BLASTX nr result

ID: Rheum21_contig00023296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023296
         (878 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289058.1| PREDICTED: uncharacterized protein LOC101312...    60   1e-06

>ref|XP_004289058.1| PREDICTED: uncharacterized protein LOC101312678 [Fragaria vesca
           subsp. vesca]
          Length = 715

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
 Frame = +2

Query: 68  YLMEYKSDLYVVCRFYDVGKVNPNCIPPAEDDST-DEDNTSNEDGGSKEIALEVKIFK-- 238
           +L+E   +LYVV ++Y+   V        EDD+   E + S  D      A++ K++K  
Sbjct: 559 HLVESYGELYVVDQYYERVSVRHG----REDDNIFGEYHNSRYDSD----AIDFKVYKLD 610

Query: 239 -KCNSWEYIKCLGDEVFLCCKDVSLGLSTKDFSGCKGNCVYF 361
            + + W+ +K LGD VF+  KD S  +STK+F G KGNC++F
Sbjct: 611 QEWSKWDNVKNLGDHVFVLSKDGSFCVSTKEFDGVKGNCIFF 652



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
 Frame = +2

Query: 14  LEVTPLPPLPVDSNKYDFYLMEYKSDLYVVCRFYD--VGKVNPNCIPPAEDDSTDEDNTS 187
           LEV    P P+  +    +L+E   DLYVV +++     + N   + P ++D   E    
Sbjct: 183 LEVIQFAP-PICGSDGQKHLVESCGDLYVVVKYFAEVAPQGNRTFMYPHQEDEDAE---- 237

Query: 188 NEDGGSKEIALEVKIFK---KCNSWEYIKCLGDEVFLCCKDVSLGLSTKDFSGCKGNCVY 358
                    A++ K++K   +   W  +K LGD VF+   D S  +ST++F+G KGNC++
Sbjct: 238 ---------AIDFKVYKLDQEWGKWVDVKDLGDRVFVLSNDGSFSVSTREFAGVKGNCIF 288

Query: 359 FSPEKLVPCCHRG--KKIEYGVHDLDEGRTSVMKMAKDRSLACRPCPE 496
           F  + +      G  K+    V  L++G        K R+LA   C +
Sbjct: 289 FIDQVVSQLGFSGITKRCYSCVFSLEDG--------KIRNLASSQCSQ 328


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