BLASTX nr result
ID: Rheum21_contig00023132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00023132
(350 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002489309.1| hypothetical protein SORBIDRAFT_0010s008890 ... 122 4e-26
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 122 6e-26
emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group] 122 6e-26
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 120 2e-25
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group] 119 4e-25
gb|ABA98073.1| retrotransposon protein, putative, unclassified [... 117 1e-24
ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777... 114 2e-23
gb|AAT38052.1| unknown protein [Oryza sativa Japonica Group] gi|... 114 2e-23
gb|EMT30033.1| hypothetical protein F775_17829 [Aegilops tauschii] 113 2e-23
gb|ABA94365.1| retrotransposon protein, putative, unclassified [... 112 7e-23
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc... 111 1e-22
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 110 2e-22
gb|ABB47203.2| retrotransposon protein, putative, unclassified [... 110 2e-22
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 110 2e-22
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group] 110 2e-22
ref|XP_002445301.1| hypothetical protein SORBIDRAFT_07g008525 [S... 109 4e-22
gb|ABA99152.1| retrotransposon protein, putative, unclassified [... 108 6e-22
gb|ADB85383.1| putative retrotransposon protein [Phyllostachys e... 108 6e-22
ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766... 108 7e-22
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g... 108 7e-22
>ref|XP_002489309.1| hypothetical protein SORBIDRAFT_0010s008890 [Sorghum bicolor]
gi|241946957|gb|EES20102.1| hypothetical protein
SORBIDRAFT_0010s008890 [Sorghum bicolor]
Length = 1017
Score = 122 bits (307), Expect = 4e-26
Identities = 56/100 (56%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNL---SASFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TRA+DGIHKP + + + SPI T+ + AL+DP W +MQ E+NAL N TW V
Sbjct: 356 VTRARDGIHKPNPRYAMVSDAPEISPIQTSARAALRDPNWKAAMQREFNALQANHTWRLV 415
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
PRP+ ANVVTGKW+F+HK+ PDG L RYKARWV RG++Q+
Sbjct: 416 PRPARANVVTGKWVFKHKHNPDGSLDRYKARWVVRGFTQR 455
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 122 bits (305), Expect = 6e-26
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
TR K G+ KP NL AS SP+ TY+ AL DP W +M+EE+ AL NRTW VPRP
Sbjct: 1059 TRGKAGVRKPVQRLNLHASTLSPVPRTYRAALADPYWRTAMEEEFTALTANRTWDLVPRP 1118
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
S ANVVTGKW+F+HK+ DG L RYKARWV RG+SQ+
Sbjct: 1119 SGANVVTGKWIFKHKFQSDGTLDRYKARWVLRGFSQR 1155
>emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]
Length = 322
Score = 122 bits (305), Expect = 6e-26
Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
TR K G+H+P +NLSA+ SP+ TY+ AL DP W +M+EE+ AL NRTW VPRP
Sbjct: 3 TRGKHGLHQPVKRYNLSATTLSPVPRTYRPALADPNWRSAMEEEFTALQANRTWDLVPRP 62
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
+ ANVVTGKW+FR+K+ DG L RYKARWV RG++Q+
Sbjct: 63 NGANVVTGKWIFRYKFQSDGSLDRYKARWVLRGFTQR 99
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 120 bits (301), Expect = 2e-25
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
TRAK G HKP NL A+ S + TY+ AL DP W +M+EEYNAL+ NRTW VPRP
Sbjct: 1151 TRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTWDLVPRP 1210
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
+ NVVTGKW+F+HK+ DG L RYKARWV RG++Q+
Sbjct: 1211 AGVNVVTGKWIFKHKFHADGSLDRYKARWVLRGFTQR 1247
>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
Length = 811
Score = 119 bits (298), Expect = 4e-25
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
TRAK G HKP NL A+ S + TY+ AL DP W +M+EEYNAL+ NRTW VPRP
Sbjct: 283 TRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTWDLVPRP 342
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
+ NVV GKW+F+HK+ DG L RYKARWV RG++Q+
Sbjct: 343 ASVNVVAGKWIFKHKFHADGSLDRYKARWVLRGFTQR 379
>gb|ABA98073.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 724
