BLASTX nr result
ID: Rheum21_contig00024313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00024313
(697 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_001936560.1| hypothetical chloroplast RF2 [Fagopyrum escu... 406 e-111
gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelu... 257 2e-66
gb|ABQ14823.1| Ycf2 [Daphniphyllum sp. 205-82] 256 4e-66
gb|ABQ14849.1| Ycf2 [Itea virginica] 256 6e-66
ref|YP_004563911.1| hypothetical chloroplast RF2 [Nelumbo lutea]... 255 1e-65
ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasilie... 255 1e-65
gb|ADD30886.1| putative RF2 protein [Nelumbo nucifera] 255 1e-65
gb|ADD30890.1| putative RF2 protein [Berberidopsis corallina] gi... 254 1e-65
gb|ABQ14899.1| Ycf2 [Peridiscus lucidus] 254 1e-65
ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucife... 254 2e-65
ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) ... 254 2e-65
gb|ABQ14831.1| Ycf2 [Hamamelis japonica] 254 2e-65
gb|ABQ14867.1| Ycf2 [Liquidambar styraciflua] gi|290489024|gb|AD... 254 2e-65
ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides... 253 3e-65
gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron arali... 253 3e-65
gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides] 253 3e-65
gb|ADD30895.1| putative RF2 protein [Heuchera sanguinea] gi|3408... 253 3e-65
gb|ADD30883.1| putative RF2 protein [Ilex cornuta] gi|340806994|... 253 3e-65
gb|ABQ14840.1| Ycf2 [Heuchera micrantha] 253 3e-65
ref|YP_567121.1| Ycf2 [Vitis vinifera] gi|91984056|ref|YP_567140... 253 3e-65
>ref|YP_001936560.1| hypothetical chloroplast RF2 [Fagopyrum esculentum subsp. ancestrale]
gi|189162331|ref|YP_001936578.1| hypothetical chloroplast
RF2 [Fagopyrum esculentum subsp. ancestrale]
gi|166065400|gb|ABY79775.1| hypothetical chloroplast RF2
[Fagopyrum esculentum subsp. ancestrale]
gi|166065417|gb|ABY79792.1| hypothetical chloroplast RF2
[Fagopyrum esculentum subsp. ancestrale]
Length = 2086
Score = 406 bits (1043), Expect = e-111
Identities = 206/231 (89%), Positives = 208/231 (90%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNKLD 182
NSFHFPSHGKPKPFSFRLAL PSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNKLD
Sbjct: 1383 NSFHFPSHGKPKPFSFRLALYPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNKLD 1442
Query: 183 FKIVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLDSDPE 362
FKIVIDDLDPEDYMEAL YM ALKDVDD+D RDSIYSNLDSDPE
Sbjct: 1443 FKIVIDDLDPEDYMEALDDVDIGGIDDDSDPAKEYMYALKDVDDVDDRDSIYSNLDSDPE 1502
Query: 363 LREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESESLGLLL 542
LREEYT DDEILRYI+ELEIDLA INLQFELARTMSPCIVWIPNIHDLYVDESESLGLLL
Sbjct: 1503 LREEYTVDDEILRYIVELEIDLAPINLQFELARTMSPCIVWIPNIHDLYVDESESLGLLL 1562
Query: 543 NYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
NYLSGD ERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1563 NYLSGDSERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1613
>gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo lutea]
gi|383286951|gb|AFH01600.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo lutea]
Length = 2304
Score = 257 bits (657), Expect = 2e-66
Identities = 150/237 (63%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1612 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1669
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K + DD+D +D D + D DDID D I + D
Sbjct: 1670 DDKPKGYLNDDIDIDD-----------------------SDDIDDSDDIDDSDDIDDSND 1706
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
D +L E L + +ID I LQFELA+ MSPCI+WIPNIHDLYV+ES
Sbjct: 1707 IDDDLDTELLTMTNALTMYMTPKIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYL 1766
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1767 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1823
>gb|ABQ14823.1| Ycf2 [Daphniphyllum sp. 205-82]
Length = 2303
Score = 256 bits (655), Expect = 4e-66
Identities = 155/240 (64%), Positives = 170/240 (70%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1618 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1675
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K +IDD+D +D + +DA D+D DID D I
Sbjct: 1676 DNKPKGFLIDDIDIDDSDD--------------------IDASDDIDASDDIDDSDDIDR 1715
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1716 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1771
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1772 NYLSLGLLVNYLSRDCERCSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1831
>gb|ABQ14849.1| Ycf2 [Itea virginica]
Length = 2306
Score = 256 bits (653), Expect = 6e-66
Identities = 155/240 (64%), Positives = 170/240 (70%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1618 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1675
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K +IDD+D ED + +DA D+D DID D I
Sbjct: 1676 DNKPKGFLIDDIDIEDSDD--------------------IDASDDIDASDDIDDSDDIDR 1715
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1716 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1771
