BLASTX nr result
ID: Rheum21_contig00024585
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024585
(337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB59125.1| hypothetical protein L484_014620 [Morus notabilis] 117 2e-24
ref|XP_006425713.1| hypothetical protein CICLE_v10025762mg [Citr... 116 3e-24
ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
emb|CBI17546.3| unnamed protein product [Vitis vinifera] 116 3e-24
emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera] 116 3e-24
ref|XP_004300620.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_006363148.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
gb|EOX91145.1| Tetratricopeptide repeat (TPR)-like superfamily p... 111 1e-22
ref|XP_004232380.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
gb|ABU45207.1| unknown [Solanum bulbocastanum] 110 3e-22
gb|ABU45173.1| unknown [Solanum melongena] 109 3e-22
emb|CAA05629.1| membrane-associated salt-inducible protein like ... 108 6e-22
ref|XP_002866998.1| pentatricopeptide repeat-containing protein ... 108 6e-22
ref|NP_195386.1| pentatricopeptide repeat-containing protein [Ar... 108 6e-22
ref|XP_004233512.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata] 106 4e-21
ref|XP_006282615.1| hypothetical protein CARUB_v10004839mg, part... 103 2e-20
gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora] 102 7e-20
ref|XP_002310210.2| pentatricopeptide repeat-containing family p... 100 2e-19
ref|XP_006409140.1| hypothetical protein EUTSA_v10023199mg, part... 100 3e-19
>gb|EXB59125.1| hypothetical protein L484_014620 [Morus notabilis]
Length = 400
Score = 117 bits (292), Expect = 2e-24
Identities = 56/74 (75%), Positives = 64/74 (86%)
Frame = -1
Query: 223 PISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETL 44
PISISR K+ LR EHDPDKALEIYSS+SD+Y+ P SRYAQDLTV+RLAK+RRF DIE+
Sbjct: 18 PISISRAKTMLRGEHDPDKALEIYSSVSDRYSSPTISRYAQDLTVRRLAKSRRFDDIESF 77
Query: 43 IEPHKKDPKIAQEP 2
+E HKKDPKI QEP
Sbjct: 78 LESHKKDPKIKQEP 91
>ref|XP_006425713.1| hypothetical protein CICLE_v10025762mg [Citrus clementina]
gi|568824774|ref|XP_006466769.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Citrus sinensis]
gi|557527703|gb|ESR38953.1| hypothetical protein
CICLE_v10025762mg [Citrus clementina]
Length = 403
Score = 116 bits (291), Expect = 3e-24
Identities = 57/76 (75%), Positives = 66/76 (86%)
Frame = -1
Query: 229 AAPISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIE 50
A+ IS+S+ KS+LRSE DPDKALEIYSS+S Y PVSSRYAQDLTV+RLAK++RF+DIE
Sbjct: 23 ASSISVSKAKSKLRSEFDPDKALEIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE 82
Query: 49 TLIEPHKKDPKIAQEP 2
TLIE HK DPKI QEP
Sbjct: 83 TLIESHKNDPKITQEP 98
>ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 116 bits (291), Expect = 3e-24
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -1
Query: 229 AAPISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIE 50
++ IS+SR KS LRSE DPD+ALEIYSS+S YT P++SRYAQDLTVKRLAK+RRFADIE
Sbjct: 32 SSSISVSRAKSILRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIE 91
Query: 49 TLIEPHKKDPKIAQEP 2
TLIE HK DPKI QEP
Sbjct: 92 TLIESHKNDPKITQEP 107
>emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 116 bits (291), Expect = 3e-24
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -1
Query: 229 AAPISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIE 50
++ IS+SR KS LRSE DPD+ALEIYSS+S YT P++SRYAQDLTVKRLAK+RRFADIE
Sbjct: 32 SSSISVSRAKSILRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIE 91
Query: 49 TLIEPHKKDPKIAQEP 2
TLIE HK DPKI QEP
Sbjct: 92 TLIESHKNDPKITQEP 107
>emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 116 bits (291), Expect = 3e-24
