BLASTX nr result

ID: Rheum21_contig00024663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024663
         (737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-l...    72   1e-10
emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera]    70   7e-10
gb|EMJ26877.1| hypothetical protein PRUPE_ppa002827mg [Prunus pe...    67   6e-09
ref|XP_004508181.1| PREDICTED: WD repeat-containing protein 43-l...    67   8e-09
ref|XP_004302893.1| PREDICTED: uncharacterized protein LOC101314...    67   8e-09
ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arab...    66   1e-08
ref|XP_003609707.1| WD40 repeat-containing protein SMU1 [Medicag...    65   2e-08
ref|XP_006363647.1| PREDICTED: WD repeat-containing protein 43-l...    65   3e-08
ref|XP_002315482.1| hypothetical protein POPTR_0010s00760g [Popu...    65   3e-08
gb|EOY06606.1| Transducin family protein / WD-40 repeat family p...    64   4e-08
ref|XP_004231570.1| PREDICTED: WD repeat-containing protein 43-l...    63   9e-08
ref|NP_196685.2| transducin/WD40 domain-containing protein [Arab...    62   2e-07
dbj|BAC43034.1| unknown protein [Arabidopsis thaliana]                 62   2e-07
dbj|BAD95127.1| hypothetical protein [Arabidopsis thaliana]            62   2e-07
emb|CAB96659.1| putative protein [Arabidopsis thaliana]                62   2e-07
ref|XP_006287304.1| hypothetical protein CARUB_v10000497mg [Caps...    62   2e-07
ref|XP_006399624.1| hypothetical protein EUTSA_v10012983mg [Eutr...    61   3e-07
ref|XP_002516984.1| nucleotide binding protein, putative [Ricinu...    61   3e-07
gb|EXC39743.1| WD repeat-containing protein 43 [Morus notabilis]       60   6e-07
gb|ESW26315.1| hypothetical protein PHAVU_003G108800g [Phaseolus...    60   6e-07

>ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-like [Vitis vinifera]
           gi|296083309|emb|CBI22945.3| unnamed protein product
           [Vitis vinifera]
          Length = 628

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQ-AITEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V++WQSR+C+  YVLPWI  +LVNHSQ  +++E  + L++SL++ +KSRG AV       
Sbjct: 513 VTMWQSRSCSGNYVLPWIYTILVNHSQHIVSQEPVTQLLDSLHQSTKSRGTAVQSLLQLS 572

Query: 559 XXXXLVTAQIDKASQ 515
               LV AQIDKASQ
Sbjct: 573 GGLQLVMAQIDKASQ 587


>emb|CAN79552.1| hypothetical protein VITISV_025726 [Vitis vinifera]
          Length = 692

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQ-AITEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V++WQSR+C+  YVLPWI  +LVNHSQ  +++E    L++SL+  +KSRG AV       
Sbjct: 577 VTMWQSRSCSGNYVLPWIYTILVNHSQHIVSQEPVIQLLDSLHLSTKSRGTAVQSLLQLS 636

Query: 559 XXXXLVTAQIDKASQ 515
               LV AQIDKASQ
Sbjct: 637 GGLQLVMAQIDKASQ 651


>gb|EMJ26877.1| hypothetical protein PRUPE_ppa002827mg [Prunus persica]
          Length = 629

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI-TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V++WQ+R+ +  YVLPWI  +LVNHS  I ++E  + ++ SL KV+KSRGAA+       
Sbjct: 513 VAMWQTRSSSGNYVLPWIYSILVNHSHHIMSQEPETQMLSSLLKVTKSRGAAIQPLLQLS 572

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LV AQIDKA+   T +++
Sbjct: 573 GRLQLVMAQIDKATHTKTQVLS 594


>ref|XP_004508181.1| PREDICTED: WD repeat-containing protein 43-like [Cicer arietinum]
          Length = 627

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 32/71 (45%), Positives = 47/71 (66%)
 Frame = -2

Query: 727 WQSRACNAKYVLPWICCLLVNHSQAITEEYGSSLVESLYKVSKSRGAAVXXXXXXXXXXX 548
           WQSR+ + +YVLPWI  +LVNH   + EE  + +++S+Y+++ SRGA +           
Sbjct: 513 WQSRSSSREYVLPWIHSILVNHGHNVAEESITRMLDSVYQITNSRGATLQPLLQLSGRLQ 572

Query: 547 LVTAQIDKASQ 515
           LVT+QIDKASQ
Sbjct: 573 LVTSQIDKASQ 583


>ref|XP_004302893.1| PREDICTED: uncharacterized protein LOC101314869 [Fragaria vesca
           subsp. vesca]
          Length = 622

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQ-AITEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V++WQ+R+ +  YVLPWI C+LVNHS   ++EE  + ++ SL+KV+KSR AA+       
Sbjct: 507 VAIWQTRSSSGNYVLPWIYCILVNHSHYVMSEEPQTQVLSSLFKVTKSRKAAIQPLLQLS 566

