BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023254
         (791 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   197   5e-48
ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-44
gb|EOY31361.1| Pentatricopeptide repeat-containing protein isofo...   162   1e-37
gb|EOY31360.1| Pentatricopeptide repeat-containing protein isofo...   162   1e-37
gb|EPS68390.1| hypothetical protein M569_06384 [Genlisea aurea]       138   2e-30
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   115   2e-23
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   114   3e-23
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p...   114   5e-23
gb|EMJ26062.1| hypothetical protein PRUPE_ppa022809mg [Prunus pe...   112   1e-22
ref|XP_006375855.1| pentatricopeptide repeat-containing family p...   112   1e-22
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi...   111   3e-22
gb|ESW08862.1| hypothetical protein PHAVU_009G080600g [Phaseolus...   111   3e-22
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps...   110   4e-22
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...   110   6e-22
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   110   6e-22
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]     110   7e-22
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu...   110   7e-22
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi...   109   1e-21
ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containi...   109   1e-21
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar...   109   1e-21

>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  197 bits (500), Expect = 5e-48
 Identities = 98/214 (45%), Positives = 141/214 (65%)
 Frame = +2

Query: 8    IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
            + LNVVS TCL++YF  +G+I+EC +LL+ M+ NG++P+  T N+++  +CK   L    
Sbjct: 499  VKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGT-- 556

Query: 188  AQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNN 367
            A +I   FRN G  P+TT+YNIL+ A++R   D+L  + + +MY   +KPD VTYG    
Sbjct: 557  AHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIK 616

Query: 368  TLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEP 547
             LCK GKIS A +  + +L +G++P V+IYN  L+AM +RGK  D++ LLK M   GCEP
Sbjct: 617  GLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEP 676

Query: 548  NIASAEIIHRAISKGRMKCFPKAKELLEFARCGN 649
            N  S EI+ +A+SK  MK FP+  + LEF  CGN
Sbjct: 677  NAVSIEILKQAMSKCWMKRFPEVSKQLEFVICGN 710



 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
 Frame = +2

Query: 5   DIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVD 184
           D+ +  + F CL +      +  E   LLQ M+  G+ P+  + N I++  C++    +D
Sbjct: 397 DVAVYNIYFHCLCRE----NKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCREN--HID 450

Query: 185 QAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILN 364
           +A ++   F      PD  ++N +L AA +    ++    +  M  +GVK ++V+   L 
Sbjct: 451 EALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLI 510

Query: 365 NTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCE 544
              C +GKIS+  E L  ++ NG++P V  +N  L  + + G +G    + +   + G  
Sbjct: 511 QYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYF 570

Query: 545 PNIASAEI-IHRAISKG 592
           PN  S  I IH +I +G
Sbjct: 571 PNTTSYNILIHASIREG 587



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 47/191 (24%), Positives = 82/191 (42%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV+++T ++K+    G+I +   +L  M   G  P   T NVI+  +  +   +  +  +
Sbjct: 292 NVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQD--RYVEIGE 349

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L       + PD+ TY  L    L+     +A++ +L +   G   D+  Y I  + LC
Sbjct: 350 LLQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLC 409

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           +  K  +A   L  ++  G+ P    YN  L+   R   I + L L  H       P++ 
Sbjct: 410 RENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVV 469

Query: 557 SAEIIHRAISK 589
           S   I  A  K
Sbjct: 470 SFNTILSAACK 480



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 3/189 (1%)
 Frame = +2

Query: 26  SFTCLMKYFSL---VGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           SFT L+K       +G + +   + ++ML     P+  TLN++I  + K    +  +A  
Sbjct: 152 SFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAR--EAHF 209

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +       G L    +YN +L A  +      A   +  + + G   +  +Y  L     
Sbjct: 210 VFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFS 269

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K G   +AF  L+ +  +G  P V  Y   +  +   G+IGD L +L  M   GC+P+I 
Sbjct: 270 KEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIV 329

Query: 557 SAEIIHRAI 583
           +  +I R +
Sbjct: 330 TYNVILREL 338



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 44/184 (23%), Positives = 79/184 (42%)
 Frame = +2

Query: 11  DLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQA 190
           D ++V++  +++      +  E  +LLQ +    ISP + T   +   + K+  ++V  A
Sbjct: 325 DPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVRV--A 382

Query: 191 QKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNT 370
            K+L    + G   D   YNI      R      A   +  M  +G+ P  V+Y  + N 
Sbjct: 383 NKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNG 442

Query: 371 LCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
            C+   I +A +  +       SP V  +N  LSA  ++G    +  +L  M   G + N
Sbjct: 443 FCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLN 502

Query: 551 IASA 562
           + S+
Sbjct: 503 VVSS 506


>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
            mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  186 bits (471), Expect = 1e-44
 Identities = 93/206 (45%), Positives = 136/206 (66%)
 Frame = +2

Query: 8    IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
            + LNVVS TCL++YF  +G+I+EC +LL+ M+ NG++P+  T N+++  +CK   L    
Sbjct: 391  VKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGT-- 448

Query: 188  AQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNN 367
            A +I   FRN G  P+TT+YNIL+ A++R   D+L  + + +MY   +KPD VTYG    
Sbjct: 449  AHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIK 508

Query: 368  TLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEP 547
             LCK GKIS A +  + +L +G++P ++IYN  L+AM +RGK  D++ LLK M   GCEP
Sbjct: 509  GLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEP 568

Query: 548  NIASAEIIHRAISKGRMKCFPKAKEL 625
            N  S EI+ +A+SK  MK FP+  EL
Sbjct: 569  NAVSIEILKQAMSKCWMKRFPEFIEL 594



 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
 Frame = +2

Query: 5   DIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVD 184
           D+ +  + F CL +      +  E   LLQ M+  G+ P+  + N I++  C++    +D
Sbjct: 289 DVAVYNIYFHCLCRE----NKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCREN--HID 342

Query: 185 QAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILN 364
           +A ++   F      PD  ++N +L AA +    ++    +  M  +GVK ++V+   L 
Sbjct: 343 EALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLI 402

Query: 365 NTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCE 544
              C +GKIS+  E L  ++ NG++P V  +N  L  + + G +G    + +   + G  
Sbjct: 403 QYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYF 462

Query: 545 PNIASAEI-IHRAISKG 592
           PN  S  I IH +I +G
Sbjct: 463 PNTTSYNILIHASIREG 479



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 47/191 (24%), Positives = 82/191 (42%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV+++T ++K+    G+I +   +L  M   G  P   T NVI+  +  +   +  +  +
Sbjct: 184 NVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQD--RYVEIGE 241

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L       + PD+ TY  L    L+     +A++ +L +   G   D+  Y I  + LC
Sbjct: 242 LLQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLC 301

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           +  K  +A   L  ++  G+ P    YN  L+   R   I + L L  H       P++ 
Sbjct: 302 RENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVV 361

Query: 557 SAEIIHRAISK 589
           S   I  A  K
Sbjct: 362 SFNTILSAACK 372



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 3/189 (1%)
 Frame = +2

Query: 26  SFTCLMKYFSL---VGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           SFT L+K       +G + +   + ++ML     P+  TLN++I  + K    +  +A  
Sbjct: 44  SFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAR--EAHF 101

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +       G L    +YN +L A  +      A   +  + + G   +  +Y  L     
Sbjct: 102 VFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFS 161

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K G   +AF  L+ +  +G  P V  Y   +  +   G+IGD L +L  M   GC+P+I 
Sbjct: 162 KEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIV 221

Query: 557 SAEIIHRAI 583
           +  +I R +
Sbjct: 222 TYNVILREL 230



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 44/184 (23%), Positives = 79/184 (42%)
 Frame = +2

Query: 11  DLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQA 190
           D ++V++  +++      +  E  +LLQ +    ISP + T   +   + K+  ++V  A
Sbjct: 217 DPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRDQVRV--A 274

Query: 191 QKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNT 370
            K+L    + G   D   YNI      R      A   +  M  +G+ P  V+Y  + N 
Sbjct: 275 NKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNG 334

Query: 371 LCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
            C+   I +A +  +       SP V  +N  LSA  ++G    +  +L  M   G + N
Sbjct: 335 FCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLN 394

Query: 551 IASA 562
           + S+
Sbjct: 395 VVSS 398


>gb|EOY31361.1| Pentatricopeptide repeat-containing protein isoform 2 [Theobroma
            cacao]
          Length = 720

 Score =  162 bits (410), Expect = 1e-37
 Identities = 88/207 (42%), Positives = 123/207 (59%)
 Frame = +2

Query: 8    IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
            I L+V S TCL++YF  +G+ +EC KLL+ +++N  S      N+++HN+CK   L    
Sbjct: 500  IKLDVFSLTCLIQYFCTIGKFSECLKLLESIMHNDPSSIVIPFNILLHNLCKNWLLGT-- 557

