BLASTX nr result

ID: Rheum21_contig00023497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023497
         (263 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347515.1| PREDICTED: uncharacterized protein LOC102588...    64   3e-08
gb|EOY23703.1| Plastid transcriptionally active 15 [Theobroma ca...    62   8e-08
ref|XP_004235022.1| PREDICTED: uncharacterized protein LOC101249...    62   8e-08
ref|XP_002515871.1| conserved hypothetical protein [Ricinus comm...    58   2e-06
ref|XP_002321365.1| mitochondrial transcription termination fact...    56   6e-06
ref|XP_006280352.1| hypothetical protein CARUB_v10026279mg [Caps...    55   7e-06
ref|XP_006280351.1| hypothetical protein CARUB_v10026279mg [Caps...    55   7e-06
ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853...    55   1e-05
emb|CBI23085.3| unnamed protein product [Vitis vinifera]               55   1e-05

>ref|XP_006347515.1| PREDICTED: uncharacterized protein LOC102588461 [Solanum tuberosum]
          Length = 518

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +2

Query: 53  LVYCNGDS-NSAQSTLGIDCFGAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRI 229
           L+ CN  + N++ +   +D    +F LFRE+G +E DT+ LL+ +P++  + FESIR+RI
Sbjct: 63  LLKCNALAINNSSTNSFVDSGVMLFSLFREIGFNETDTEALLDAHPAINLTPFESIRTRI 122

Query: 230 HSLQSLGLNG 259
           HSLQSLG++G
Sbjct: 123 HSLQSLGVSG 132


>gb|EOY23703.1| Plastid transcriptionally active 15 [Theobroma cacao]
          Length = 515

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/50 (52%), Positives = 42/50 (84%)
 Frame = +2

Query: 113 GAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSLQSLGLNGF 262
           G +F LFRE+G++E +T LLL+ NP+L+++S + IR+R+ +LQS+G+NGF
Sbjct: 93  GMLFSLFREIGLNENETDLLLDKNPTLRSTSLDKIRARLLALQSVGINGF 142


>ref|XP_004235022.1| PREDICTED: uncharacterized protein LOC101249713 [Solanum
           lycopersicum]
          Length = 514

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +2

Query: 53  LVYCNGDS-NSAQSTLGIDCFGAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRI 229
           L+ CN  + N + +   +D    +F LFRE+G +E DT+ LL+ +P +  + FESIR+RI
Sbjct: 59  LLKCNALAINDSSTNSFVDSGVMLFSLFREIGFNETDTEALLDAHPVISLTPFESIRTRI 118

Query: 230 HSLQSLGLNG 259
           HSLQSLG++G
Sbjct: 119 HSLQSLGVSG 128


>ref|XP_002515871.1| conserved hypothetical protein [Ricinus communis]
           gi|223545026|gb|EEF46540.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 454

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
 Frame = +2

Query: 74  SNSAQSTLGIDCF-----GAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSL 238
           S ++ + +G + F     G ++  FRE G++E++T+ +LE NPSL  ++F+SIRSR+  L
Sbjct: 12  STTSSNAVGYNMFVLCVPGFLYSFFREFGLNEKETEFILEQNPSLTLTAFDSIRSRVFLL 71

Query: 239 QSLGLNG 259
           +S+GL G
Sbjct: 72  ESVGLKG 78


>ref|XP_002321365.1| mitochondrial transcription termination factor-related family
           protein [Populus trichocarpa]
           gi|222868361|gb|EEF05492.1| mitochondrial transcription
           termination factor-related family protein [Populus
           trichocarpa]
          Length = 517

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 38/50 (76%)
 Frame = +2

Query: 110 FGAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSLQSLGLNG 259
           FG ++  F E+G +E++T LLLE NP+LK++SF+SIR  +  L+S+G+ G
Sbjct: 84  FGLIYSFFAEMGFNEKETGLLLEQNPALKSASFDSIRVHVLLLESVGIKG 133


>ref|XP_006280352.1| hypothetical protein CARUB_v10026279mg [Capsella rubella]
           gi|482549056|gb|EOA13250.1| hypothetical protein
           CARUB_v10026279mg [Capsella rubella]
          Length = 498

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/49 (46%), Positives = 39/49 (79%)
 Frame = +2

Query: 116 AVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSLQSLGLNGF 262
           ++F LFR++G SEE+T+++L  NP +K++  ++I +R+ SLQSL +NGF
Sbjct: 78  SLFSLFRDIGFSEEETEMILAKNPDIKSAPLDTIGARVASLQSLKINGF 126


>ref|XP_006280351.1| hypothetical protein CARUB_v10026279mg [Capsella rubella]
           gi|482549055|gb|EOA13249.1| hypothetical protein
           CARUB_v10026279mg [Capsella rubella]
          Length = 469

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/49 (46%), Positives = 39/49 (79%)
 Frame = +2

Query: 116 AVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSLQSLGLNGF 262
           ++F LFR++G SEE+T+++L  NP +K++  ++I +R+ SLQSL +NGF
Sbjct: 78  SLFSLFRDIGFSEEETEMILAKNPDIKSAPLDTIGARVASLQSLKINGF 126


>ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853133 [Vitis vinifera]
          Length = 985

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/49 (46%), Positives = 37/49 (75%)
 Frame = +2

Query: 113 GAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSLQSLGLNG 259
           G++F LF+ LG+ E + +LLL  NP+L+ +SF+ +  R+ SL+SLG+NG
Sbjct: 555 GSLFSLFQGLGVDEREVELLLNKNPALRLASFDCVHERVCSLESLGING 603


>emb|CBI23085.3| unnamed protein product [Vitis vinifera]
          Length = 1884

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/49 (46%), Positives = 37/49 (75%)
 Frame = +2

Query: 113 GAVFLLFRELGISEEDTQLLLEDNPSLKTSSFESIRSRIHSLQSLGLNG 259
           G++F LF+ LG+ E + +LLL  NP+L+ +SF+ +  R+ SL+SLG+NG
Sbjct: 88  GSLFSLFQGLGVDEREVELLLNKNPALRLASFDCVHERVCSLESLGING 136


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