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LV AQI+KA+   + +++
Sbjct: 567 GRLKLVMAQIEKATNTGSQILS 588


>ref|XP_002871466.1| hypothetical protein ARALYDRAFT_325654 [Arabidopsis lyrata subsp.
           lyrata] gi|297317303|gb|EFH47725.1| hypothetical protein
           ARALYDRAFT_325654 [Arabidopsis lyrata subsp. lyrata]
          Length = 615

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI-TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V++WQ+RAC  +++LPWI  ++VNHS  I ++E  + L+ +L K++KSRG A+       
Sbjct: 489 VAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQLLNTLVKITKSRGTALQQLLQLS 548

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LVTAQI+KA+   T  +A
Sbjct: 549 GRLQLVTAQINKAAVNQTQTVA 570


>ref|XP_003609707.1| WD40 repeat-containing protein SMU1 [Medicago truncatula]
           gi|355510762|gb|AES91904.1| WD40 repeat-containing
           protein SMU1 [Medicago truncatula]
          Length = 625

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/74 (41%), Positives = 47/74 (63%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAITEEYGSSLVESLYKVSKSRGAAVXXXXXXXX 557
           +++WQSR+   +YVLPW+  +LV H     EE  + +++S+YK++ SRGA +        
Sbjct: 507 LAIWQSRSSRREYVLPWMYSILVTHGHNAAEESVTHMLDSVYKITNSRGATLQSLLQLSG 566

Query: 556 XXXLVTAQIDKASQ 515
              LVT+QIDKASQ
Sbjct: 567 RLQLVTSQIDKASQ 580


>ref|XP_006363647.1| PREDICTED: WD repeat-containing protein 43-like [Solanum tuberosum]
          Length = 602

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAIT-EEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V+ WQSR+    +VLPWICC+LVNH++ +T +E  + L++S+ K++KS+G A+       
Sbjct: 490 VAAWQSRSSLGTHVLPWICCILVNHNEFVTSQEPLTPLLDSMNKLTKSKGVALNSLLQLS 549

Query: 559 XXXXLVTAQIDKASQFDTPMI 497
               LV AQI+KA    +P +
Sbjct: 550 GRLQLVMAQIEKADNKKSPTL 570


>ref|XP_002315482.1| hypothetical protein POPTR_0010s00760g [Populus trichocarpa]
           gi|222864522|gb|EEF01653.1| hypothetical protein
           POPTR_0010s00760g [Populus trichocarpa]
          Length = 617

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAIT--EEYGSSLVESLYKVSKSRGAAVXXXXXX 563
           V+ WQSR+ + K VLPWI C+LVNH Q I   E+  S ++ SL K++KSR  AV      
Sbjct: 501 VAKWQSRSNSGKCVLPWIYCILVNHGQYIVAQEKPESQMLNSLLKITKSRAVAVQPLLQL 560

Query: 562 XXXXXLVTAQIDKASQFDTPM 500
                LVTAQIDK +    P+
Sbjct: 561 AGRLQLVTAQIDKVALSKNPI 581


>gb|EOY06606.1| Transducin family protein / WD-40 repeat family protein, putative
           isoform 1 [Theobroma cacao] gi|508714710|gb|EOY06607.1|
           Transducin family protein / WD-40 repeat family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 624

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI-TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V LWQSR+ + KYVLPWI  +LVNH   I ++E  + ++ SL K ++SRG A+       
Sbjct: 505 VGLWQSRSNSEKYVLPWIYSVLVNHGPLIMSQESLTPMLNSLLKTTRSRGLAIQPLLQLS 564

Query: 559 XXXXLVTAQIDKASQ 515
               LVTAQIDKA+Q
Sbjct: 565 GRLQLVTAQIDKAAQ 579


>ref|XP_004231570.1| PREDICTED: WD repeat-containing protein 43-like [Solanum
           lycopersicum]
          Length = 602

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAIT-EEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           V+ WQSR+    +VLPWICC+LVNH++ +T +E  + L++S+ K++KS+G A+       
Sbjct: 490 VAAWQSRSSLGTHVLPWICCILVNHNEFVTSQEPLTPLLDSMNKLTKSKGVALNSLLQLS 549

Query: 559 XXXXLVTAQIDKASQFDTP 503
               LV AQI KA    +P
Sbjct: 550 GRLQLVMAQIGKADNKKSP 568


>ref|NP_196685.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|209414540|gb|ACI46510.1| At5g11240 [Arabidopsis
           thaliana] gi|332004268|gb|AED91651.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 615

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -2

Query: 733 SLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           ++WQ+RAC  +++LPWI  ++VNHS  I   E     L+ +L K++KSRG A+       
Sbjct: 490 AMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLLNTLVKITKSRGTALQQLLQLS 549

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LVTAQI+KA+   T + A
Sbjct: 550 GRLQLVTAQINKAAGSQTQITA 571