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1772 NYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1831
>ref|YP_004563911.1| hypothetical chloroplast RF2 [Nelumbo lutea]
gi|334362011|ref|YP_004563928.1| hypothetical chloroplast
RF2 [Nelumbo lutea] gi|224474179|gb|ACN49368.1|
hypothetical chloroplast RF2 [Nelumbo lutea]
gi|224474196|gb|ACN49385.1| hypothetical chloroplast RF2
[Nelumbo lutea]
Length = 2304
Score = 255 bits (651), Expect = 1e-65
Identities = 149/237 (62%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1612 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1669
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K + DD+D +D D + D DDID D I + D
Sbjct: 1670 DDKPKGYLNDDIDIDD-----------------------SDDIDDSDDIDDSDDIDDSND 1706
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
D +L E L + +ID I LQFELA+ M PCI+WIPNIHDLYV+ES
Sbjct: 1707 IDDDLDTELLTMTNALTMYMTPKIDRFDITLQFELAKAMFPCIIWIPNIHDLYVNESNYL 1766
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1767 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1823
>ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasiliensis]
gi|326909454|ref|YP_004327705.1| hypothetical chloroplast
RF2 [Hevea brasiliensis] gi|308523548|gb|ADO33598.1|
hypothetical chloroplast RF2 [Hevea brasiliensis]
gi|308523568|gb|ADO33618.1| hypothetical chloroplast RF2
[Hevea brasiliensis]
Length = 2303
Score = 255 bits (651), Expect = 1e-65
Identities = 152/239 (63%), Positives = 167/239 (69%), Gaps = 8/239 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSYLPFITVFLNK L
Sbjct: 1611 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFL 1668
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSI--YSN 344
D K +IDD D D + + D + D DDID D I +
Sbjct: 1669 DNKPKGFLIDDSDDIDDSDDIDDS----------------DDIDDSDDIDVSDDIDVSDD 1712
Query: 345 LDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE 524
+D D + E+ +L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1713 IDRDFDTELEFLTRMNVLTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESN 1772
Query: 525 --SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1773 YLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1831
>gb|ADD30886.1| putative RF2 protein [Nelumbo nucifera]
Length = 2304
Score = 255 bits (651), Expect = 1e-65
Identities = 149/237 (62%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1612 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1669
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K + DD+D +D D + D DDID D I + D
Sbjct: 1670 DDKPKGYLNDDIDIDD-----------------------SDDIDDSDDIDDSDDIDDSND 1706
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
D +L E L + +ID I LQFELA+ MSPCI+WIPNIHDLYV+ES
Sbjct: 1707 IDDDLDTELLTMTNALTMYMTPKIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYL 1766
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNK NTCIKIRRLLIPQQ
Sbjct: 1767 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKSNTCIKIRRLLIPQQ 1823
>gb|ADD30890.1| putative RF2 protein [Berberidopsis corallina]
gi|340807100|gb|AEK71702.1| hypothetical chloroplast RF2
[Berberidopsis corallina]
Length = 2298
Score = 254 bits (650), Expect = 1e-65
Identities = 154/240 (64%), Positives = 170/240 (70%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1613 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1670
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K +IDD+D +D + +DA D+D DID D I
Sbjct: 1671 DNKPKGFLIDDIDIDDSDD--------------------IDASDDIDASDDIDDSDDIDR 1710
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1711 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1766
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1767 NYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1826
>gb|ABQ14899.1| Ycf2 [Peridiscus lucidus]
Length = 2286
Score = 254 bits (650), Expect = 1e-65
Identities = 153/237 (64%), Positives = 166/237 (70%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1608 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1665
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D D D + D DDID D I +LD
Sbjct: 1666 DNKPKGFLIDDIDDIDDS----------------------DDIDDSDDIDDSDDIDRDLD 1703
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1704 TELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYL 1759
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1760 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1816
>ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|334362111|ref|YP_004564164.1| hypothetical chloroplast
RF2 [Nelumbo nucifera] gi|224474267|gb|ACN49453.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|224474284|gb|ACN49470.1| hypothetical chloroplast RF2
[Nelumbo nucifera] gi|340807030|gb|AEK71646.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|383286841|gb|AFH01491.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|383286862|gb|AFH01512.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|519666955|gb|AGO98567.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|519666972|gb|AGO98584.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
Length = 2310
