BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024148
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...    66   4e-09
emb|CBI21835.3| unnamed protein product [Vitis vinifera]               66   4e-09
ref|XP_002522626.1| transcription initiation factor tfiid, putat...    56   6e-06

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 48/121 (39%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
 Frame = -2

Query: 384  SEANSDLDSFAGXXXXXXXXXXXXXXXXXXXEFKNEKSDAVRGLKMRRHSSQAQVXXXXX 205
            SEANSDLDSFAG                   E K++++D VRGLKMRR  SQAQ      
Sbjct: 1369 SEANSDLDSFAGDLENLLDAEECEDGEEGNCESKHDRTDGVRGLKMRRRPSQAQAEEEIE 1428

Query: 204  XXXXXXXELRRLLMDDDAIERXXXXXXXXXXXKFG-PQGSVLNHGFQSAE-LNKKKVLVK 31
                   EL R+LMDDD  ER           + G   GS LN GF++ + + K   +VK
Sbjct: 1429 DEAAEAAELCRMLMDDDEAERKKKKKTRPVGEEEGLALGSQLNFGFENGQKMKKNSAVVK 1488

Query: 30   Q 28
            Q
Sbjct: 1489 Q 1489


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 48/121 (39%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
 Frame = -2

Query: 384  SEANSDLDSFAGXXXXXXXXXXXXXXXXXXXEFKNEKSDAVRGLKMRRHSSQAQVXXXXX 205
            SEANSDLDSFAG                   E K++++D VRGLKMRR  SQAQ      
Sbjct: 1099 SEANSDLDSFAGDLENLLDAEECEDGEEGNCESKHDRTDGVRGLKMRRRPSQAQAEEEIE 1158

Query: 204  XXXXXXXELRRLLMDDDAIERXXXXXXXXXXXKFG-PQGSVLNHGFQSAE-LNKKKVLVK 31
                   EL R+LMDDD  ER           + G   GS LN GF++ + + K   +VK
Sbjct: 1159 DEAAEAAELCRMLMDDDEAERKKKKKTRPVGEEEGLALGSQLNFGFENGQKMKKNSAVVK 1218

Query: 30   Q 28
            Q
Sbjct: 1219 Q 1219


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223538102|gb|EEF39713.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/81 (44%), Positives = 41/81 (50%)
 Frame = -2

Query: 384  SEANSDLDSFAGXXXXXXXXXXXXXXXXXXXEFKNEKSDAVRGLKMRRHSSQAQVXXXXX 205
            SEANSDLDSFAG                     K +K+D V+G+KMRRH SQAQ      
Sbjct: 1198 SEANSDLDSFAGDLENLLDAEECEGDESNYES-KQDKADGVKGIKMRRHPSQAQAEEEIE 1256

Query: 204  XXXXXXXELRRLLMDDDAIER 142
                   EL RLLMDDD  E+
Sbjct: 1257 DEAAEAAELCRLLMDDDEAEQ 1277