BLASTX nr result

ID: Rheum21_contig00024117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00024117
         (213 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    65   1e-08
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                64   2e-08
gb|AAT38756.2| Putative methyltransferase family protein [Solanu...    61   1e-07
ref|WP_008409321.1| hypothetical protein [Bacillus isronensis] g...    56   6e-06
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g...    55   7e-06
emb|CBL94165.1| putative reverse transcriptase family member [Ma...    55   1e-05

>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/58 (56%), Positives = 37/58 (63%)
 Frame = +3

Query: 3   RLRWFGHVQRSQPDAPVRRCEGLLFSEFXXXXXXPKKS*KEVIKHDLTLLTLTEDMAL 176
           RLRWFGHV+R   DAPVRRCEGL+          PKK   EVI+ DL  L +TEDM L
Sbjct: 208 RLRWFGHVRRRCADAPVRRCEGLVVEGTRRGRGRPKKYWGEVIRQDLAQLHITEDMTL 265


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/58 (53%), Positives = 38/58 (65%)
 Frame = +3

Query: 3   RLRWFGHVQRSQPDAPVRRCEGLLFSEFXXXXXXPKKS*KEVIKHDLTLLTLTEDMAL 176
           RLRWFGHV+R   DAPVRRCE ++          PKK  +EVI+ DL +L +TEDM L
Sbjct: 621 RLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTL 678


>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/58 (51%), Positives = 37/58 (63%)
 Frame = +3

Query: 3   RLRWFGHVQRSQPDAPVRRCEGLLFSEFXXXXXXPKKS*KEVIKHDLTLLTLTEDMAL 176
           RLRWFGHV+R   DA VRRCE ++          PKK  +EVI+ DL +L +TEDM L
Sbjct: 38  RLRWFGHVKRRSADAAVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTL 95


>ref|WP_008409321.1| hypothetical protein [Bacillus isronensis]
           gi|405383715|gb|EKB43273.1| hypothetical protein
           B857_03969 [Bacillus isronensis B3W22]
          Length = 109

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = +3

Query: 3   RLRWFGHVQRSQPDAPVRRCEGLLFSEFXXXXXXPKKS*KEVIKHDLTLLTLTEDM 170
           RLRWFGHVQR   DAP+RRC+     +       P+K+ +E ++ DL  L LTEDM
Sbjct: 36  RLRWFGHVQRMPTDAPIRRCDYGTEVQGRRGRGRPRKTLEETLRKDLEYLDLTEDM 91


>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
           gi|405551390|gb|EKB47241.1| hypothetical protein
           B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = +3

Query: 3   RLRWFGHVQRSQPDAPVRRCEGLLFSEFXXXXXXPKKS*KEVIKHDLTLLTLTEDM 170
           RLRWFGHVQR   DAPVRRC+             P+K+ +E ++ DL  L LTEDM
Sbjct: 60  RLRWFGHVQRRPTDAPVRRCDYGTEVRGRRGRGRPRKTLEETLRKDLEYLDLTEDM 115


>emb|CBL94165.1| putative reverse transcriptase family member [Malus domestica]
          Length = 163

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/56 (50%), Positives = 33/56 (58%)
 Frame = +3

Query: 3   RLRWFGHVQRSQPDAPVRRCEGLLFSEFXXXXXXPKKS*KEVIKHDLTLLTLTEDM 170
           RLRWFGHVQR   DAPVRRC              P+K+ +E ++ DL  L LTEDM
Sbjct: 91  RLRWFGHVQRMPTDAPVRRCNYETEVRGRRGRGRPRKTLEETLRKDLEYLDLTEDM 146


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