BLASTX nr result

ID: Rheum21_contig00024488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024488
         (575 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531568.1| conserved hypothetical protein [Ricinus comm...    60   5e-07
emb|CAN72737.1| hypothetical protein VITISV_021863 [Vitis vinifera]    56   6e-06
ref|XP_002278420.2| PREDICTED: scarecrow-like protein 14-like [V...    56   8e-06
emb|CBI31660.3| unnamed protein product [Vitis vinifera]               56   8e-06

>ref|XP_002531568.1| conserved hypothetical protein [Ricinus communis]
           gi|223528798|gb|EEF30804.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 741

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 39/130 (30%), Positives = 59/130 (45%)
 Frame = +1

Query: 178 LVDSAMEKLYQSLQGISFYDQMDLCLSSQDPFSGLRLKDLNMNPNLIAPTVXXXXXXXXX 357
           ++D  +  LY S+ G+   D++   LS Q+  +GL+L    +N N +             
Sbjct: 2   VMDQPLIGLYGSVSGLKLNDEILSVLSGQELDNGLQLDRDFVNQNYVKLPPYATPSFSVS 61

Query: 358 XXXXXFEGDNQEEYDFSDLVLNYINQVLMEEDGXXXXXXXXXXXXXXXXXXXXXYEAIGK 537
                 +GD  E++DFSD+VL YI+ +LMEED                      YE IG+
Sbjct: 62  SSTASQDGDLHEDFDFSDVVLKYISDMLMEEDIEEKTCMFQESSAALQAAEKSLYELIGE 121

Query: 538 EYPPPQNNPS 567
           +YPP  N  S
Sbjct: 122 KYPPSINYDS 131


>emb|CAN72737.1| hypothetical protein VITISV_021863 [Vitis vinifera]
          Length = 718

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
 Frame = +1

Query: 181 VDSAMEKLYQSLQGISFYDQMDLCLSSQDPFSGLRLKD--LNMNPNLIAP-TVXXXXXXX 351
           +D  +  LY S+ GI F +     LS ++P SGL L+   L  N   I P          
Sbjct: 1   MDEHLSGLYPSVNGIKFXEVYGSILSGENPSSGLGLQVPFLEQNNVFIPPFQPDPSGGNV 60

Query: 352 XXXXXXXFEGDNQEEYDFSDLVLNYINQVLMEEDGXXXXXXXXXXXXXXXXXXXXXYEAI 531
                   E D QE+ DFSD+V+ Y++Q+LMEED                      YE I
Sbjct: 61  ASWSSVGVEEDPQEDCDFSDVVIRYVSQLLMEED-VEEKTRMFQESLALEATEKSFYEVI 119

Query: 532 GKEYPPPQNN 561
           GKEYP  +++
Sbjct: 120 GKEYPASKDH 129


>ref|XP_002278420.2| PREDICTED: scarecrow-like protein 14-like [Vitis vinifera]
          Length = 737

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
 Frame = +1

Query: 181 VDSAMEKLYQSLQGISFYDQMDLCLSSQDPFSGLRLKD--LNMNPNLIAP-TVXXXXXXX 351
           +D  +  LY S+ GI F +     LS ++P SGL L+   L  N   I P          
Sbjct: 1   MDEHLSGLYPSVNGIKFSEVYGSILSGENPSSGLGLQVPFLEQNNVFIPPFQPDPSGGNV 60

Query: 352 XXXXXXXFEGDNQEEYDFSDLVLNYINQVLMEEDGXXXXXXXXXXXXXXXXXXXXXYEAI 531
                   E D QE+ DFSD+V+ Y++Q+LMEED                      YE I
Sbjct: 61  ASWSSVGVEEDPQEDCDFSDVVIRYVSQLLMEED-VEEKTRMFQESLALEATEKSFYEVI 119

Query: 532 GKEYPPPQNN 561
           GKEYP  +++
Sbjct: 120 GKEYPASKDH 129


>emb|CBI31660.3| unnamed protein product [Vitis vinifera]
          Length = 594

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
 Frame = +1

Query: 181 VDSAMEKLYQSLQGISFYDQMDLCLSSQDPFSGLRLKD--LNMNPNLIAP-TVXXXXXXX 351
           +D  +  LY S+ GI F +     LS ++P SGL L+   L  N   I P          
Sbjct: 1   MDEHLSGLYPSVNGIKFSEVYGSILSGENPSSGLGLQVPFLEQNNVFIPPFQPDPSGGNV 60

Query: 352 XXXXXXXFEGDNQEEYDFSDLVLNYINQVLMEEDGXXXXXXXXXXXXXXXXXXXXXYEAI 531
                   E D QE+ DFSD+V+ Y++Q+LMEED                      YE I
Sbjct: 61  ASWSSVGVEEDPQEDCDFSDVVIRYVSQLLMEED-VEEKTRMFQESLALEATEKSFYEVI 119

Query: 532 GKEYPPPQNN 561
           GKEYP  +++
Sbjct: 120 GKEYPASKDH 129


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