Query: 188  AQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNN 367
            A +I    RN   LPD T+YNIL+ A +R     L  + + EM RQ +KPD   YG L +
Sbjct: 558  AYRIFKNLRNTKFLPDVTSYNILIHACIRDHNHLLVGQLLREMNRQKLKPDAFIYGSLIS 617

Query: 368  TLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEP 547
             LCK GKIS A +  N  L +G+ P V IYN  L A  +RG  GD+L LLK M   G +P
Sbjct: 618  GLCKEGKISVALQLWNQTLESGLIPSVLIYNTILQAKFQRGNFGDILSLLKVMIVEGFQP 677

Query: 548  NIASAEIIHRAISKGRMKCFPKAKELL 628
            + A+  I++ A+S G MK FPK  ++L
Sbjct: 678  DEATLGILNEAVSNGWMKRFPKVAKVL 704



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 56/205 (27%), Positives = 96/205 (46%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV S+T L+  FS  G   + ++ L +M  +   P+  T  +II  +      K +QA  
Sbjct: 258 NVCSYTALIYGFSREGLQEDVFQCLDFMQRDWCKPNVITYTIIIKFLFDNG--KFEQAMD 315

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            +++    G   D  TYN++L+        A   E++  M ++G+ PD  +Y  L   L 
Sbjct: 316 FVSKMEAEGCDADLVTYNVVLRELCHRGRVADISEFIQVMNQKGLSPDSYSYAALAGGLL 375

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K+GK+  A E L  +++ G +   ++YN +   + +  +  + L LLK M   G +PN  
Sbjct: 376 KIGKVGFACELLLDVISKGCTLDAAVYNIYFRCLCQVNRSREALSLLKSMMEAGFKPNNV 435

Query: 557 SAEIIHRAISKGRMKCFPKAKELLE 631
           S   I     + R     +A ELL+
Sbjct: 436 SYNTILSGFCRERN--INEALELLD 458



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 44/185 (23%), Positives = 77/185 (41%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV+++T ++K+    G+  +    +  M   G      T NV++  +C +   +V    +
Sbjct: 293 NVITYTIIIKFLFDNGKFEQAMDFVSKMEAEGCDADLVTYNVVLRELCHRG--RVADISE 350

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            +      G+ PD+ +Y  L    L+      A E +L++  +G   D   Y I    LC
Sbjct: 351 FIQVMNQKGLSPDSYSYAALAGGLLKIGKVGFACELLLDVISKGCTLDAAVYNIYFRCLC 410

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           ++ +  +A   L  ++  G  P    YN  LS   R   I + L LL H       P++ 
Sbjct: 411 QVNRSREALSLLKSMMEAGFKPNNVSYNTILSGFCRERNINEALELLDHFEWDANGPDVV 470

Query: 557 SAEII 571
           S   I
Sbjct: 471 SFNTI 475


>gb|EOY31360.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
            cacao]
          Length = 761

 Score =  162 bits (410), Expect = 1e-37
 Identities = 88/207 (42%), Positives = 123/207 (59%)
 Frame = +2

Query: 8    IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
            I L+V S TCL++YF  +G+ +EC KLL+ +++N  S      N+++HN+CK   L    
Sbjct: 500  IKLDVFSLTCLIQYFCTIGKFSECLKLLESIMHNDPSSIVIPFNILLHNLCKNWLLGT-- 557

Query: 188  AQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNN 367
            A +I    RN   LPD T+YNIL+ A +R     L  + + EM RQ +KPD   YG L +
Sbjct: 558  AYRIFKNLRNTKFLPDVTSYNILIHACIRDHNHLLVGQLLREMNRQKLKPDAFIYGSLIS 617

Query: 368  TLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEP 547
             LCK GKIS A +  N  L +G+ P V IYN  L A  +RG  GD+L LLK M   G +P
Sbjct: 618  GLCKEGKISVALQLWNQTLESGLIPSVLIYNTILQAKFQRGNFGDILSLLKVMIVEGFQP 677

Query: 548  NIASAEIIHRAISKGRMKCFPKAKELL 628
            + A+  I++ A+S G MK FPK  ++L
Sbjct: 678  DEATLGILNEAVSNGWMKRFPKVAKVL 704



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 56/205 (27%), Positives = 96/205 (46%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV S+T L+  FS  G   + ++ L +M  +   P+  T  +II  +      K +QA  
Sbjct: 258 NVCSYTALIYGFSREGLQEDVFQCLDFMQRDWCKPNVITYTIIIKFLFDNG--KFEQAMD 315

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            +++    G   D  TYN++L+        A   E++  M ++G+ PD  +Y  L   L 
Sbjct: 316 FVSKMEAEGCDADLVTYNVVLRELCHRGRVADISEFIQVMNQKGLSPDSYSYAALAGGLL 375

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K+GK+  A E L  +++ G +   ++YN +   + +  +  + L LLK M   G +PN  
Sbjct: 376 KIGKVGFACELLLDVISKGCTLDAAVYNIYFRCLCQVNRSREALSLLKSMMEAGFKPNNV 435

Query: 557 SAEIIHRAISKGRMKCFPKAKELLE 631
           S   I     + R     +A ELL+
Sbjct: 436 SYNTILSGFCRERN--INEALELLD 458



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 44/185 (23%), Positives = 77/185 (41%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV+++T ++K+    G+  +    +  M   G      T NV++  +C +   +V    +
Sbjct: 293 NVITYTIIIKFLFDNGKFEQAMDFVSKMEAEGCDADLVTYNVVLRELCHRG--RVADISE 350

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            +      G+ PD+ +Y  L    L+      A E +L++  +G   D   Y I    LC
Sbjct: 351 FIQVMNQKGLSPDSYSYAALAGGLLKIGKVGFACELLLDVISKGCTLDAAVYNIYFRCLC 410

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           ++ +  +A   L  ++  G  P    YN  LS   R   I + L LL H       P++ 
Sbjct: 411 QVNRSREALSLLKSMMEAGFKPNNVSYNTILSGFCRERNINEALELLDHFEWDANGPDVV 470

Query: 557 SAEII 571
           S   I
Sbjct: 471 SFNTI 475


>gb|EPS68390.1| hypothetical protein M569_06384 [Genlisea aurea]
          Length = 724

 Score =  138 bits (348), Expect = 2e-30
 Identities = 81/224 (36%), Positives = 125/224 (55%), Gaps = 2/224 (0%)
 Frame = +2

Query: 8    IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
            I  +VV  TC+ +Y+  VG ++EC KL+  M+  G  P++ TLN ++  +C+ + L +  
Sbjct: 501  IGFDVVGATCMARYYFAVGNVSECLKLVDSMVAYGPHPNSVTLNTVLAGLCRIRQLGL-- 558

Query: 188  AQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNN 367
            A +I  R +  GV P+  +Y IL++AA+R     L  +   EM  +G++ D+  YG    
Sbjct: 559  AMQIFDRLKAAGVPPNAASYAILMRAAVRDEDVRLLDQLFGEMRSRGIEADVRVYGCFVY 618

Query: 368  TLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEP 547
             LC+ GK+S A +  + L  NGVSP VSIYN  L AM+ R   GDV+ LLK MA  GC P
Sbjct: 619  GLCRKGKLSAALDLRDRLRENGVSPDVSIYNALLEAMVARRTFGDVVGLLKRMAIDGCLP 678

Query: 548  NIASAEIIHRAISKG--RMKCFPKAKELLEFARCGNDGHQQMQY 673
            N  S  I+ RA   G    + F +  +L++F   G+   + + +
Sbjct: 679  NEGSYRILRRARKNGWRSRRDFHRGVKLVQFLMFGHVSSETLNH 722


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  115 bits (287), Expect = 2e-23
 Identities = 62/190 (32%), Positives = 109/190 (57%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   + G I E  KLL+ ML  G+ P   T N II  +CK+    V++A ++
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG--MVERAAEL 264

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +T   + G  PD  +YNILL+A L         + V EM+ +G +P+ VTY IL ++LC+
Sbjct: 265 ITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 324

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            G+I +A   L +++   ++P    Y+  +SA+ + G++   + ++ +M S+GC P+I +
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384

Query: 560 AEIIHRAISK 589
              I  A+ K
Sbjct: 385 YNTILAALCK 394



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 52/188 (27%), Positives = 93/188 (49%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F     I +  ++++ +L +   P     N +I   CK    +++ A +
Sbjct: 102 DVILCTKLIKGFFNFKNIEKASRVME-ILESHTEPDVFAYNAVISGFCKVN--RIEAATQ 158

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L R +  G LPD  TYNI++ +    R   LA + + ++      P ++TY IL     
Sbjct: 159 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATI 218

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
             G I++A + L  +LA G+ P +  YN  +  M + G +     L+  + S GC+P++ 
Sbjct: 219 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVI 278