Score = 254 bits (649), Expect = 2e-65
Identities = 149/237 (62%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1612 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1669
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K + DD+D +D + D + D DDID D I + D
Sbjct: 1670 DDKPKGYLNDDIDIDDSDDI-----------------DDSDDIDDSDDIDDSDDIDDSND 1712
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
D +L E L + +ID I LQFELA+ MSPCI+WIPNIHDLYV+ES
Sbjct: 1713 IDDDLDTELLTMTNALTMYMTPKIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYL 1772
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNK NTCIKIRRLLIPQQ
Sbjct: 1773 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKSNTCIKIRRLLIPQQ 1829
>ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) [Liquidambar formosana]
gi|568244972|ref|YP_008963754.1| hypothetical chloroplast
RF21 (chloroplast) [Liquidambar formosana]
gi|491650414|gb|AGL13474.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
gi|491650433|gb|AGL13493.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
Length = 2297
Score = 254 bits (648), Expect = 2e-65
Identities = 154/240 (64%), Positives = 167/240 (69%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1618 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1675
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K +IDD+D +DA D+D DID D I
Sbjct: 1676 DNKPKGFLIDDID--------------------------IDASDDIDASDDIDASDDIDR 1709
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1710 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1765
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1766 NYLSLGLLVNYLSRDCERCSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1825
>gb|ABQ14831.1| Ycf2 [Hamamelis japonica]
Length = 2292
Score = 254 bits (648), Expect = 2e-65
Identities = 154/240 (64%), Positives = 167/240 (69%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1618 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1675
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K +IDD+D +DA D+D DID D I
Sbjct: 1676 DNKPKGFLIDDID--------------------------IDASDDIDASDDIDASDDIDR 1709
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1710 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1765
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1766 NYLSLGLLVNYLSRDCERCSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1825
>gb|ABQ14867.1| Ycf2 [Liquidambar styraciflua] gi|290489024|gb|ADD30896.1| putative
RF2 protein [Liquidambar styraciflua]
gi|340807164|gb|AEK71758.1| hypothetical chloroplast RF2
[Liquidambar styraciflua]
Length = 2297
Score = 254 bits (648), Expect = 2e-65
Identities = 154/240 (64%), Positives = 167/240 (69%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1618 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1675
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K +IDD+D +DA D+D DID D I
Sbjct: 1676 DNKPKGFLIDDID--------------------------IDASDDIDASDDIDASDDIDR 1709
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1710 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1765
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1766 NYLSLGLLVNYLSRDCERCSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1825
>ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides]
gi|511348592|ref|YP_008081518.1| Ycf2 (chloroplast)
[Trochodendron aralioides] gi|479279340|gb|AGJ72193.1|
Ycf2 (chloroplast) [Trochodendron aralioides]
gi|479279357|gb|AGJ72210.1| Ycf2 (chloroplast)
[Trochodendron aralioides]
Length = 2298
Score = 253 bits (647), Expect = 3e-65
Identities = 149/237 (62%), Positives = 168/237 (70%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1621 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1678
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D +D + + D +DID D I +LD
Sbjct: 1679 DDKPKGYLIDDIDIDD-----------------------SEDIDDSEDIDDSDDIDDDLD 1715
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
+ E T + + Y+ + +ID I LQFELA+ MSPCI+WIPNIHDLYV+ES
Sbjct: 1716 T-----ELLTMTNALTMYMTQ-KIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYL 1769
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1770 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1826
>gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron aralioides]
Length = 2293
Score = 253 bits (647), Expect = 3e-65
Identities = 149/237 (62%), Positives = 168/237 (70%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1616 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1673
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D +D + + D +DID D I +LD
Sbjct: 1674 DDKPKGYLIDDIDIDD-----------------------SEDIDDSEDIDDSDDIDDDLD 1710
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
+ E T + + Y+ + +ID I LQFELA+ MSPCI+WIPNIHDLYV+ES
Sbjct: 1711 T-----ELLTMTNALTMYMTQ-KIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYL 1764
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1765 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1821
>gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides]
