74


>ref|XP_004244254.1| PREDICTED: uncharacterized protein LOC101262637 [Solanum
           lycopersicum]
          Length = 393

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = +3

Query: 78  EAAKLLEDGWFFGNLLKRKPKIVRCNSDPSASSNKAEICVHKKSASQTASSFLRAPSL 251
           E   LLE+ WFFGNLL RK +++RC S+P +SS K +  +  KS  +T SS  + P +
Sbjct: 20  EPGMLLEESWFFGNLLDRKSRMLRCYSEPCSSSKKTQDFLSGKSMEETFSSLQKLPQV 77


>ref|XP_002298895.2| hypothetical protein POPTR_0001s38180g [Populus trichocarpa]
           gi|550349157|gb|EEE83700.2| hypothetical protein
           POPTR_0001s38180g [Populus trichocarpa]
          Length = 353

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
 Frame = +3

Query: 87  KLLEDGWFFGNLL--KRKPKIVRCNSDPSASSNK---AEICVHKKSASQTAS-----SFL 236
           +LLE GWFFG LL    KP+++RC SDPS S ++   A  C     +S T       +  
Sbjct: 32  QLLEAGWFFGKLLDVNSKPRMLRCYSDPSPSFDQQILANNCPPSGKSSSTRELLPPGNLT 91

Query: 237 RAPSLPPNFGKGGKNFDDDE 296
           RAPSLPPN G+  +   + E
Sbjct: 92  RAPSLPPNIGRSEEKIQETE 111


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