BLASTX nr result

ID: Rheum21_contig00023124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00023124
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    46   8e-06

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 46.2 bits (108), Expect(2) = 8e-06
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = +2

Query: 23   LPHDLVKKITSIPI-SLNDIHDRMYWETNKND*FSTNSAMELINRNKNFTAYDSSW--IW 193
            LP D++K+I  IP+ S++++ D   W   KN  FS  SA  LINR +  T    SW  +W
Sbjct: 983  LPPDILKQIKEIPLASMSEVEDDFTWNFEKNGTFSVKSAYYLINRREEETGGKGSWRGLW 1042

Query: 194  KMDTYPQQKL 223
            + +   + KL
Sbjct: 1043 RKNIPFKYKL 1052



 Score = 28.9 bits (63), Expect(2) = 8e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 211  PTKARLAEKCVAIPPGCIRCGAQLEDLNHLLFEC 312
            PT   LA++     P C+ C   +ED+ HL  +C
Sbjct: 1063 PTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDC 1096


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