BLASTX nr result

ID: Rheum21_contig00024446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024446
         (554 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857106.1| hypothetical protein AMTR_s00065p00126320 [A...   105   1e-36
ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago ...    61   5e-19
ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago ...    61   3e-08
ref|XP_006290089.1| hypothetical protein CARUB_v10003734mg [Caps...    59   1e-06

>ref|XP_006857106.1| hypothetical protein AMTR_s00065p00126320 [Amborella trichopoda]
           gi|548861189|gb|ERN18573.1| hypothetical protein
           AMTR_s00065p00126320 [Amborella trichopoda]
          Length = 159

 Score =  105 bits (261), Expect(2) = 1e-36
 Identities = 66/104 (63%), Positives = 71/104 (68%)
 Frame = +2

Query: 71  MADLSPNLLKQPKGLALSRLENDLLWHGLVSYSRSSDKNRHFFESMVLASFFPPPLELVH 250
           MADLSP +   P      RL   L   GLVSYS SS K      + + A F PP LELVH
Sbjct: 1   MADLSP-IHSWP------RLVPPLRQQGLVSYSCSSYKRT---ATSLKAWFLPPSLELVH 50

Query: 251 SLGDPLLSRSSVCSSFRPVSEISAHCSHLRGSSHLDSTRTLVPR 382
           SLGDPLLSRSSV SSFRPVS ISAHCSHL+ S HLDST+TLVPR
Sbjct: 51  SLGDPLLSRSSVFSSFRPVSGISAHCSHLQASLHLDSTKTLVPR 94



 Score = 74.3 bits (181), Expect(2) = 1e-36
 Identities = 36/52 (69%), Positives = 40/52 (76%)
 Frame = +3

Query: 396 KAARSKPAL*PTTKNEPCDETRTFSMLRFPPVRSRVGLGEHPSDCLRGCKRA 551
           + A  KPAL  TT NEPCD+ +TF MLRFP V S+VGLGEHPSDCLR  KRA
Sbjct: 94  RTACLKPALGTTTPNEPCDKMQTFPMLRFPLVHSQVGLGEHPSDCLRESKRA 145


>ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago truncatula]
           gi|355480609|gb|AES61812.1| hypothetical protein
           MTR_1g088810 [Medicago truncatula]
          Length = 444

 Score = 60.8 bits (146), Expect(2) = 5e-19
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   EMKMGGIVVCSTFVALVFFPEYSYGRSVTQPT 96
           EMK GGIVVCST VALV+ PEYSYGRSVTQPT
Sbjct: 113 EMKTGGIVVCSTLVALVYIPEYSYGRSVTQPT 144



 Score = 59.3 bits (142), Expect(2) = 5e-19
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +2

Query: 170 RSSDKNRHFFESMVLASFFPPPLELVHSLGDPLLSRSS 283
           +S D +RHF ESMVLA  FPP LEL+HSLGDPLLSR S
Sbjct: 146 KSKDSDRHFSESMVLAFLFPPSLELIHSLGDPLLSRWS 183


>ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago truncatula]
           gi|355477334|gb|AES58537.1| hypothetical protein
           MTR_1g005270 [Medicago truncatula]
          Length = 126

 Score = 60.8 bits (146), Expect(2) = 3e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   EMKMGGIVVCSTFVALVFFPEYSYGRSVTQPT 96
           EMK GGIVVCST VALV+ PEYSYGRSVTQPT
Sbjct: 76  EMKTGGIVVCSTLVALVYIPEYSYGRSVTQPT 107



 Score = 22.7 bits (47), Expect(2) = 3e-08
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 98  KQPKGLALSRLEND 139
           K+ KGL  SRLEND
Sbjct: 108 KKSKGLTPSRLEND 121


>ref|XP_006290089.1| hypothetical protein CARUB_v10003734mg [Capsella rubella]
           gi|482558795|gb|EOA22987.1| hypothetical protein
           CARUB_v10003734mg [Capsella rubella]
          Length = 142

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
 Frame = -2

Query: 505 PTRERTGGNRSMENVRVSSQGSFLVVGHRAGF------ERAALSDQGP--GHKGPGTIQV 350
           P  E +   + + +  + ++ ++ VV   AG       E  ++S +G   G+ GPGT+QV
Sbjct: 18  PDDEASSSYKDVSDATLPARTTYYVVIFVAGSVMRNKGEMLSISQKGTLSGNTGPGTLQV 77

Query: 349 RRTPEVTAMSRNLTHRPKRRANT 281
           RRT EVT MSRNLTHRPKR  NT
Sbjct: 78  RRTLEVTTMSRNLTHRPKRCENT 100


Top