Query: 557 SAEIIHRA 580
           S  I+ RA
Sbjct: 279 SYNILLRA 286



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 50/183 (27%), Positives = 87/183 (47%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           +++  +  S+  L+      G++     ++ YM++NG  P     N I+  +CK      
Sbjct: 341 KELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG--NA 398

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           +QA +I  + R MG  P+ ++YN ++ A       + A   V  M  +GV PD +TY  L
Sbjct: 399 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSL 458

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + LC+ G + +A   L+ +  +G  P V  YN  L  + +  +I D + +   M   GC
Sbjct: 459 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC 518

Query: 542 EPN 550
            PN
Sbjct: 519 RPN 521



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 53/178 (29%), Positives = 87/178 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+S+  L++ F   G+  E  KL+  M + G  P+  T +++I ++C+    ++D+A  
Sbjct: 276 DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG--RIDEAIS 333

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L       + PDT +Y+ L+ A  +     LA   +  M   G  PD+V Y  +   LC
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 393

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           K G  + A E  N L   G  P VS YN  +SA+   G     L ++  M S G +P+
Sbjct: 394 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD 451



 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 51/198 (25%), Positives = 93/198 (46%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + N V+++ L+      G+I E   +L+ M+   ++P T + + +I  +CK+   ++
Sbjct: 306 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG--RL 363

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A  I+    + G LPD   YN +L A  +      A E   ++   G  P++ +Y  +
Sbjct: 364 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 423

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + L   G  S A   +  +++ GV P    YN+ +S + R G + + + LL  M   G 
Sbjct: 424 ISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 483

Query: 542 EPNIASAEIIHRAISKGR 595
            P + S  I+   + K R
Sbjct: 484 RPTVISYNIVLLGLCKVR 501



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCK-KQPLKVDQAQKILTRFRNMGVLPDT 238
           G+  E    L+ ++N G +P       +I      K   K  +  +IL         PD 
Sbjct: 82  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTE----PDV 137

Query: 239 TTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNM 418
             YN ++    +      A + +  M  +G  PD+VTY I+  +LC   K+  A + L+ 
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 419 LLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           LL +   P V  Y   + A +  G I + + LL+ M + G  P++ +   I R + K  M
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 599 KCFPKAKELL 628
               +A EL+
Sbjct: 258 --VERAAELI 265


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  114 bits (286), Expect = 3e-23
 Identities = 62/190 (32%), Positives = 109/190 (57%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   + G I E  KLL+ ML  G+ P   T N II  +CK+    V++A ++
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG--MVERAAEL 274

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +T   + G  PD  +YNILL+A L         + V EM+ +G +P+ VTY IL ++LC+
Sbjct: 275 ITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            G+I +A   L +++   ++P    Y+  +SA+ + G++   + ++ +M S+GC P+I +
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394

Query: 560 AEIIHRAISK 589
              I  A+ K
Sbjct: 395 YNTILAALCK 404



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 53/188 (28%), Positives = 92/188 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F     I +  ++++ +L +   P     N +I   CK    +++ A +
Sbjct: 112 DVILCTKLIKGFFNFKNIEKASRVME-ILESHTEPDVFAYNAVISGFCKVN--QIEAATQ 168

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L R +  G LPD  TYNI++ +    R   LA   + ++      P ++TY IL     
Sbjct: 169 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATI 228

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
             G I++A + L  +LA G+ P +  YN  +  M + G +     L+  + S GCEP++ 
Sbjct: 229 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVI 288

Query: 557 SAEIIHRA 580
           S  I+ RA
Sbjct: 289 SYNILLRA 296



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 49/183 (26%), Positives = 87/183 (47%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           +++  +  S+  L+      G++     ++ YM++NG  P     N I+  +CK      
Sbjct: 351 KELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG--NA 408

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           +QA +I  + R MG  P+ ++YN ++ A       + A   V  M  +G+ PD +TY  L
Sbjct: 409 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSL 468

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + LC+ G + +A   L+ +  +G  P V  YN  L  + +  +I D + +   M   GC
Sbjct: 469 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC 528

Query: 542 EPN 550
            PN
Sbjct: 529 RPN 531



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 53/178 (29%), Positives = 87/178 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+S+  L++ F   G+  E  KL+  M + G  P+  T +++I ++C+    ++D+A  
Sbjct: 286 DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG--RIDEAIS 343

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L       + PDT +Y+ L+ A  +     LA   +  M   G  PD+V Y  +   LC
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 403

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           K G  + A E  N L   G  P VS YN  +SA+   G     L ++  M S G +P+
Sbjct: 404 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461



 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 50/198 (25%), Positives = 93/198 (46%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + N V+++ L+      G+I E   +L+ M+   ++P T + + +I  +CK+   ++
Sbjct: 316 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG--RL 373

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A  I+    + G LPD   YN +L A  +      A E   ++   G  P++ +Y  +
Sbjct: 374 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 433

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + L   G  S A   +  +++ G+ P    YN+ +S + R G + + + LL  M   G 
Sbjct: 434 ISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 493

Query: 542 EPNIASAEIIHRAISKGR 595
            P + S  I+   + K R
Sbjct: 494 RPTVISYNIVLLGLCKVR 511



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCK-KQPLKVDQAQKILTRFRNMGVLPDT 238
           G+  E    L+ ++N G +P       +I      K   K  +  +IL         PD 
Sbjct: 92  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTE----PDV 147

Query: 239 TTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNM 418
             YN ++    +      A + +  M  +G  PD+VTY I+  +LC   K+  A   L+ 
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207

Query: 419 LLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           LL +   P V  Y   + A +  G I + + LL+ M + G  P++ +   I R + K  M
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267

Query: 599 KCFPKAKELL 628
               +A EL+
Sbjct: 268 --VERAAELI 275


>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 586

 Score =  114 bits (284), Expect = 5e-23
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 5/208 (2%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+++T L++   L G+I E  KLL  ML+ G+ P   T N II  +CK     V++A K
Sbjct: 210 SVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGMCKDG--MVNRAFK 267

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            +   +  G  PD  +YNILL+  L     A   + V EM  +G +P++VTY IL ++LC
Sbjct: 268 FVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRGCEPNVVTYSILISSLC 327

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           + GK+ +A   L M+   G++P    Y+  +SA  + G++   +  L  M S GC P+I 
Sbjct: 328 REGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIV 387

Query: 557 SAEIIHRAISKG-----RMKCFPKAKEL 625
           +   +   + K       ++ F K +E+
Sbjct: 388 NYNTVLATLCKNGKAEQALEIFEKLREV 415



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 51/190 (26%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +VV  T ++K F     + +  ++++ +   G  P     N II   CK    ++D A K
Sbjct: 106 DVVLCTKMIKGFFNGRNVEKATRVIEILEKYG-EPDVFAYNAIISGFCKMN--RLDFANK 162

Query: 197 ILTRFRNMGVLPDTTTYNILLQA-ALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           +L R R+ G  PD  TYNI++ +   R ++D+ A++ + ++ +   KP ++TY IL    
Sbjct: 163 VLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDS-AYKVINQLLKDNCKPSVITYTILIEAT 221

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
              G+I++A + L+ +L+ G+ P +  YN  +  M + G +      ++ + + GC+P++
Sbjct: 222 MLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDV 281

Query: 554 ASAEIIHRAI 583
            S  I+ R +
Sbjct: 282 ISYNILLRVL 291



 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 50/183 (27%), Positives = 89/183 (48%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R +  +  S+  L+  F   G++    + L  M+++G  P     N ++  +CK    K 
Sbjct: 345 RGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNG--KA 402

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           +QA +I  + R +G  P+ ++YN +  A   +     A E + EM  + + PD +TY  L
Sbjct: 403 EQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSL 462

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + LC+ G + +A E L  +  +G+ P V  YN  L  + +  +I D + +L  M    C
Sbjct: 463 ISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRC 522

Query: 542 EPN 550
           +PN
Sbjct: 523 QPN 525



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 53/178 (29%), Positives = 88/178 (49%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+S+  L++     G+  E  KL+  M++ G  P+  T +++I ++C++   K+++A  
Sbjct: 280 DVISYNILLRVLLNQGKWAEGEKLVTEMVSRGCEPNVVTYSILISSLCREG--KLEEAVN 337

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L   +  G+ PD  +Y+ L+ A  +     LA E++  M   G  PD+V Y  +  TLC
Sbjct: 338 VLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLC 397

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           K GK   A E    L   G  P VS YN   SA+   G     L ++  M S    P+
Sbjct: 398 KNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPD 455



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 46/179 (25%), Positives = 82/179 (45%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRNMGVLPDTT 241
           G+  E +  L+ M+  G  P       +I      +   V++A +++      G  PD  
Sbjct: 86  GKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGR--NVEKATRVIEILEKYGE-PDVF 142

Query: 242 TYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNML 421
            YN ++    +      A++ +  M  +G  PD+VTY I+  + C  GK+  A++ +N L
Sbjct: 143 AYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDSAYKVINQL 202