Score = 117 bits (294), Expect = 1e-24
Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Frame = +2
Query: 8 RAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRPS 184
RAK G+ K T NL A+ SPI TY+ AL DP W +M+EEYNAL+ NRTW VP P
Sbjct: 203 RAKAGVRKELTRMNLHATPLSPIPKTYRAALADPNWRSAMEEEYNALLANRTWDLVPCPV 262
Query: 185 CANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
ANVVTGKW+F+HK+ DG L RYK RWV RG++Q+
Sbjct: 263 KANVVTGKWIFKHKFHADGSLDRYKVRWVLRGFTQR 298
>ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777694 [Setaria italica]
Length = 1416
Score = 114 bits (284), Expect = 2e-23
Identities = 52/96 (54%), Positives = 72/96 (75%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSASFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRPS 184
TR K G +P T+F+ S+S SP+ +Y+ AL DP W ++M EE++AL+ N TW VPRPS
Sbjct: 879 TRGKMGFWQP-TLFH-SSSLSPVPRSYRGALADPNWRQAMHEEFDALLSNNTWDLVPRPS 936
Query: 185 CANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
+N+VTGKW+F+HK+ DG L RYKARWV RG++Q+
Sbjct: 937 GSNIVTGKWIFKHKFHADGSLERYKARWVLRGFTQR 972
>gb|AAT38052.1| unknown protein [Oryza sativa Japonica Group]
gi|215741379|dbj|BAG97874.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 224
Score = 114 bits (284), Expect = 2e-23
Identities = 56/100 (56%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSAS---FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR+K G KP LS S SP++ Y+ AL DP W +M EE+ ALI N TW V
Sbjct: 72 VTRSKTGSLKPVDRLVLSVSHNAISPLSANYRSALADPNWRAAMAEEFKALIDNGTWRLV 131
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
PRP ANVVTGKW+F+HK+ DG L R+KARWV RGYSQQ
Sbjct: 132 PRPPGANVVTGKWIFKHKFHSDGSLARHKARWVVRGYSQQ 171
>gb|EMT30033.1| hypothetical protein F775_17829 [Aegilops tauschii]
Length = 764
Score = 113 bits (283), Expect = 2e-23
Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
TRAK GI +PK IF+L SPI TY+ AL+DP W +M EEY AL+ N TW V P
Sbjct: 3 TRAKQGIVQPKKIFDLHVEGLSPIPKTYRGALKDPNWHSAMVEEYGALLSNNTWDLVDPP 62
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYS 286
AN+VTGKW++RHK DG L RYKARWV RG++
Sbjct: 63 HNANIVTGKWIYRHKMKSDGSLDRYKARWVLRGFT 97
>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1064
Score = 112 bits (279), Expect = 7e-23
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSA---SFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR++ G +P FN +A S SP+ + Y+ AL DP W +M +EY AL+ N TW V
Sbjct: 571 VTRSQTGNLRPVHRFNYTAMQTSVSPVPSNYRSALADPNWRAAMADEYKALVDNNTWRLV 630
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
PRP ANVV+GKW+FRHK+ DG L R+KARWV R YSQQ
Sbjct: 631 PRPPGANVVSGKWIFRHKFHSDGTLARHKARWVVRDYSQQ 670
>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 978
Score = 111 bits (277), Expect = 1e-22
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSASF---SPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR++ G +P F +A+ SP+ + Y+ AL DP W +M +EY AL+ N TW V
Sbjct: 483 VTRSQTGHLRPIHRFTYTATHDVVSPVPSNYRSALADPNWRAAMADEYKALVDNNTWRLV 542
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
PRP ANVVTGKW+F+HK+ DG L R+KARWV RGYSQQ
Sbjct: 543 PRPPGANVVTGKWIFKHKFHSDGTLARHKARWVVRGYSQQ 582
>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
gi|241947225|gb|EES20370.1| hypothetical protein
SORBIDRAFT_0019s003280 [Sorghum bicolor]
Length = 761
Score = 110 bits (275), Expect = 2e-22
Identities = 51/96 (53%), Positives = 67/96 (69%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSASFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRPS 184
TR K G +P+ + A SPI + + AL DP W ++M+EEY AL+ N TW VPRP+
Sbjct: 225 TRGKAGFQQPRLGLHAEA-ISPIPRSCRDALTDPHWRQAMEEEYAALMDNHTWDLVPRPN 283
Query: 185 CANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
ANVVTGKW+F+HK+ DG L RYKARWV RG++Q+
Sbjct: 284 AANVVTGKWIFKHKFHADGTLDRYKARWVLRGFTQR 319
>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1050
Score = 110 bits (274), Expect = 2e-22
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSA---SFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR++ G P FN +A S SP+ + Y+ AL DP W +M +EY AL+ N TW V
