BLASTX nr result
ID: Rheum21_contig00024857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024857
(508 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298885.1| PREDICTED: high mobility group B protein 13-... 80 4e-13
ref|XP_006343879.1| PREDICTED: high mobility group B protein 6-l... 79 6e-13
ref|XP_004245534.1| PREDICTED: high mobility group B protein 13-... 79 6e-13
gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabid... 79 8e-13
ref|XP_006286058.1| hypothetical protein CARUB_v10007590mg [Caps... 78 1e-12
ref|XP_002303636.1| high mobility group family protein [Populus ... 78 1e-12
ref|XP_006833508.1| hypothetical protein AMTR_s00093p00057150 [A... 77 2e-12
ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arab... 76 4e-12
ref|XP_006476407.1| PREDICTED: high mobility group B protein 6-l... 76 5e-12
ref|XP_006439386.1| hypothetical protein CICLE_v10023918mg [Citr... 76 5e-12
gb|EMJ11132.1| hypothetical protein PRUPE_ppa004611mg [Prunus pe... 75 1e-11
ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit... 74 2e-11
ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-... 74 2e-11
dbj|BAA32827.1| 98b [Daucus carota] 74 2e-11
gb|EPS57873.1| hypothetical protein M569_16944, partial [Genlise... 74 2e-11
ref|XP_004951279.1| PREDICTED: high mobility group B protein 6-l... 74 2e-11
ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [S... 74 3e-11
ref|NP_001190816.1| HMG (high mobility group) box protein [Arabi... 73 3e-11
ref|XP_002509934.1| transcription factor, putative [Ricinus comm... 73 3e-11
ref|NP_194111.1| HMG (high mobility group) box protein [Arabidop... 73 3e-11
>ref|XP_004298885.1| PREDICTED: high mobility group B protein 13-like [Fragaria vesca
subsp. vesca]
Length = 497
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = +3
Query: 3 EKTENIIXXXXXXXXXXXXXXXXXXXXXXXRPLSSYFMFSKEVRKSLLEERPDINNSTVT 182
EKTENII RP SSY +FSKE RK+L+EERP I+NST+T
Sbjct: 392 EKTENIIKKTKEIEKKKKEEKKIVDPNKPKRPASSYILFSKEARKNLMEERPGISNSTIT 451
Query: 183 ALLSVKWKELGDEEKQIW 236
L+SVKWKEL +E++++W
Sbjct: 452 VLISVKWKELSEEDRKVW 469
>ref|XP_006343879.1| PREDICTED: high mobility group B protein 6-like [Solanum tuberosum]
Length = 500
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/78 (48%), Positives = 48/78 (61%)
Frame = +3
Query: 3 EKTENIIXXXXXXXXXXXXXXXXXXXXXXXRPLSSYFMFSKEVRKSLLEERPDINNSTVT 182
EKTEN+I +P SS+F FS+E RK L+EERP INNST+
Sbjct: 393 EKTENLIKKTKENRQKKKQKDDNVDPNKPKKPASSFFRFSREERKKLVEERPGINNSTIN 452
Query: 183 ALLSVKWKELGDEEKQIW 236
AL+S+KWKEL +EEKQ+W
Sbjct: 453 ALISLKWKELSEEEKQVW 470
>ref|XP_004245534.1| PREDICTED: high mobility group B protein 13-like [Solanum
lycopersicum]
Length = 499
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/78 (48%), Positives = 48/78 (61%)
Frame = +3
Query: 3 EKTENIIXXXXXXXXXXXXXXXXXXXXXXXRPLSSYFMFSKEVRKSLLEERPDINNSTVT 182
EKTEN+I +P SS+F FS+E RK L+EERP INNST+
Sbjct: 392 EKTENLIKKTKENRQKKKQKDDNVYPNKPKKPASSFFRFSREERKKLVEERPGINNSTIN 451
Query: 183 ALLSVKWKELGDEEKQIW 236
AL+S+KWKEL +EEKQ+W
Sbjct: 452 ALISLKWKELSEEEKQVW 469
>gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSYF+FSK+ RK L+EERP NNSTVTAL+SVKWKELG+EEKQ++
Sbjct: 381 KPASSYFLFSKDERKRLIEERPGTNNSTVTALISVKWKELGEEEKQVY 428
>ref|XP_006286058.1| hypothetical protein CARUB_v10007590mg [Capsella rubella]
gi|482554763|gb|EOA18956.1| hypothetical protein
CARUB_v10007590mg [Capsella rubella]
Length = 460
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSYF+FSK+ RK L EERP NNSTVTAL+SVKWKELG+EEKQ++
Sbjct: 385 KPASSYFLFSKDERKKLAEERPGTNNSTVTALISVKWKELGEEEKQVY 432
>ref|XP_002303636.1| high mobility group family protein [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family
protein [Populus trichocarpa]
Length = 480
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SS+ +FSKE RKSL++ERP INNST+TA++SVKWKEL +EE+QIW
Sbjct: 400 KPASSFLLFSKETRKSLMDERPGINNSTLTAMISVKWKELNEEERQIW 447
>ref|XP_006833508.1| hypothetical protein AMTR_s00093p00057150 [Amborella trichopoda]
gi|548838235|gb|ERM98786.1| hypothetical protein
AMTR_s00093p00057150 [Amborella trichopoda]
Length = 469
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +3
Query: 3 EKTENIIXXXXXXXXXXXXXXXXXXXXXXXRPLSSYFMFSKEVRKSLLEERPDINNSTVT 182
EK++NII +P +S+F+F+KE RK LL++RP INNST+
Sbjct: 361 EKSDNIIKRAKKSSKKKQQKELVPDSNKPKKPATSFFLFNKETRKLLLQDRPGINNSTLN 420