Query: 422 LANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           L +   P V  Y   + A + +G+I + + LL  M S G  P++ +   I R + K  M
Sbjct: 203 LKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGMCKDGM 261



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 48/196 (24%), Positives = 90/196 (45%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + NVV+++ L+      G++ E   +L+ M   G++P   + + +I   CK+   ++
Sbjct: 310 RGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEG--RL 367

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A + L    + G LPD   YN +L    +      A E   ++   G  P++ +Y  +
Sbjct: 368 DLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTM 427

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + L   G    A E ++ +L+  + P    YN+ +S + R G + + + LL  M   G 
Sbjct: 428 FSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGI 487

Query: 542 EPNIASAEIIHRAISK 589
            P + S  I+   + K
Sbjct: 488 PPTVISYNIVLLGLCK 503


>gb|EMJ26062.1| hypothetical protein PRUPE_ppa022809mg [Prunus persica]
          Length = 544

 Score =  112 bits (281), Expect = 1e-22
 Identities = 57/130 (43%), Positives = 81/130 (62%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           N VS  CL++YF  V + ++C KLL YM  NG SP+  T NV++ ++CK   + +  AQ+
Sbjct: 394 NAVSLNCLIQYFCKVEKFSDCLKLLDYMTCNGSSPTIVTFNVLLGSLCKNGLVGI--AQQ 451

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +    RN G  PDTT+YNIL+ A +R     + ++ V  MY QG+KPD+ TYG L + LC
Sbjct: 452 VFKHLRNTGFFPDTTSYNILIHAFIREGNKVMVNQLVNYMYSQGLKPDLFTYGSLISGLC 511

Query: 377 KMGKISDAFE 406
           K GK S A +
Sbjct: 512 KEGKASVALK 521



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           N  S+T L+  F   G   +    L  M ++G  PS  T  +II  +C +   ++  A  
Sbjct: 149 NACSYTALIYGFGREGLWRDLLGCLNEMESDGCKPSVITYTIIIKFLCGEG--RIAGALD 206

Query: 197 ILTRFRNMGVLPDTTTYNILL-QAALRARVDALAHEYVLEMYR-QGVKPDMVTYGILNNT 370
            LT+    G  PD TTYN++L +  L+ RVD + H  +L+M   +G  P+  TY  L   
Sbjct: 207 FLTKMEREGCEPDMTTYNVILHELCLQDRVDEVVH--LLDMIENKGFSPNSYTYAALGGG 264

Query: 371 LCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           L K GKI  A E L  ++  G    V++YN +   +    +  + L LLK M   G  P+
Sbjct: 265 LLKTGKIGIACELLLGVITRGCYVDVAVYNIYFHCLCHENRSKEALYLLKKMMEEGLMPS 324

Query: 551 IASAEIIHRAISKGRMKCFPKAKELLEFARCGNDG 655
             S   I +     R     KA +LL+  +   +G
Sbjct: 325 NVSFNTILKGFC--RENNISKALKLLDCFKWDENG 357



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
 Frame = +2

Query: 74  ECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRNMGVLPDTTTYNI 253
           E   LL+ M+  G+ PS  + N I+   C++    + +A K+L  F+     PD  ++N 
Sbjct: 308 EALYLLKKMMEEGLMPSNVSFNTILKGFCREN--NISKALKLLDCFKWDENGPDVISFNT 365

Query: 254 LLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNMLLANG 433
           +L  A + +  ++    +  +   GV+P+ V+   L    CK+ K SD  + L+ +  NG
Sbjct: 366 ILSVACKQKKHSMIQRVLSRLKNGGVQPNAVSLNCLIQYFCKVEKFSDCLKLLDYMTCNG 425

Query: 434 VSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEI-IHRAISKG 592
            SP +  +N  L ++ + G +G    + KH+ + G  P+  S  I IH  I +G
Sbjct: 426 SSPTIVTFNVLLGSLCKNGLVGIAQQVFKHLRNTGFFPDTTSYNILIHAFIREG 479



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 50/177 (28%), Positives = 84/177 (47%)
 Frame = +2

Query: 23  VSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKIL 202
           VSF  ++K F     I++  KLL     +   P   + N I+   CK++  K    Q++L
Sbjct: 326 VSFNTILKGFCRENNISKALKLLDCFKWDENGPDVISFNTILSVACKQK--KHSMIQRVL 383

Query: 203 TRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKM 382
           +R +N GV P+  + N L+Q   +    +   + +  M   G  P +VT+ +L  +LCK 
Sbjct: 384 SRLKNGGVQPNAVSLNCLIQYFCKVEKFSDCLKLLDYMTCNGSSPTIVTFNVLLGSLCKN 443

Query: 383 GKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
           G +  A +    L   G  P  + YN  + A +R G    V  L+ +M S G +P++
Sbjct: 444 GLVGIAQQVFKHLRNTGFFPDTTSYNILIHAFIREGNKVMVNQLVNYMYSQGLKPDL 500



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 41/171 (23%), Positives = 75/171 (43%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           ++S  C  K  S++ ++      L  + N G+ P+  +LN +I   CK +  K     K+
Sbjct: 366 ILSVACKQKKHSMIQRV------LSRLKNGGVQPNAVSLNCLIQYFCKVE--KFSDCLKL 417

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           L      G  P   T+N+LL +  +  +  +A +    +   G  PD  +Y IL +   +
Sbjct: 418 LDYMTCNGSSPTIVTFNVLLGSLCKNGLVGIAQQVFKHLRNTGFFPDTTSYNILIHAFIR 477

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMAS 532
            G      + +N + + G+ P +  Y + +S + + GK    L L   M S
Sbjct: 478 EGNKVMVNQLVNYMYSQGLKPDLFTYGSLISGLCKEGKASVALKLRDEMRS 528



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
 Frame = +2

Query: 143 IIHNVCKKQPLKVDQAQKILTR--------FRNMGVLPDTTTYNILLQAALRARVDALAH 298
           I+HN C    L     ++ L R          + G  P   TY I+++        A A 
Sbjct: 146 IVHNACSYTALIYGFGREGLWRDLLGCLNEMESDGCKPSVITYTIIIKFLCGEGRIAGAL 205

Query: 299 EYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAM 478
           +++ +M R+G +PDM TY ++ + LC   ++ +    L+M+   G SP    Y      +
Sbjct: 206 DFLTKMEREGCEPDMTTYNVILHELCLQDRVDEVVHLLDMIENKGFSPNSYTYAALGGGL 265

Query: 479 LRRGKIGDVLLLLKHMASHGCEPNIA 556
           L+ GKIG    LL  + + GC  ++A
Sbjct: 266 LKTGKIGIACELLLGVITRGCYVDVA 291


>ref|XP_006375855.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550324943|gb|ERP53652.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 479

 Score =  112 bits (280), Expect = 1e-22
 Identities = 63/190 (33%), Positives = 106/190 (55%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           ++++T L++ + L G I E  KLL  ML+ G+ P T T NVI   +CK+   KVD+A + 
Sbjct: 115 LITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEG--KVDRAFEF 172

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +    + G  PD  TYNILL+A L         +++ E++ +G +P++VTY IL ++LC+
Sbjct: 173 VRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCR 232

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            GKI ++   + ++   G++P    Y+  ++A  R GK+   +  L  M   G  P+I +
Sbjct: 233 DGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVN 292

Query: 560 AEIIHRAISK 589
              I  A+ K
Sbjct: 293 YNTIMAALCK 302



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           +D   +V+  T L+K F     I +  +++  +  +G  P     N +I   CK    ++
Sbjct: 4   KDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKAN--RI 60

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAAL-RARVDALAHEYVLEMYRQGVKPDMVTYGI 358
           + A+ +L R +  G  PD  T+NI++     + ++D     +   +     KP ++TY I
Sbjct: 61  ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120

Query: 359 LNNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHG 538
           L       G I +A + L+ +L+ G+ P    YN     + + GK+      ++ + S G
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 539 CEPNIASAEIIHRAI 583
           C+P++ +  I+ RA+
Sbjct: 181 CKPDVITYNILLRAL 195



 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 45/171 (26%), Positives = 81/171 (47%)
 Frame = +2

Query: 38  LMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRN 217
           L+  F   G++    + L  M+ +G  P     N I+  +CK      D A +I  +   
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNG--NGDHAVEIFGKLDE 318

Query: 218 MGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISD 397
           +G  P+ ++YN +L A   +     A   + +M  +G+ PD++TY  L + LC+ G + +
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378

Query: 398 AFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           A   L  +L+    P +  Y   L  + +  +I D + +L  M  +GC+PN
Sbjct: 379 AIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPN 429



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 48/179 (26%), Positives = 86/179 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+++  L++     G+  E  K +  + + G  P+  T +++I ++C+    K++++  
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDG--KIEESVN 241