Sbjct: 609 VTRSQTGNLHPAQRFNYTAMQTSVSPVPSNYRSALADPNWHAAMADEYKALVDNNTWHLV 668
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
P+P ANVVTGKW+FRHK+ DG L R+KAR V RGYSQQ
Sbjct: 669 PQPPGANVVTGKWIFRHKFHSDGTLARHKARCVVRGYSQQ 708
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 110 bits (274), Expect = 2e-22
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSA---SFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR++ G P FN +A S SP+ + Y+ AL DP W +M +EY AL+ N TW V
Sbjct: 809 VTRSQTGNLHPAQRFNYTAMQTSVSPVPSNYRSALADPNWHAAMADEYKALVDNNTWHLV 868
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
P+P ANVVTGKW+FRHK+ DG L R+KAR V RGYSQQ
Sbjct: 869 PQPPGANVVTGKWIFRHKFHSDGTLARHKARCVVRGYSQQ 908
>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1146
Score = 110 bits (274), Expect = 2e-22
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSA---SFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR++ G P FN +A S SP+ + Y+ AL DP W +M +EY AL+ N TW V
Sbjct: 705 VTRSQTGNLHPAQRFNYTAMQTSVSPVPSNYRSALADPNWHAAMADEYKALVDNNTWHLV 764
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
P+P ANVVTGKW+FRHK+ DG L R+KAR V RGYSQQ
Sbjct: 765 PQPPGANVVTGKWIFRHKFHSDGTLARHKARCVVRGYSQQ 804
>ref|XP_002445301.1| hypothetical protein SORBIDRAFT_07g008525 [Sorghum bicolor]
gi|241941651|gb|EES14796.1| hypothetical protein
SORBIDRAFT_07g008525 [Sorghum bicolor]
Length = 659
Score = 109 bits (272), Expect = 4e-22
Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSAS-FSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
T KDGI +P NL A+ SP+ ++ + AL DP W ++MQ+E++AL N TW VPRP
Sbjct: 128 TCGKDGIRQPVDRLNLHAAPLSPVPSSVRTALTDPAWRRAMQDEFDALQTNDTWTLVPRP 187
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
S N+VTG+W+F HK+ DG L RYKARWV RG++Q+
Sbjct: 188 SSVNLVTGEWVFHHKFKSDGSLDRYKARWVLRGFTQR 224
>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 989
Score = 108 bits (271), Expect = 6e-22
Identities = 48/96 (50%), Positives = 71/96 (73%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNLSASFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRPS 184
TRAK G H+ +++N S + SP+ T++ AL DP W +++EE++AL++N TW VPRP+
Sbjct: 449 TRAKAG-HRFPSVYN-STTLSPVPCTFRGALADPNWRAALEEEFSALLQNNTWELVPRPT 506
Query: 185 CANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
N+VTGKW+F+HK+ DG L RYKARWV G++Q+
Sbjct: 507 QVNIVTGKWIFKHKFRADGSLERYKARWVLGGFTQR 542
>gb|ADB85383.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 862
Score = 108 bits (271), Expect = 6e-22
Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSASF-SPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPR 178
+TR K P IFNL A+ SP+ +Y+ AL DP W +M EE++AL N TW +P
Sbjct: 325 VTRGKASYQHPVKIFNLHAALISPLPKSYRGALADPNWRAAMDEEFSALKANNTWDLIPC 384
Query: 179 PSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
PS AN+VT KW+FRHK P+G L RYKARWV RG++Q+
Sbjct: 385 PSSANIVTSKWVFRHKLHPNGSLDRYKARWVLRGFTQR 422
>ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766505 [Setaria italica]
Length = 943
Score = 108 bits (270), Expect = 7e-22
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 TRAKDGIHKPKTIFNL-SASFSPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFVPRP 181
TR K G +P NL + + S + +++ AL DP W +MQ E++AL+ N TW VPRP
Sbjct: 501 TRGKSGFRQPVDRLNLHTTTLSAVPKSFRSALADPHWRAAMQAEFDALLANDTWTLVPRP 560
Query: 182 SCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
S N++TGKW+FRHK+ DG L RYKARWV RG++Q+
Sbjct: 561 SGVNIITGKWIFRHKFLADGSLDRYKARWVLRGFTQR 597
>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
[Oryza sativa Japonica Group]
Length = 841
Score = 108 bits (270), Expect = 7e-22
Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Frame = +2
Query: 2 LTRAKDGIHKPKTIFNLSASF---SPITTTYKKALQDPQWFKSMQEEYNALIKNRTWVFV 172
+TR++ G +P F +A+ SP+ + Y+ AL DP W + EY AL+ N TW V
Sbjct: 300 VTRSQTGHLRPIQRFTYTATHDVVSPVPSNYRSALADPNWRAATANEYKALVDNNTWRLV 359
Query: 173 PRPSCANVVTGKWLFRHKYGPDGRLTRYKARWVARGYSQQ 292
PRP ANVVTGKW+F+HK+ DG L R+KARWV RGYSQQ
Sbjct: 360 PRPPGANVVTGKWIFKHKFHSDGTLARHKARWVVRGYSQQ 399