BLASTX nr result
ID: Rheum21_contig00023135
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00023135
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] 106 4e-21
gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis] 104 1e-20
ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [A... 103 2e-20
ref|XP_006606481.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 103 2e-20
ref|XP_006606479.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 103 2e-20
ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isof... 103 2e-20
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 103 3e-20
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc... 103 3e-20
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 102 5e-20
gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus pe... 101 9e-20
ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citr... 100 2e-19
gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlise... 100 2e-19
gb|ESW16799.1| hypothetical protein PHAVU_007G185300g [Phaseolus... 100 3e-19
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu... 99 4e-19
ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Caps... 99 4e-19
ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fra... 99 4e-19
ref|XP_002328516.1| predicted protein [Populus trichocarpa] 99 4e-19
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ... 99 6e-19
gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidops... 99 6e-19
gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays] 99 8e-19
>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 106 bits (264), Expect = 4e-21
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYP SIAD +EEEP + +GVLLP+DVS PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMN 57
>gb|EXB39214.1| 5'-3' exoribonuclease 4 [Morus notabilis]
Length = 957
Score = 104 bits (259), Expect = 1e-20
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSI+D +EEEP E+ +G+ +P+DVS PNPNG+EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVEEEPKEDSNGIPMPIDVSKPNPNGLEFDNLYLDMN 57
>ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
gi|548830590|gb|ERM93513.1| hypothetical protein
AMTR_s00004p00046450 [Amborella trichopoda]
Length = 936
Score = 103 bits (258), Expect = 2e-20
Identities = 47/57 (82%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPL I D IEEEP E ++GVLLPVDVS PNPN EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVIEEEPVEGDNGVLLPVDVSKPNPNNTEFDNLYLDMN 57
>ref|XP_006606481.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X3 [Glycine max]
Length = 907
Score = 103 bits (257), Expect = 2e-20
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSIAD +EE+P +DGV P+D S PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMN 57
>ref|XP_006606479.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Glycine max]
Length = 932
Score = 103 bits (257), Expect = 2e-20
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSIAD +EE+P +DGV P+D S PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMN 57
>ref|XP_006606480.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Glycine max]
Length = 931
Score = 103 bits (257), Expect = 2e-20
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSIAD +EE+P +DGV P+D S PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMN 57
>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 103 bits (256), Expect = 3e-20
Identities = 46/57 (80%), Positives = 48/57 (84%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYP SIAD +EEEP GVL P+DVS PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMN 57
>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 103 bits (256), Expect = 3e-20
Identities = 46/57 (80%), Positives = 48/57 (84%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYP SIAD +EEEP GVL P+DVS PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMN 57
>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 964
Score = 102 bits (254), Expect = 5e-20
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPL+I D +EEEP E+ +GV+ P+D+S PNPNG+EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMN 57
>gb|EMJ09572.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
Length = 972
Score = 101 bits (252), Expect = 9e-20
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSI D +EE+P E +GV LP+DVS PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEQPREGPNGVPLPIDVSRPNPNGYEFDNLYLDMN 57
>ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citrus clementina]
gi|568835355|ref|XP_006471738.1| PREDICTED: 5'-3'
exoribonuclease 4-like [Citrus sinensis]
gi|557535179|gb|ESR46297.1| hypothetical protein
CICLE_v10000168mg [Citrus clementina]
Length = 959
Score = 100 bits (250), Expect = 2e-19
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSI D +EE+P + +GV PVDVS PNPNGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEDPQVDGEGVARPVDVSKPNPNGMEFDNLYLDMN 57
>gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlisea aurea]
Length = 955
Score = 100 bits (250), Expect = 2e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPL I D +EEEP NE G+ +P+D+S PNPNG+EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLCIVDVVEEEPRRNEFGMEIPIDISGPNPNGIEFDNLYLDMN 57
>gb|ESW16799.1| hypothetical protein PHAVU_007G185300g [Phaseolus vulgaris]
Length = 932
Score = 99.8 bits (247), Expect = 3e-19
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPL IAD IE+EP +DGV LP+D S PN NGMEFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLCIADVIEDEPAVGDDGVPLPIDASKPNLNGMEFDNLYLDMN 57
>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
protein [Populus trichocarpa]
Length = 948
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSI D IEEEP E+ +G P+DVS PNPNG+E+DNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMN 57
>ref|XP_006301240.1| hypothetical protein CARUB_v10021640mg [Capsella rubella]
gi|482569950|gb|EOA34138.1| hypothetical protein
CARUB_v10021640mg [Capsella rubella]
Length = 948
Score = 99.4 bits (246), Expect = 4e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYP SI+D +EEEPT+ G L+PVD++ PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITKPNPNGFEFDNLYLDMN 57
>ref|XP_004302012.1| PREDICTED: 5'-3' exoribonuclease 4-like [Fragaria vesca subsp.
vesca]
Length = 971
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSI D +EE P E+ +GV P+DVS PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVVEEHPREDPNGVPRPIDVSRPNPNGFEFDNLYLDMN 57
>ref|XP_002328516.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPLSI D IEEEP E+ +G P+DVS PNPNG+E+DNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMN 57
>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
1; AltName: Full=Protein ETHYLENE INSENSITIVE 5;
AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
thaliana] gi|17381112|gb|AAL36368.1| putative
exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease
[Arabidopsis thaliana] gi|109627646|gb|ABG34298.1|
At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4
[Arabidopsis thaliana]
Length = 947
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYP SI+D +EEEPT+ G L+PVD++ PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMN 57
>gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYP SI+D +EEEPT+ G L+PVD++ PNPNG EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMN 57
>gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +2
Query: 143 MGVPAFYRWLADRYPLSIADAIEEEPTENEDGVLLPVDVSSPNPNGMEFDNLYLDMN 313
MGVPAFYRWLADRYPL+++DA EEEP E E G +PVD+ PNPNG+EFDNLYLDMN
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMN 57