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           ++   +  G+ PD   Y+ L+ A  R     +A E++  M   G  PD+V Y  +   LC
Sbjct: 242 LVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALC 301

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
           K G    A E    L   G  P VS YN  LSA+   G     L ++  M S G +P++
Sbjct: 302 KNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDV 360



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 51/196 (26%), Positives = 92/196 (46%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + NVV+++ L+      G+I E   L++ M   G++P     + +I   C++   K+
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG--KL 271

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A + L      G LPD   YN ++ A  +      A E   ++   G  P++ +Y  +
Sbjct: 272 DMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTM 331

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + L   G    A   ++ +L+ G+ P V  YN+ +S + R G + + + LL  M S   
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391

Query: 542 EPNIASAEIIHRAISK 589
           +PNI S + +   + K
Sbjct: 392 QPNIVSYKTVLLGLCK 407


>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Solanum tuberosum]
          Length = 583

 Score =  111 bits (278), Expect = 3e-22
 Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 6/208 (2%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   L G I E  KLL  ML+ G+ P   T N II  +C+++ +  DQA + 
Sbjct: 202 VITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYTYNAIIRGMCREKMM--DQAYEF 259

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVL-EMYRQGVKPDMVTYGILNNTLC 376
           +    + G  PD  +YNILL+A L  +      E ++ EM   G +P++VTY IL + LC
Sbjct: 260 VRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEMLSAGCEPNVVTYSILMSALC 319

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           + GK+ +A   L +++  G++P    Y+  +SA  + G++   +  L +M S+GC P+I 
Sbjct: 320 RDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIV 379

Query: 557 SAE-IIHRAISKGR----MKCFPKAKEL 625
           +   I+     KG+    M+ F K  E+
Sbjct: 380 NYNTILSTMCKKGKADEAMEVFEKLAEI 407



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 55/171 (32%), Positives = 86/171 (50%)
 Frame = +2

Query: 38  LMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRN 217
           L+  F   G++    K L YM++NG  P     N I+  +CKK   K D+A ++  +   
Sbjct: 349 LISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKG--KADEAMEVFEKLAE 406

Query: 218 MGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISD 397
           +G  PD +TYN L+ A       A A + V EM  +GV PD +TY  L + LC+ G +++
Sbjct: 407 IGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNE 466

Query: 398 AFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           A + L  +  NG  P V  YN  L  + +  ++ + + +L  M   G  PN
Sbjct: 467 ALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPN 517



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
 Frame = +2

Query: 17  NVVSFTCLMK-YFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQ 193
           +V+S+  L++      G+ ++  KL+  ML+ G  P+  T ++++  +C+    K+D+A 
Sbjct: 271 DVISYNILLRALLHHKGKWSDGEKLMNEMLSAGCEPNVVTYSILMSALCRDG--KLDEAI 328

Query: 194 KILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
            +L    + G+ PDT TY+ L+ A  +     LA +++  M   G  PD+V Y  + +T+
Sbjct: 329 NLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTM 388

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
           CK GK  +A E    L   G  P VS YN  +SA+   G     L ++  M   G +P+ 
Sbjct: 389 CKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPD- 447

Query: 554 ASAEIIHRAI 583
              EI + A+
Sbjct: 448 ---EITYNAL 454



 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NVV+++ LM      G++ E   LL+ M++ G++P T T + +I   CK    ++D A K
Sbjct: 307 NVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGG--RLDLAIK 364

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            L    + G LPD   YN +L    +      A E   ++   G  PD+ TY  L + L 
Sbjct: 365 FLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALW 424

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
             G  + A + ++ ++  GV P    YN  +S + R G + + L LL  M  +G  P + 
Sbjct: 425 NNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVI 484

Query: 557 SAEIIHRAISKGR--MKCFPKAKELLEFARCGND 652
           +  I+   + K    ++      E++E  R  N+
Sbjct: 485 TYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNE 518



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F       +  K++Q +   G  P     N +I   CK    K+++A K
Sbjct: 96  DVILCTKLIKGFCNSKNSDKGVKVMQILEQFG-EPDVFAYNALISGFCKMN--KIEEANK 152

Query: 197 ILTRFRNMGVLPDTTTYNILLQAAL-RARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           +L R +  G  PD+ TYNIL+ +   R ++ +              KP ++TY IL    
Sbjct: 153 VLNRMKARGFPPDSVTYNILIGSLCDRGKLGSALKLLDQLKEENNCKPTVITYTILIEAT 212

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
              G I +A + L+ +L+ G+ P +  YN  +  M R   +      ++ + S GC+P++
Sbjct: 213 ILEGGIHEAMKLLDEMLSRGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDV 272

Query: 554 ASAEIIHRAISKGRMKCFPKAKELLEFARCG 646
            S  I+ RA+   + K     K + E    G
Sbjct: 273 ISYNILLRALLHHKGKWSDGEKLMNEMLSAG 303


>gb|ESW08862.1| hypothetical protein PHAVU_009G080600g [Phaseolus vulgaris]
          Length = 550

 Score =  111 bits (277), Expect = 3e-22
 Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +VVSFT L+  +S  G+  +  + L+ M+  G SP+  T N ++  +C     +VD+A+K
Sbjct: 266 DVVSFTTLIYGYSKRGEFKKAVECLKEMMERGCSPNVVTYNALVEGLCLSG--EVDEAKK 323

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +++R R  G+  +  T   LL+          A +++ EM  +G+KPD+  YG++ N  C
Sbjct: 324 MMSRMRLNGLKDNVATNTSLLKGLCIVGKSDEAFKHLREMVSRGMKPDVKAYGVVVNEYC 383

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K+GK  +A   L  ++  GV P VS +N     ++  GKI + +LLLK M+   C PN  
Sbjct: 384 KIGKPREAVSLLREMVTRGVKPSVSSFNAVFRVLVDEGKIDEGVLLLKQMSQMRCSPNFL 443

Query: 557 SAEIIHRAIS--KGRMK 601
           S  I+   +   KGRM+
Sbjct: 444 SYCILICGLCKVKGRMQ 460



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
           ++ +V + T +++ F  VG +    K+   M      P+  T N +IH  CK+  +  + 
Sbjct: 195 VEPDVYTHTTMIRGFCKVGMVASARKVFDEMR---CEPNMVTYNTLIHGFCKRGDM--EG 249

Query: 188 AQKILTRF-RNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILN 364
           A+ +  R   +    PD  ++  L+    +      A E + EM  +G  P++VTY  L 
Sbjct: 250 ARWVFDRMVESKSCEPDVVSFTTLIYGYSKRGEFKKAVECLKEMMERGCSPNVVTYNALV 309

Query: 365 NTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCE 544
             LC  G++ +A + ++ +  NG+   V+   + L  +   GK  +    L+ M S G +
Sbjct: 310 EGLCLSGEVDEAKKMMSRMRLNGLKDNVATNTSLLKGLCIVGKSDEAFKHLREMVSRGMK 369

Query: 545 PNIASAEII 571
           P++ +  ++
Sbjct: 370 PDVKAYGVV 378


>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
           gi|482565317|gb|EOA29506.1| hypothetical protein
           CARUB_v10013258mg [Capsella rubella]
          Length = 607

 Score =  110 bits (276), Expect = 4e-22
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   L G + E  KLL  ML+ G+ P   T N II  +CK+    VD+A ++
Sbjct: 232 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG--MVDRAFEM 289

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +      G  PD  +YNILL+A L         + + +M+ +   P++VTY IL  TLC+
Sbjct: 290 VRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 349

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            GKI +A   L ++   G+SP    Y+  ++A  R G++   +  L+ M S GC P+I +
Sbjct: 350 DGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVN 409

Query: 560 AEIIHRAISKGRMKCFPKAKELLE-FARCGNDG 655
              +   + K       KA + LE F + G  G
Sbjct: 410 YNTVLATLCKN-----GKADQALEIFGKLGEVG 437



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 50/189 (26%), Positives = 97/189 (51%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F  +  I +  ++++ +   G  P     N +I+  CK    ++D A +
Sbjct: 127 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMN--RIDDATR 183

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L R R+ G  PDT TYNI++ +        LA + + ++     +P ++TY IL     
Sbjct: 184 VLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATM 243

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
             G + +A + L+ +L+ G+ P +  YN  +  M + G +     +++++   GCEP++ 
Sbjct: 244 LEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVI 303

Query: 557 SAEIIHRAI 583
           S  I+ RA+
Sbjct: 304 SYNILLRAL 312



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 50/186 (26%), Positives = 92/186 (49%)
 Frame = +2

Query: 26  SFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILT 205
           S+  L+  F   G++    + L+ M+++G  P     N ++  +CK    K DQA +I  
Sbjct: 374 SYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNG--KADQALEIFG 431

Query: 206 RFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMG 385
           +   +G  P++++YN +  A   +     A   + EM  QG+ PD +TY  + + LC+ G
Sbjct: 432 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREG 491

