BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024424
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003112417.1| hypothetical protein CRE_30774 [Caenorhabdit...    57   3e-06
gb|EHK25632.1| hypothetical protein TRIVIDRAFT_167877 [Trichoder...    55   7e-06
ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medic...    55   1e-05
ref|XP_003102186.1| hypothetical protein CRE_06785 [Caenorhabdit...    55   1e-05
ref|XP_002409338.1| cellular nucleic acid binding protein, putat...    55   1e-05
gb|AAR22584.1| gag protein [Small ruminant lentivirus]                 55   1e-05

>ref|XP_003112417.1| hypothetical protein CRE_30774 [Caenorhabditis remanei]
           gi|308266985|gb|EFP10938.1| hypothetical protein
           CRE_30774 [Caenorhabditis remanei]
          Length = 901

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = +3

Query: 90  ARSDETQNGSTQRSGQGKNPIQCYNCGMHEHKSNECLKDKKTCFGCGKEGHMQMFCQRRK 269
           +  D+++  +T   G  +   +C+NCG   H+  +C K   TCF C K+GHM  FC+ RK
Sbjct: 267 SNQDQSREKNTSEDGNSEGG-KCWNCGKRGHRKPDCPKPLTTCFDCQKKGHMSSFCRSRK 325

Query: 270 GAESHQ 287
            + S +
Sbjct: 326 DSSSRK 331


>gb|EHK25632.1| hypothetical protein TRIVIDRAFT_167877 [Trichoderma virens Gv29-8]
          Length = 178

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = +3

Query: 114 GSTQRSGQGKNPIQCYNCGMHEHKSNEC---LKDKKTCFGCGKEGHMQMFCQRRKGAESH 284
           G   R    K P +CYNCG   H S +C   +KD K+C+ CG++GH+   C +  GA S 
Sbjct: 16  GHQARDCPTKGPAKCYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRDCPQAGGAGSG 75

Query: 285 QGS 293
           Q +
Sbjct: 76  QST 78


>ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355522509|gb|AET02963.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 544

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/71 (38%), Positives = 38/71 (53%)
 Frame = +3

Query: 51  RPTPPSDFSKSGRARSDETQNGSTQRSGQGKNPIQCYNCGMHEHKSNECLKDKKTCFGCG 230
           RP P S  +  G+ R ++ +  + +        I CY CG   HKSN C KD+K CF CG
Sbjct: 211 RPKPYSAPADKGKQRLNDERRPNRR---DAPAEIVCYKCGDKGHKSNVCTKDEKKCFRCG 267

Query: 231 KEGHMQMFCQR 263
           ++GH    C+R
Sbjct: 268 QKGHTLADCKR 278


>ref|XP_003102186.1| hypothetical protein CRE_06785 [Caenorhabditis remanei]
           gi|308262341|gb|EFP06294.1| hypothetical protein
           CRE_06785 [Caenorhabditis remanei]
          Length = 900

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = +3

Query: 90  ARSDETQNGSTQRSGQGKNPIQCYNCGMHEHKSNECLKDKKTCFGCGKEGHMQMFCQRRK 269
           +  D++++ +T   G  +   +C+NCG   H   +C K   TCF C K+GHM  FC+ RK
Sbjct: 267 SNQDQSRDKNTSEDGNSEGG-KCWNCGKRGHIKPDCPKPLTTCFDCQKKGHMSSFCRSRK 325

Query: 270 GAESHQ 287
            + S +
Sbjct: 326 DSSSRK 331


>ref|XP_002409338.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
           gi|215501340|gb|EEC10834.1| cellular nucleic acid
           binding protein, putative [Ixodes scapularis]
          Length = 189

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/61 (39%), Positives = 34/61 (55%)
 Frame = +3

Query: 84  GRARSDETQNGSTQRSGQGKNPIQCYNCGMHEHKSNECLKDKKTCFGCGKEGHMQMFCQR 263
           G  R   T+ G ++    G  P+ CYNCG   H + EC  D KTC+ CGK+GH+   C +
Sbjct: 130 GGMRGGSTRMGDSRSFSSG--PMSCYNCGKTGHIARECPDDGKTCYVCGKQGHISRDCGQ 187

Query: 264 R 266
           +
Sbjct: 188 K 188


>gb|AAR22584.1| gag protein [Small ruminant lentivirus]
          Length = 238

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = +3

Query: 114 GSTQRSGQGKNPIQCYNCGMHEHKSNECLKDKKTCFGCGKEGHMQMFCQRRKGAESHQGS 293
           G ++R G    P +CYNCG   H++ EC +    C  CGK GHMQ  C+ +KG E  QG+
Sbjct: 169 GKSKRDGP---PQRCYNCGKPGHRAKEC-RQGVMCHNCGKRGHMQRECRGKKG-ERQQGN 223

Query: 294 VRQNNR--PRFNPVE 332
            R+  R  P   P+E
Sbjct: 224 GRRGIRVVPSAPPME 238