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -1
Query: 229 AAPISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIE 50
++ IS+SR KS LRSE DPD+ALEIYSS+S YT P++SRYAQDLTVKRLAK+RRFADIE
Sbjct: 34 SSSISVSRAKSILRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIE 93
Query: 49 TLIEPHKKDPKIAQEP 2
TLIE HK DPKI QEP
Sbjct: 94 TLIESHKNDPKITQEP 109
>ref|XP_004300620.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 461
Score = 114 bits (285), Expect = 1e-23
Identities = 54/73 (73%), Positives = 63/73 (86%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
ISIS+ KS+LRSEHDPDKALEIYSS+SD+Y+ P SSRY QD+ V+RLAK+ RFADIE+ I
Sbjct: 22 ISISKAKSKLRSEHDPDKALEIYSSVSDRYSSPTSSRYTQDIAVRRLAKSHRFADIESFI 81
Query: 40 EPHKKDPKIAQEP 2
E HK DPKI QEP
Sbjct: 82 ESHKNDPKIKQEP 94
>ref|XP_006363148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum tuberosum]
Length = 406
Score = 111 bits (277), Expect = 1e-22
Identities = 52/75 (69%), Positives = 63/75 (84%)
Frame = -1
Query: 226 APISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIET 47
A ISIS+ KS+L++EHDPDKALEIYSS+SD+Y P+SSRYAQ+ TVKRLAK+ RF+DIE
Sbjct: 30 ATISISKAKSKLKAEHDPDKALEIYSSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIEN 89
Query: 46 LIEPHKKDPKIAQEP 2
+E HK PKI QEP
Sbjct: 90 FLESHKNSPKITQEP 104
>gb|EOX91145.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 411
Score = 111 bits (277), Expect = 1e-22
Identities = 54/73 (73%), Positives = 65/73 (89%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
ISIS+ K++LR+E+DPDKALEIYSS+S Y+ P SSRYAQDLTV+RLAK+RRF+DIE+LI
Sbjct: 29 ISISQAKNKLRTEYDPDKALEIYSSVSKHYSSPSSSRYAQDLTVRRLAKSRRFSDIESLI 88
Query: 40 EPHKKDPKIAQEP 2
E HK DPKI QEP
Sbjct: 89 ESHKTDPKITQEP 101
>ref|XP_004232380.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum lycopersicum]
Length = 405
Score = 110 bits (274), Expect = 3e-22
Identities = 51/73 (69%), Positives = 62/73 (84%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
ISIS+ KS+L++EHDPDKALEIYSS+SD+Y P+SSRYAQ+ TVKRLAK+ RF+DIE +
Sbjct: 31 ISISKAKSKLKAEHDPDKALEIYSSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIENFL 90
Query: 40 EPHKKDPKIAQEP 2
E HK PKI QEP
Sbjct: 91 ESHKNSPKITQEP 103
>gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 110 bits (274), Expect = 3e-22
Identities = 51/73 (69%), Positives = 62/73 (84%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
ISIS+ KS+L++EHDPDKALEIYSS+SD+Y P+SSRYAQ+ TVKRLAK+ RF+DIE +
Sbjct: 31 ISISKAKSKLKAEHDPDKALEIYSSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIENFL 90
Query: 40 EPHKKDPKIAQEP 2
E HK PKI QEP
Sbjct: 91 ESHKNSPKITQEP 103
>gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 109 bits (273), Expect = 3e-22
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = -1
Query: 229 AAPISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIE 50
AA ISIS+ KS+L++EHDPDKALEIYSS+SD+Y P+SSRYAQ+ VKRLAK+ RF+DIE
Sbjct: 26 AATISISKAKSKLKAEHDPDKALEIYSSVSDRYISPLSSRYAQEYIVKRLAKSHRFSDIE 85
Query: 49 TLIEPHKKDPKIAQEP 2
+E HK PKI QEP
Sbjct: 86 NFLESHKNSPKITQEP 101
>emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 108 bits (271), Expect = 6e-22
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
IS+S+ KS LR EHDPDKAL+IY+++SD PVSSRYAQ+LTV+RLAK RRF+DIETLI
Sbjct: 47 ISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLI 106
Query: 40 EPHKKDPKIAQEP 2
E HK DPKI +EP
Sbjct: 107 ESHKNDPKIKEEP 119
>ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312834|gb|EFH43257.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 411
Score = 108 bits (271), Expect = 6e-22
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
IS+S+ KS LR EHDPDKAL+IY+++SD PVSSRYAQ+LTV+RLAK RRF+DIETLI