Query: 386 KISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAE 565
            + +AF+ L  + +    P V  YN  L    +  +I D + +L+ M  +GC PN ++  
Sbjct: 492 MVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYT 551

Query: 566 IIHRAI 583
           ++   I
Sbjct: 552 VLIEGI 557



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 55/183 (30%), Positives = 88/183 (48%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + +V+S+  L++     G+  E  KL+  M +    P+  T +++I  +C+    K+
Sbjct: 296 RGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG--KI 353

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           ++A  +L   +  G+ PD  +Y+ L+ A  R     LA E++  M   G  PD+V Y  +
Sbjct: 354 EEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTV 413

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
             TLCK GK   A E    L   G SP  S YN   SA+   G     L ++  M S G 
Sbjct: 414 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGI 473

Query: 542 EPN 550
           +P+
Sbjct: 474 DPD 476



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPL-KVDQAQKILTRFRNMGVLPDT 238
           G   E   LL+ M+  G +P       +I      + + K  +  +IL +F      PD 
Sbjct: 107 GNYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----PDV 162

Query: 239 TTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNM 418
             YN L+    +      A   +  M  +G  PD VTY I+  +LC  GK+  A + L+ 
Sbjct: 163 FAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQ 222

Query: 419 LLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           LL++   P V  Y   + A +  G + + L LL  M S G +P++ +   I R + K  M
Sbjct: 223 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 282


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330308|gb|EFH60727.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  110 bits (275), Expect = 6e-22
 Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   L G + E  KLL  ML+ G+ P   T N II  +CK+    VD+A ++
Sbjct: 224 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG--MVDRAFEM 281

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +      G  PD  +YNILL+A L         + + +M+ +   P++VTY IL  TLC+
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            GKI +A   L ++   G++P    Y+  ++A  R G++   +  L+ M S GC P+I +
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401

Query: 560 AEIIHRAISKGRMKCFPKAKELLE-FARCGNDG 655
              +   + K       KA + LE F + G  G
Sbjct: 402 YNTVLATLCKN-----GKADQALEIFGKLGEVG 429



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 51/186 (27%), Positives = 89/186 (47%)
 Frame = +2

Query: 26  SFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILT 205
           S+  L+  F   G++    + L+ M+++G  P     N ++  +CK    K DQA +I  
Sbjct: 366 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG--KADQALEIFG 423

Query: 206 RFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMG 385
           +   +G  P++++YN +  A   +     A   +LEM   G+ PD +TY  + + LC+ G
Sbjct: 424 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREG 483

Query: 386 KISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAE 565
            +  AFE L  + +    P V  YN  L    +  +I D + +L  M  +GC PN  +  
Sbjct: 484 MVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYT 543

Query: 566 IIHRAI 583
           ++   I
Sbjct: 544 VLIEGI 549



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 50/190 (26%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F  +  + +  ++++ +   G  P     N +I+  CK    ++D A +
Sbjct: 119 DVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMN--RIDDATR 175

Query: 197 ILTRFRNMGVLPDTTTYNILL-QAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           +L R R+    PDT TYNI++     R ++D LA + + ++     +P ++TY IL    
Sbjct: 176 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD-LALKVLDQLLSDNCQPTVITYTILIEAT 234

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
              G + +A + L+ +L+ G+ P +  YN  +  M + G +     +++++   GCEP++
Sbjct: 235 MLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294

Query: 554 ASAEIIHRAI 583
            S  I+ RA+
Sbjct: 295 ISYNILLRAL 304



 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 53/178 (29%), Positives = 87/178 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+S+  L++     G+  E  KL+  M +    P+  T +++I  +C+    K+++A  
Sbjct: 293 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG--KIEEAMN 350

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L   +  G+ PD  +Y+ L+ A  R     +A E++  M   G  PD+V Y  +  TLC
Sbjct: 351 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 410

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           K GK   A E    L   G SP  S YN   SA+   G     L ++  M S+G +P+
Sbjct: 411 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPD 468



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPL-KVDQAQKILTRFRNMGVLPDT 238
           G   E   LL+ M+  G +P       +I      + + K  +  +IL +F      PD 
Sbjct: 99  GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ----PDV 154

Query: 239 TTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNM 418
             YN L+    +      A   +  M  +   PD VTY I+  +LC  GK+  A + L+ 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 419 LLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           LL++   P V  Y   + A +  G + + L LL  M S G +P++ +   I R + K  M
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  110 bits (275), Expect = 6e-22
 Identities = 63/184 (34%), Positives = 98/184 (53%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   L G I    KLL  ML+ G+ P T T N II  +CK+  + VD+A ++
Sbjct: 208 VITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE--MMVDKAFEL 265

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           L    + G  PD  TYNILL+  L     +   + + EM   G KP++VT+ IL  TLC+
Sbjct: 266 LRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCR 325

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            GK+ +A   L  +   G+ P    Y+  ++   R G++      L++M S GC P+I +
Sbjct: 326 DGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVN 385

Query: 560 AEII 571
              I
Sbjct: 386 YNTI 389



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 54/185 (29%), Positives = 90/185 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V ++  L+  F    Q+    ++L  M + G  P   T N++I + C +   K+D A +
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG--KLDLALE 194

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           I          P   TY IL++A +      +A + + EM  +G++PD +TY  +   +C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K   +  AFE L  L + G  P +  YN  L  +L RGK  +   L+  M S GC+PN+ 
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314

Query: 557 SAEII 571
           +  I+
Sbjct: 315 THSIL 319



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 49/171 (28%), Positives = 85/171 (49%)
 Frame = +2

Query: 38  LMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRN 217
           L+  F   G++    + L+YM+++G  P     N I+  +C+    K DQA ++  +   
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTG--KADQALEVFEKLDE 411

Query: 218 MGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISD 397
           +G  P+ ++YN L  A   +     A E +L++  QG+ PD +TY  L + LC+ G + +
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471

Query: 398 AFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           A E L  + +    P V  YN  L  + +  +  D + +L  M   GC+PN
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F     I +  ++++ +   G  P     N +I    K   L  + A +
Sbjct: 103 DVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQL--ENANR 159

Query: 197 ILTRFRNMGVLPDTTTYNILLQA-ALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           +L R ++ G LPD  TYNI++ +   R ++D LA E   E+ +   +P ++TY IL    
Sbjct: 160 VLDRMKSRGFLPDVVTYNIMIGSFCSRGKLD-LALEIFEELLKDNCEPTVITYTILIEAT 218

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
              G I  A + L+ +L+ G+ P    YN  +  M +   +     LL+ ++S GC+P+I
Sbjct: 219 ILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDI 278

Query: 554 ASAEIIHRA-ISKGR 595
            +  I+ R  +S+G+
Sbjct: 279 ITYNILLRTLLSRGK 293



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 49/178 (27%), Positives = 86/178 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +++++  L++     G+ +E  KL+  M++ G  P+  T +++I  +C+    KV++A  
Sbjct: 277 DIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG--KVEEAVN 334

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L   +  G+ PD   Y+ L+    R     LA E++  M   G  PD+V Y  +   LC
Sbjct: 335 LLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLC 394

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           + GK   A E    L   G  P VS YN   SA+   G     L ++  + + G +P+
Sbjct: 395 RTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 52/191 (27%), Positives = 85/191 (44%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NVV+ + L+      G++ E   LL+ M   G+ P     + +I   C++   ++D A +
Sbjct: 312 NVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG--RLDLATE 369

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            L    + G LPD   YN ++    R      A E   ++   G  P++ +Y  L + L 
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
             G    A E +  LL  G+ P    YN+ +S + R G + + + LL  M S    PN+ 
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 557 SAEIIHRAISK 589
           S  II   + K
Sbjct: 490 SYNIILLGLCK 500



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 1/207 (0%)
 Frame = +2

Query: 11  DLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPL-KVDQ 187
           D   V    L+      G+  E    L+ M++ G +P       +I      + + K  +
Sbjct: 66  DFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATR 125

Query: 188 AQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNN 367
             +IL R+      PD   YN L+   ++A     A+  +  M  +G  PD+VTY I+  
Sbjct: 126 VMEILERYGK----PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIG 181

Query: 368 TLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEP 547
           + C  GK+  A E    LL +   P V  Y   + A +  G I   + LL  M S G EP
Sbjct: 182 SFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEP 241

Query: 548 NIASAEIIHRAISKGRMKCFPKAKELL 628
           +  +   I R + K  M    KA ELL
Sbjct: 242 DTLTYNAIIRGMCKEMM--VDKAFELL 266


>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
          Length = 587

 Score =  110 bits (274), Expect = 7e-22
 Identities = 64/185 (34%), Positives = 94/185 (50%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           ++ S+  ++  F    ++    K+L  M   G SP T T N++I ++C +   KVD A K
Sbjct: 141 DLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRG--KVDMAFK 198