Length = 2293
Score = 253 bits (647), Expect = 3e-65
Identities = 149/237 (62%), Positives = 168/237 (70%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVF NK L
Sbjct: 1616 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFL 1673
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D +D + + D +DID D I +LD
Sbjct: 1674 DDKPKGYLIDDIDIDD-----------------------SEDIDDSEDIDDSDDIDDDLD 1710
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
+ E T + + Y+ + +ID I LQFELA+ MSPCI+WIPNIHDLYV+ES
Sbjct: 1711 T-----ELLTMTNALTMYMTQ-KIDRFDITLQFELAKAMSPCIIWIPNIHDLYVNESNYL 1764
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1765 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1821
>gb|ADD30895.1| putative RF2 protein [Heuchera sanguinea] gi|340807140|gb|AEK71737.1|
hypothetical chloroplast RF2 [Heuchera sanguinea]
Length = 2290
Score = 253 bits (647), Expect = 3e-65
Identities = 152/237 (64%), Positives = 166/237 (70%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1613 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1670
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D +D D + DDID D I +LD
Sbjct: 1671 DNKPKGFLIDDIDIDD-----------------------SDDIDASDDIDDSDDIDRDLD 1707
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1708 TELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYL 1763
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1764 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1820
>gb|ADD30883.1| putative RF2 protein [Ilex cornuta] gi|340806994|gb|AEK71615.1|
hypothetical chloroplast RF2 [Ilex cornuta]
Length = 2297
Score = 253 bits (647), Expect = 3e-65
Identities = 150/239 (62%), Positives = 169/239 (70%), Gaps = 8/239 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1612 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1669
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D +D D + D DDID D+I ++ D
Sbjct: 1670 DNKPKGFLIDDIDIDD-----------------------SDDIDDSDDIDASDNIDASDD 1706
Query: 351 SDPELREEYTADDEILRYIIEL--EIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE 524
D +L E + +++ EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1707 IDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESN 1766
Query: 525 --SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+N+LS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1767 YLSLGLLVNHLSRDCERYSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1825
>gb|ABQ14840.1| Ycf2 [Heuchera micrantha]
Length = 2290
Score = 253 bits (647), Expect = 3e-65
Identities = 152/237 (64%), Positives = 166/237 (70%), Gaps = 6/237 (2%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1613 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1670
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVDDIDGRDSIYSNLD 350
D K +IDD+D +D D + DDID D I +LD
Sbjct: 1671 DNKPKGFLIDDIDIDD-----------------------SDDIDASDDIDDSDDIDRDLD 1707
Query: 351 SDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDESE-- 524
++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1708 TELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYL 1763
Query: 525 SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1764 SLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1820
>ref|YP_567121.1| Ycf2 [Vitis vinifera] gi|91984056|ref|YP_567140.1| Ycf2 [Vitis
vinifera] gi|122246606|sp|Q0ZIV6.1|YCF2_VITVI RecName:
Full=Protein Ycf2 gi|91701693|gb|ABE47577.1| hypothetical
chloroplast RF2 [Vitis vinifera]
gi|91701714|gb|ABE47598.1| hypothetical chloroplast RF2
[Vitis vinifera] gi|550533693|dbj|BAO01537.1| Ycf2
(chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533710|dbj|BAO01554.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533779|dbj|BAO01621.1|
Ycf2 (chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533796|dbj|BAO01638.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533864|dbj|BAO01705.1|
Ycf2 (chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533881|dbj|BAO01722.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica]
Length = 2300
Score = 253 bits (647), Expect = 3e-65
Identities = 153/240 (63%), Positives = 169/240 (70%), Gaps = 9/240 (3%)
Frame = +3
Query: 3 NSFHFPSHGKPKPFSFRLALSPSRGILVIGPIGTGRSYLVKSLATNSYLPFITVFLNK-L 179
NSFHFPSHGKP FS RLALSPSRGILVIG IGTGRSYLVK LATNSY+PFITVFLNK L
Sbjct: 1615 NSFHFPSHGKP--FSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFL 1672
Query: 180 DFK---IVIDDLDPEDYMEALXXXXXXXXXXXXXXXXXYMDALKDVD---DIDGRDSIYS 341
D K + DD+D +D + +DA D+D DID D I
Sbjct: 1673 DNKPKGFLFDDIDIDDSDD--------------------IDASDDIDASDDIDASDDIDR 1712
Query: 342 NLDSDPELREEYTADDEILRYIIELEIDLASINLQFELARTMSPCIVWIPNIHDLYVDES 521
+LD++ EL A L + EID I LQFELA+ MSPCI+WIPNIHDL V+ES
Sbjct: 1713 DLDTELELLTMMNA----LTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNES 1768
Query: 522 E--SLGLLLNYLSGDCERRSTRDILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 695
SLGLL+NYLS DCER STR+ILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ
Sbjct: 1769 NYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQ 1828