Query: 183 ALLSVKWKELGDEEKQIW 236
AL+SVKWKEL DEE+QIW
Sbjct: 421 ALISVKWKELNDEERQIW 438
>ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata] gi|297320510|gb|EFH50932.1| hypothetical protein
ARALYDRAFT_489947 [Arabidopsis lyrata subsp. lyrata]
Length = 448
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSYF+F KE RKS+LEE P INNSTVTA +S+KWKELG+EEKQ++
Sbjct: 376 KPASSYFLFCKEARKSVLEEHPGINNSTVTAHISLKWKELGEEEKQVY 423
>ref|XP_006476407.1| PREDICTED: high mobility group B protein 6-like [Citrus sinensis]
Length = 487
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SS+ +FSKE RK LLEERP NNST+ AL+SVKWKELG+EEKQ W
Sbjct: 416 KPASSFLLFSKEARKILLEERPGTNNSTINALISVKWKELGEEEKQDW 463
>ref|XP_006439386.1| hypothetical protein CICLE_v10023918mg [Citrus clementina]
gi|557541648|gb|ESR52626.1| hypothetical protein
CICLE_v10023918mg [Citrus clementina]
Length = 468
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SS+ +FSKE RK LLEERP NNST+ AL+SVKWKELG+EEKQ W
Sbjct: 397 KPASSFLLFSKEARKILLEERPGTNNSTINALISVKWKELGEEEKQDW 444
>gb|EMJ11132.1| hypothetical protein PRUPE_ppa004611mg [Prunus persica]
Length = 500
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSY +FSKE RKSLLEERP N+ST+TAL+SVKWKEL +EE++ W
Sbjct: 421 KPASSYILFSKEARKSLLEERPGTNSSTITALISVKWKELSEEERKPW 468
>ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
13-like [Cucumis sativus]
Length = 500
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/48 (64%), Positives = 42/48 (87%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSY +FSKE RKS++EE+P ++NSTV AL+SVKWKEL +EE++IW
Sbjct: 418 KPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIW 465
>ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus]
Length = 500
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/48 (64%), Positives = 42/48 (87%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSY +FSKE RKS++EE+P ++NSTV AL+SVKWKEL +EE++IW
Sbjct: 418 KPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIW 465
>dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
RP SS+ +FSKE RK++ EERP INNST+ AL+SVKWKE+ EEKQ+W
Sbjct: 420 RPASSFLLFSKEARKTISEERPGINNSTLNALISVKWKEISHEEKQLW 467
>gb|EPS57873.1| hypothetical protein M569_16944, partial [Genlisea aurea]
Length = 463
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 3 EKTENIIXXXXXXXXXXXXXXXXXXXXXXXRPLSSYFMFSKEVRKSLLEERPDINNSTVT 182
EKTEN+I +P +S+ +FSKE RK L EERP+IN++T++
Sbjct: 365 EKTENLIKKNKEEKRQQKNNKKSSDPNKPKKPATSFLLFSKETRKCLQEERPEINSATLS 424
Query: 183 ALLSVKWKELGDEEKQIW 236
AL+SVKWKE+G++E++IW
Sbjct: 425 ALISVKWKEMGEDERKIW 442
>ref|XP_004951279.1| PREDICTED: high mobility group B protein 6-like [Setaria italica]
Length = 488
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SS+ +FSKE RK LLEERP INNST+ AL+SVKWKEL EE+Q W
Sbjct: 415 KPASSFLLFSKEARKQLLEERPGINNSTLNALISVKWKELSGEERQAW 462
>ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein
SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
RP SS+ +FSKE RK LLEERP INNS++ AL+SVKWKEL EE+Q W
Sbjct: 415 RPASSFLLFSKEARKQLLEERPGINNSSLNALISVKWKELSGEERQAW 462
>ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group)
box protein [Arabidopsis thaliana]
Length = 450
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSYF+FSK+ RK L EERP NN+TVTAL+S+KWKEL +EEKQ++
Sbjct: 375 KPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVY 422
>ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor,
putative [Ricinus communis]
Length = 514
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SS+ +FSKE RK+L +ERP INNST+ AL+SVKWKEL +EE+QIW
Sbjct: 438 KPASSFLIFSKEARKNLAQERPVINNSTLNALISVKWKELSEEERQIW 485
>ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High
mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis
thaliana] gi|7269229|emb|CAB81298.1| 98b like protein
[Arabidopsis thaliana] gi|18377799|gb|AAL67049.1|
putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein
[Arabidopsis thaliana] gi|22022506|gb|AAM83212.1|
putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group)
box protein [Arabidopsis thaliana]
Length = 456
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +3
Query: 93 RPLSSYFMFSKEVRKSLLEERPDINNSTVTALLSVKWKELGDEEKQIW 236
+P SSYF+FSK+ RK L EERP NN+TVTAL+S+KWKEL +EEKQ++
Sbjct: 381 KPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEKQVY 428