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L         P   TY IL++A +       A E + EM  +G+ PDM TY  +   +C
Sbjct: 199 VLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGMC 258

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           + G +  AFE +  L A G SP V  YN  L A+L RGK  D   +L  M S GCEPN+ 
Sbjct: 259 REGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNVV 318

Query: 557 SAEII 571
           +  I+
Sbjct: 319 TYSIL 323



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 55/191 (28%), Positives = 103/191 (53%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+++T L++     G + +  ++L+ ML+ G+ P   T N I+  +C++  L  D+A +
Sbjct: 211 SVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGMCREGML--DRAFE 268

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
            +      G  P+  +YNILL+A L     +   + + +M  +G +P++VTY IL +TLC
Sbjct: 269 FVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNVVTYSILISTLC 328

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           + GK+ DA   L  +   G++P    Y+  +SA  + G++   +  + +M S G  P+I 
Sbjct: 329 RDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIV 388

Query: 557 SAEIIHRAISK 589
           +   I  A+ K
Sbjct: 389 NYNTILAALCK 399



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRNMGVLPDTT 241
           G++   +K+L  +L +   PS  T  ++I     +    VD+A ++L    + G+LPD  
Sbjct: 191 GKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGG--VDKAMEVLEEMLSRGLLPDMF 248

Query: 242 TYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNML 421
           TYN +++   R  +   A E+V  +  +G  P++++Y IL   L   GK SD  + L+ +
Sbjct: 249 TYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDM 308

Query: 422 LANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISK-GRM 598
           ++ G  P V  Y+  +S + R GK+ D + +LK M   G  P+  S + +  A  K GR+
Sbjct: 309 VSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRL 368



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 52/178 (29%), Positives = 85/178 (47%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           NV+S+  L++     G+ ++  K+L  M++ G  P+  T +++I  +C+    KV+ A  
Sbjct: 281 NVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNVVTYSILISTLCRDG--KVEDAVN 338

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L   +  G+ PD  +Y+ L+ A  +     LA E++  M   G  PD+V Y  +   LC
Sbjct: 339 VLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALC 398

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           K G    A E    L   G  P VS YN   SA+   G+    L ++  M S    P+
Sbjct: 399 KNGNADHALEIFEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPD 456



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 50/183 (27%), Positives = 83/183 (45%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           + I  +  S+  L+  F   G++    + + YM+++G  P     N I+  +CK      
Sbjct: 346 KGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNG--NA 403

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A +I  +   +G  P  ++YN +  A         A E + EM  + + PD +TY  L
Sbjct: 404 DHALEIFEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSL 463

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + LC+ G +++A   L  + A G    V  YN  L  + +  +I D + LL  M   GC
Sbjct: 464 ISCLCREGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGC 523

Query: 542 EPN 550
            PN
Sbjct: 524 RPN 526



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 45/179 (25%), Positives = 82/179 (45%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRNMGVLPDTT 241
           G+  E    L+ M++ G  P       ++      +   + +A +++      G  PD  
Sbjct: 87  GKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSR--NIPKAIRVMEILEKHGE-PDLF 143

Query: 242 TYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNML 421
           +YN ++    +A    LA++ +  M  QG  PD +TY I+  +LC  GK+  AF+ L+ L
Sbjct: 144 SYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAFKVLDEL 203

Query: 422 LANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           L +   P V  Y   + A +  G +   + +L+ M S G  P++ +   I R + +  M
Sbjct: 204 LRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGMCREGM 262



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 47/198 (23%), Positives = 95/198 (47%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + NVV+++ L+      G++ +   +L+ M   GI+P   + + +I   CK+   ++
Sbjct: 311 RGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEG--RL 368

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A + +    + G LPD   YN +L A  +      A E   ++   G  P + +Y  +
Sbjct: 369 DLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTM 428

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + L   G+   A E ++ +++  ++P    YN+ +S + R G + + + LL  M + G 
Sbjct: 429 FSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGF 488

Query: 542 EPNIASAEIIHRAISKGR 595
           + ++ S  I+   + K R
Sbjct: 489 KLSVISYNIVLLGLCKAR 506


>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
           gi|550316702|gb|ERP48891.1| hypothetical protein
           POPTR_0019s03630g [Populus trichocarpa]
          Length = 586

 Score =  110 bits (274), Expect = 7e-22
 Identities = 64/190 (33%), Positives = 107/190 (56%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           ++++T L++   L G I E  KLL  ML+ G+ P T T NVI+  + K+   KV+QA ++
Sbjct: 213 LITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFTYNVIVRGLGKEG--KVNQAFEL 270

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +    + G  PD  TYNILL+A L         + + EM+ +G +P++VTY IL ++LC+
Sbjct: 271 VRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGCEPNVVTYSILISSLCR 330

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            GKI ++   + ++   G++P    Y+  ++A  R GK+   +  L +M S G  P+I +
Sbjct: 331 DGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVN 390

Query: 560 AEIIHRAISK 589
              I  A+ K
Sbjct: 391 YNTIMAALCK 400



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V ++  ++  F    +I    K+L  M   G S    T N++I   C K   K+D A K
Sbjct: 141 DVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSKG--KIDLALK 198

Query: 197 ILTRF-RNMGVLPDTTTYNILLQA-ALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNT 370
           +     ++    P   TY IL++A  L   +D    + + EM  +G++PD  TY ++   
Sbjct: 199 VFEELLKDNNCKPTLITYTILIEAHILEGGIDE-GLKLLDEMLSRGLEPDTFTYNVIVRG 257

Query: 371 LCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           L K GK++ AFE +  L + G  P V  YN  L A+L +GK  +   L+  M S GCEPN
Sbjct: 258 LGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGCEPN 317

Query: 551 IASAEII 571
           + +  I+
Sbjct: 318 VVTYSIL 324



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 48/171 (28%), Positives = 82/171 (47%)
 Frame = +2

Query: 38  LMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRN 217
           L+  F   G++    K L YM+++G  P     N I+  +CK      D A +I  +   
Sbjct: 359 LIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNG--NSDHAVEIFGKLEE 416

Query: 218 MGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISD 397
           +G  P+ ++YN +L A   +     A   + +M   G+ PD +TY  L + LC+ G + +
Sbjct: 417 VGCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDE 476

Query: 398 AFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           A   L  +L+    P +  YN  L  + +  +I D + +L  M  +GC+PN
Sbjct: 477 AIGLLADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPN 527



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F     I +  ++++ +  +G  P     N +I   CK    +++ A+K
Sbjct: 107 DVIMCTKLIKGFFNSRNIEKATRVMEILEKHG-EPDVFAYNAVISGFCKAN--RIESAKK 163

Query: 197 ILTRFRNMGVLPDTTTYNILLQA-ALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           +L R +  G   D  TYNI++     + ++D     +   +     KP ++TY IL    
Sbjct: 164 VLDRMKRKGFSQDVVTYNIMIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAH 223

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
              G I +  + L+ +L+ G+ P    YN  +  + + GK+     L++ + S GC+P++
Sbjct: 224 ILEGGIDEGLKLLDEMLSRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDV 283

Query: 554 ASAEIIHRAI 583
            +  I+ RA+
Sbjct: 284 ITYNILLRAL 293



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 52/196 (26%), Positives = 92/196 (46%)
 Frame = +2

Query: 2   RDIDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKV 181
           R  + NVV+++ L+      G+I E   L++ M   G++P     + +I   C++   K+
Sbjct: 312 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG--KL 369

Query: 182 DQAQKILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGIL 361
           D A K L    + G LPD   YN ++ A  +      A E   ++   G  P++ +Y  +
Sbjct: 370 DMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTM 429

Query: 362 NNTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGC 541
            + L   G    A   ++ +L+ G+ P    YN+ +S + R G + + + LL  M S   
Sbjct: 430 LSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRF 489

Query: 542 EPNIASAEIIHRAISK 589
           +PNI S  I+   + K
Sbjct: 490 QPNIVSYNIVLLGLCK 505



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYML-NNGISPSTTTLNVIIHNVCKKQPLKVDQAQ 193
           +VV++  ++  F   G+I    K+ + +L +N   P+  T  ++I     +    +D+  
Sbjct: 176 DVVTYNIMIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGG--IDEGL 233

Query: 194 KILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           K+L    + G+ PDT TYN++++   +      A E V  +  +G KPD++TY IL   L
Sbjct: 234 KLLDEMLSRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRAL 293

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
              GK  +  + ++ + + G  P V  Y+  +S++ R GKI + + L+K M   G  P+
Sbjct: 294 LDQGKWYEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPD 352


>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 575

 Score =  109 bits (273), Expect = 1e-21
 Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 6/208 (2%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   L G I E  KLL  ML+ G+ P   T N II  +C+++ +  DQA + 
Sbjct: 197 VITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGMCREKMM--DQAYEF 254