>dbj|BAC43034.1| unknown protein [Arabidopsis thaliana]
          Length = 615

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -2

Query: 733 SLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           ++WQ+RAC  +++LPWI  ++VNHS  I   E     L+ +L K++KSRG A+       
Sbjct: 490 AMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLLNTLVKITKSRGTALQQLLQLS 549

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LVTAQI+KA+   T + A
Sbjct: 550 GRLQLVTAQINKAAGSQTQITA 571


>dbj|BAD95127.1| hypothetical protein [Arabidopsis thaliana]
          Length = 140

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -2

Query: 733 SLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           ++WQ+RAC  +++LPWI  ++VNHS  I   E     L+ +L K++KSRG A+       
Sbjct: 15  AMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLLNTLVKITKSRGTALQQLLQLS 74

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LVTAQI+KA+   T + A
Sbjct: 75  GRLQLVTAQINKAAGSQTQITA 96


>emb|CAB96659.1| putative protein [Arabidopsis thaliana]
          Length = 606

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -2

Query: 733 SLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           ++WQ+RAC  +++LPWI  ++VNHS  I   E     L+ +L K++KSRG A+       
Sbjct: 486 AMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKNQQLLNTLVKITKSRGTALQQLLQLS 545

Query: 559 XXXXLVTAQIDKASQFDTPMIA 494
               LVTAQI+KA+   T + A
Sbjct: 546 GRLQLVTAQINKAAGSQTQITA 567


>ref|XP_006287304.1| hypothetical protein CARUB_v10000497mg [Capsella rubella]
           gi|482556010|gb|EOA20202.1| hypothetical protein
           CARUB_v10000497mg [Capsella rubella]
          Length = 612

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXX 563
           V++WQ+R C  + +LPWI  ++VNHS  I   E     L+ +L K++KSRGAA+      
Sbjct: 484 VAMWQTRGCGGRNLLPWIYSIMVNHSHYIMSQEPKNQQLLNTLLKITKSRGAALQQLLQL 543

Query: 562 XXXXXLVTAQIDKASQFDTPMIA 494
                LVTAQI+KA+    P  A
Sbjct: 544 SGRLQLVTAQINKAAGNQIPTTA 566


>ref|XP_006399624.1| hypothetical protein EUTSA_v10012983mg [Eutrema salsugineum]
           gi|557100714|gb|ESQ41077.1| hypothetical protein
           EUTSA_v10012983mg [Eutrema salsugineum]
          Length = 616

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXX 563
           V +WQ+R C  KY+LPWI  ++VNHS  I   E     L+ +L+ ++KSRG A+      
Sbjct: 489 VLMWQTRGCGGKYLLPWIYSIMVNHSHYIMSQEPKKQQLLNTLHNITKSRGTALQQLLQL 548

Query: 562 XXXXXLVTAQIDKAS 518
                LVTAQI+KA+
Sbjct: 549 SGRLQLVTAQINKAA 563


>ref|XP_002516984.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223544072|gb|EEF45598.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 586

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI--TEEYGSSLVESLYKVSKSRGAAVXXXXXX 563
           V+ WQSR+C+ KYVLPW+ C+LVNH   I   ++  + ++ SL +++KSRG A+      
Sbjct: 497 VAKWQSRSCSGKYVLPWMYCILVNHGHHIMAQDKPETQMLNSLLEITKSRGVAIQPLLQL 556

Query: 562 XXXXXLVTAQIDK 524
                LVTAQ+ K
Sbjct: 557 SGRLQLVTAQMMK 569


>gb|EXC39743.1| WD repeat-containing protein 43 [Morus notabilis]
          Length = 596

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHSQAI-TEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           +++WQS   N K V+PWI  +LV HS+ + +EE  +  + SL KV KSRGAA+       
Sbjct: 480 LTMWQSGLYNGKTVIPWIYSILVYHSRHLMSEESATQTLNSLIKVCKSRGAAIEPLLQLS 539

Query: 559 XXXXLVTAQIDKASQFDTPM 500
               LV AQI+KA+  +TP+
Sbjct: 540 GRLQLVIAQINKAAHPETPL 559


>gb|ESW26315.1| hypothetical protein PHAVU_003G108800g [Phaseolus vulgaris]
          Length = 681

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -2

Query: 736 VSLWQSRACNAKYVLPWICCLLVNHS-QAITEEYGSSLVESLYKVSKSRGAAVXXXXXXX 560
           ++ W+SR+ + KY+LPWI  +LVNH+   I EE  +  ++SL K++  RGAA+       
Sbjct: 566 LAAWESRSSSGKYILPWIYSILVNHAHNVIAEESDTLKLDSLDKITNFRGAALQPLLQLS 625

Query: 559 XXXXLVTAQIDKASQ 515
               LVT+QIDK SQ
Sbjct: 626 GRLQLVTSQIDKTSQ 640


Top