Sbjct: 31 ISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLI 90
Query: 40 EPHKKDPKIAQEP 2
E HK DPKI +EP
Sbjct: 91 ESHKNDPKIKEEP 103
>ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein
[Arabidopsis thaliana] gi|7270616|emb|CAB80334.1|
salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680
[Arabidopsis thaliana] gi|24111267|gb|AAN46757.1|
At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 108 bits (271), Expect = 6e-22
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
IS+S+ KS LR EHDPDKAL+IY+++SD PVSSRYAQ+LTV+RLAK RRF+DIETLI
Sbjct: 31 ISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLI 90
Query: 40 EPHKKDPKIAQEP 2
E HK DPKI +EP
Sbjct: 91 ESHKNDPKIKEEP 103
>ref|XP_004233512.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum lycopersicum]
Length = 416
Score = 108 bits (269), Expect = 1e-21
Identities = 52/75 (69%), Positives = 63/75 (84%)
Frame = -1
Query: 226 APISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIET 47
A ISIS+ KS+L+SEHDPDKAL+IYSS+S+ YT P+SSRYAQ+ TVKRLAK+ RF+DIE
Sbjct: 34 ATISISKAKSKLKSEHDPDKALKIYSSVSNHYTSPLSSRYAQEYTVKRLAKSHRFSDIEA 93
Query: 46 LIEPHKKDPKIAQEP 2
+E HK D KI QEP
Sbjct: 94 FLESHKDDKKITQEP 108
>gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 106 bits (264), Expect = 4e-21
Identities = 50/75 (66%), Positives = 62/75 (82%)
Frame = -1
Query: 226 APISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIET 47
A ISIS+ KS+L++EHDPDK LEIYSS+SD+Y P+SSRYAQ+ TVKRLAK+ RF+DIE+
Sbjct: 27 ATISISKAKSKLKAEHDPDKVLEIYSSVSDRYISPLSSRYAQEYTVKRLAKSHRFSDIES 86
Query: 46 LIEPHKKDPKIAQEP 2
+E HK KI QEP
Sbjct: 87 FLESHKNSSKITQEP 101
>ref|XP_006282615.1| hypothetical protein CARUB_v10004839mg, partial [Capsella rubella]
gi|482551320|gb|EOA15513.1| hypothetical protein
CARUB_v10004839mg, partial [Capsella rubella]
Length = 435
Score = 103 bits (258), Expect = 2e-20
Identities = 50/73 (68%), Positives = 61/73 (83%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
I++S+ KS LR EHDPDKAL+IY+++SD PVSSRYAQ+LTV+RLAK RF+DIETLI
Sbjct: 58 ITVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCSRFSDIETLI 117
Query: 40 EPHKKDPKIAQEP 2
E KKDPKI +EP
Sbjct: 118 ESSKKDPKIKEEP 130
>gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 102 bits (253), Expect = 7e-20
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIETLI 41
IS SR KS+LR +DPDKALEIYSS+S YT P+SSRY Q+ TV+RLAK+ RF+DIE+ +
Sbjct: 41 ISTSRAKSQLRYVYDPDKALEIYSSVSPNYTSPLSSRYTQEYTVRRLAKSHRFSDIESFL 100
Query: 40 EPHKKDPKIAQEP 2
E HK DPKI QEP
Sbjct: 101 ESHKNDPKITQEP 113
>ref|XP_002310210.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334733|gb|EEE90660.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 396
Score = 100 bits (250), Expect = 2e-19
Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = -1
Query: 220 ISISREKSRLRSEHDPDKALEIYSSLSDKYTCP-VSSRYAQDLTVKRLAKARRFADIETL 44
ISI++ KSRLR+EHDPDKAL I+SS S + P V SRYAQDLTV+RLAK+ RFADIE+L
Sbjct: 18 ISITKAKSRLRTEHDPDKALAIFSSASSNDSSPPVVSRYAQDLTVRRLAKSHRFADIESL 77
Query: 43 IEPHKKDPKIAQEP 2
+E HK DPKI QEP
Sbjct: 78 MESHKSDPKIKQEP 91
>ref|XP_006409140.1| hypothetical protein EUTSA_v10023199mg, partial [Eutrema
salsugineum] gi|557110302|gb|ESQ50593.1| hypothetical
protein EUTSA_v10023199mg, partial [Eutrema salsugineum]
Length = 411
Score = 100 bits (248), Expect = 3e-19
Identities = 47/75 (62%), Positives = 61/75 (81%)
Frame = -1
Query: 226 APISISREKSRLRSEHDPDKALEIYSSLSDKYTCPVSSRYAQDLTVKRLAKARRFADIET 47
A I++S+ KS+LR HDPDKAL IY+S+S+ + P+SSRYA +LTV+RLAK++RF+DIE
Sbjct: 31 AAITVSKAKSKLRKVHDPDKALAIYNSVSNNSSSPISSRYAMELTVRRLAKSQRFSDIEA 90
Query: 46 LIEPHKKDPKIAQEP 2
LIE HK DPKI EP
Sbjct: 91 LIESHKNDPKIKTEP 105