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVL-EMYRQGVKPDMVTYGILNNTLC 376
           +    + G  PD  +YNILL+A L  R      E ++ EM   G +P++VTY IL + LC
Sbjct: 255 VRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEPNVVTYSILMSALC 314

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           + GK+ +A   L +++  G++P    Y+  +SA  + G++   +  L +M ++GC P+I 
Sbjct: 315 RDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMITNGCLPDIV 374

Query: 557 SAE-IIHRAISKGR----MKCFPKAKEL 625
           +   I+     KG+    M+ F K  E+
Sbjct: 375 NYNTILSTMCKKGKADEAMEVFEKLAEI 402



 Score =  103 bits (258), Expect = 5e-20
 Identities = 56/171 (32%), Positives = 86/171 (50%)
 Frame = +2

Query: 38  LMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILTRFRN 217
           L+  F   G++    K L YM+ NG  P     N I+  +CKK   K D+A ++  +   
Sbjct: 344 LISAFCKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKG--KADEAMEVFEKLAE 401

Query: 218 MGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISD 397
           +G  PD +TYN L+ A       A A + V EM  +GV PD +TY  L + LC+ G +++
Sbjct: 402 IGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNE 461

Query: 398 AFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           A + L  +  NG  P V  YN  L  + +  ++ + + +L  M   GC PN
Sbjct: 462 ALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPN 512



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
 Frame = +2

Query: 17  NVVSFTCLMK-YFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQ 193
           +V+S+  L++      G+ ++  KL+  ML  G  P+  T ++++  +C+    K+D+A 
Sbjct: 266 DVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDG--KLDEAI 323

Query: 194 KILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
            +L    + G+ PDT TY+ L+ A  +     +A +++  M   G  PD+V Y  + +T+
Sbjct: 324 NLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTM 383

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
           CK GK  +A E    L   G  P VS YN  +SA+   G     L ++  M   G +P+ 
Sbjct: 384 CKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPD- 442

Query: 554 ASAEIIHRAI 583
              EI + A+
Sbjct: 443 ---EITYNAL 449



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F       +  K++Q +   G  P     N ++   CK    K+++A K
Sbjct: 91  DVILCTKLIKGFFNSKNSDKGVKVMQILEQFG-EPDVFAYNALVSGFCKMN--KIEEANK 147

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQ--GVKPDMVTYGILNNT 370
           +L R +  G  PD+ TYNIL+  +L  R    +   +L+  ++    KP ++TY IL   
Sbjct: 148 VLNRMKTHGFPPDSVTYNILI-GSLCDRGKLGSALMLLDQLKEEHNCKPTVITYTILIEA 206

Query: 371 LCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
               G I +A + L+ +L+ G+ P +  YN  +  M R   +      ++ + S GC+P+
Sbjct: 207 TILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPD 266

Query: 551 IASAEIIHRAISKGRMKCFPKAKELLEFARCGNDGHQQMQYYLKNNNRCVKG----A*TN 718
           + S  I+ RA+   R K +   ++L+    C       + Y +  +  C  G    A   
Sbjct: 267 VISYNILLRALLHHRGK-WSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDGKLDEAINL 325

Query: 719 TPCEVDKGIS 748
               VDKG++
Sbjct: 326 LKIMVDKGLT 335


>ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 551

 Score =  109 bits (272), Expect = 1e-21
 Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +VVSFT L+  +S  G   E  + L+ M+  G SP+  T N ++  +C     +VD+A+K
Sbjct: 263 DVVSFTTLIDGYSKRGGFQEALECLKEMVERGCSPNAVTYNALVEGLCLSG--EVDEARK 320

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +++R R  G+  D  T   LL+          A +++ EM  +G+KPD+  YG++ N  C
Sbjct: 321 MMSRMRLNGLKDDVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMKPDVKAYGVVVNEYC 380

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIA 556
           K+ K S+A   L  ++  GV P VS +N     ++  GKI + L LLK M   GC PN  
Sbjct: 381 KIRKPSEAVLLLREMVVRGVKPNVSSFNAVFRVLVDEGKIDEGLHLLKQMPKMGCSPNFL 440

Query: 557 S--AEIIHRAISKGRMK 601
           S    I      KGRM+
Sbjct: 441 SYCTVICGLCEVKGRMQ 457



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   IDLNVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQ 187
           ++ +V ++T +++ F  VG++    K+   M      P+  T N +IH  CKK  +  D 
Sbjct: 192 LEPDVYTYTTMIRGFCKVGKVESARKVFDEMR---CEPNIVTYNTLIHGFCKKGDM--DG 246

Query: 188 AQKILTRF-RNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILN 364
           A+++  R   +    PD  ++  L+    +      A E + EM  +G  P+ VTY  L 
Sbjct: 247 ARRVFDRMVESQSCKPDVVSFTTLIDGYSKRGGFQEALECLKEMVERGCSPNAVTYNALV 306

Query: 365 NTLCKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCE 544
             LC  G++ +A + ++ +  NG+   V+   + L      GK  + +  L+ M S G +
Sbjct: 307 EGLCLSGEVDEARKMMSRMRLNGLKDDVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMK 366

Query: 545 PNIASAEII 571
           P++ +  ++
Sbjct: 367 PDVKAYGVV 375


>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
           gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical
           protein [Arabidopsis thaliana]
           gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis
           thaliana] gi|22136960|gb|AAM91709.1| unknown protein
           [Arabidopsis thaliana] gi|332640611|gb|AEE74132.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 602

 Score =  109 bits (272), Expect = 1e-21
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
 Frame = +2

Query: 20  VVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKI 199
           V+++T L++   L G + E  KL+  ML+ G+ P   T N II  +CK+    VD+A ++
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG--MVDRAFEM 285

Query: 200 LTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCK 379
           +      G  PD  +YNILL+A L         + + +M+ +   P++VTY IL  TLC+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 380 MGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIAS 559
            GKI +A   L ++   G++P    Y+  ++A  R G++   +  L+ M S GC P+I +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405

Query: 560 AEIIHRAISKGRMKCFPKAKELLE-FARCGNDG 655
              +   + K       KA + LE F + G  G
Sbjct: 406 YNTVLATLCKN-----GKADQALEIFGKLGEVG 433



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 51/186 (27%), Positives = 91/186 (48%)
 Frame = +2

Query: 26  SFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQKILT 205
           S+  L+  F   G++    + L+ M+++G  P     N ++  +CK    K DQA +I  
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG--KADQALEIFG 427

Query: 206 RFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMG 385
           +   +G  P++++YN +  A   +     A   +LEM   G+ PD +TY  + + LC+ G
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 386 KISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAE 565
            + +AFE L  + +    P V  YN  L    +  +I D + +L+ M  +GC PN  +  
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 566 IIHRAI 583
           ++   I
Sbjct: 548 VLIEGI 553



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 50/190 (26%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+  T L+K F  +  I +  ++++ +   G  P     N +I+  CK    ++D A +
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMN--RIDDATR 179

Query: 197 ILTRFRNMGVLPDTTTYNILL-QAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTL 373
           +L R R+    PDT TYNI++     R ++D LA + + ++     +P ++TY IL    
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD-LALKVLNQLLSDNCQPTVITYTILIEAT 238

Query: 374 CKMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNI 553
              G + +A + ++ +L+ G+ P +  YN  +  M + G +     +++++   GCEP++
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298

Query: 554 ASAEIIHRAI 583
            S  I+ RA+
Sbjct: 299 ISYNILLRAL 308



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 53/178 (29%), Positives = 87/178 (48%)
 Frame = +2

Query: 17  NVVSFTCLMKYFSLVGQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPLKVDQAQK 196
           +V+S+  L++     G+  E  KL+  M +    P+  T +++I  +C+    K+++A  
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG--KIEEAMN 354

Query: 197 ILTRFRNMGVLPDTTTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLC 376
           +L   +  G+ PD  +Y+ L+ A  R     +A E++  M   G  PD+V Y  +  TLC
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414

Query: 377 KMGKISDAFEKLNMLLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPN 550
           K GK   A E    L   G SP  S YN   SA+   G     L ++  M S+G +P+
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
 Frame = +2

Query: 62  GQITECYKLLQYMLNNGISPSTTTLNVIIHNVCKKQPL-KVDQAQKILTRFRNMGVLPDT 238
           G   E   LL+ M+  G +P       +I      + + K  +  +IL +F      PD 
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----PDV 158

Query: 239 TTYNILLQAALRARVDALAHEYVLEMYRQGVKPDMVTYGILNNTLCKMGKISDAFEKLNM 418
             YN L+    +      A   +  M  +   PD VTY I+  +LC  GK+  A + LN 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 419 LLANGVSPGVSIYNNFLSAMLRRGKIGDVLLLLKHMASHGCEPNIASAEIIHRAISKGRM 598
           LL++   P V  Y   + A +  G + + L L+  M S G +P++ +   I R + K  M
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278