BLASTX nr result

ID: Rheum21_contig00023400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023400
         (494 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309906.1| PREDICTED: putative F-box protein At1g12855-...    57   2e-06
ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   2e-06
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   2e-06
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
gb|EMJ23971.1| hypothetical protein PRUPE_ppa006558mg [Prunus pe...    57   3e-06

>ref|XP_004309906.1| PREDICTED: putative F-box protein At1g12855-like isoform 1
           [Fragaria vesca subsp. vesca]
          Length = 419

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
 Frame = -2

Query: 280 LAEDCTSCIFLWLPIDDLQRSSCVCKSWSSIITDQAFIEEHLHQADSGLLCL-------- 125
           L +DC S I + LP++ LQRSS VCK W S+I +  FI+ HL +++S L+ L        
Sbjct: 41  LPKDCISSILVRLPVESLQRSSFVCKPWYSMIKNPKFIDAHLKRSESVLIFLLPIRKGRP 100

Query: 124 -SSNDANAHSGQAKNTLSVESLVQKQN 47
            SS+ A+A   +  NT SVES +   N
Sbjct: 101 YSSSMASAPE-ENPNTFSVESKLLPSN 126


>ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
           sativus]
          Length = 390

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
 Frame = -2

Query: 274 EDCTSCIFLWLPIDDLQRSSCVCKSWSSIITDQAFIEEHLHQADSGLLCLSS-------- 119
           EDC S I + LP+D L RS  VCK W +II    F+E H H+++S L+  +         
Sbjct: 30  EDCVSNILIRLPLDSLHRSMFVCKHWFNIICSPTFVETHFHRSESVLIFTAPTRYEETSH 89

Query: 118 --NDANAHSGQAKNTLSVESLVQKQNGSI 38
               +  HSG++ NTLS+E+   + + S+
Sbjct: 90  HLTPSLPHSGKS-NTLSIEAKYMQSSESL 117


>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
           sativus]
          Length = 401

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
 Frame = -2

Query: 274 EDCTSCIFLWLPIDDLQRSSCVCKSWSSIITDQAFIEEHLHQADSGLLCLSS-------- 119
           EDC S I + LP+D L RS  VCK W +II    F+E H H+++S L+  +         
Sbjct: 30  EDCVSNILIRLPLDSLHRSMFVCKHWFNIICSPTFVETHFHRSESVLIFTAPTRYEETSH 89

Query: 118 --NDANAHSGQAKNTLSVESLVQKQNGSI 38
               +  HSG++ NTLS+E+   + + S+
Sbjct: 90  HLTPSLPHSGKS-NTLSIEAKYMQSSESL 117


>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
           gi|223538985|gb|EEF40582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
 Frame = -2

Query: 274 EDCTSCIFLWLPIDDLQRSSCVCKSWSSIITDQAFIEEHLHQADSGLLCLSSNDANAHSG 95
           +DC S I + LP+  LQ S  VCK W SII    FI+ HL +++S L+ +       +S 
Sbjct: 39  KDCISNILIRLPLQSLQSSRFVCKLWYSIINSSIFIDAHLRRSESVLIYVKPVPNKRYSA 98

Query: 94  QAK-----NTLSVE-SLVQKQNGSIFQQ 29
            +K     N  SVE S +Q  +GSIF +
Sbjct: 99  TSKPPEESNNFSVEASFLQSNSGSIFAE 126


>gb|EMJ23971.1| hypothetical protein PRUPE_ppa006558mg [Prunus persica]
          Length = 406

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = -2

Query: 280 LAEDCTSCIFLWLPIDDLQRSSCVCKSWSSIITDQAFIEEHLHQADSGLLCLS 122
           L +DC S I + LP+D LQRS  VCK W +II +  FI+ HLH+++S L+ LS
Sbjct: 40  LHKDCISNILVRLPLDSLQRSRFVCKPWYNIIKNPKFIDAHLHRSESVLIFLS 92


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