BLASTX nr result
ID: Rheum21_contig00022912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00022912
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX95042.1| DNA mismatch repair protein pms2, putative isofor... 94 2e-17
ref|XP_006480112.1| PREDICTED: DNA mismatch repair protein PMS1-... 90 3e-16
ref|XP_006444299.1| hypothetical protein CICLE_v100188991mg, par... 90 3e-16
ref|XP_004292655.1| PREDICTED: mismatch repair endonuclease PMS2... 90 3e-16
gb|EMJ00930.1| hypothetical protein PRUPE_ppa002523mg [Prunus pe... 90 3e-16
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2... 90 3e-16
ref|XP_006359387.1| PREDICTED: DNA mismatch repair protein PMS1-... 89 6e-16
ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1... 89 6e-16
emb|CBI36837.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2... 88 1e-15
ref|XP_002321013.1| DNA mismatch repair family protein [Populus ... 88 1e-15
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] 88 1e-15
ref|XP_006840542.1| hypothetical protein AMTR_s00045p00213360 [A... 87 2e-15
gb|EOX95043.1| DNA mismatch repair protein, putative isoform 2 [... 87 2e-15
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [... 87 2e-15
ref|XP_006575115.1| PREDICTED: DNA mismatch repair protein PMS1-... 87 3e-15
ref|XP_003536886.1| PREDICTED: DNA mismatch repair protein PMS1-... 87 3e-15
ref|XP_003591551.1| DNA mismatch repair protein [Medicago trunca... 87 3e-15
gb|EXB36415.1| Mismatch repair endonuclease PMS2 [Morus notabilis] 86 4e-15
gb|ESW16288.1| hypothetical protein PHAVU_007G144100g [Phaseolus... 85 1e-14
>gb|EOX95042.1| DNA mismatch repair protein pms2, putative isoform 1 [Theobroma
cacao]
Length = 1017
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/68 (67%), Positives = 56/68 (82%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSKRH*VLRGVH 196
V+GQFNLGFIIGKLDQDLF+V QHAADEKYN+ERL+QSTI+NQQP L+R K R V+
Sbjct: 766 VIGQFNLGFIIGKLDQDLFMVDQHAADEKYNFERLAQSTILNQQPLLRRGKVMSKKRKVY 825
Query: 195 TITMLSVS 172
++S+S
Sbjct: 826 YALVMSIS 833
>ref|XP_006480112.1| PREDICTED: DNA mismatch repair protein PMS1-like [Citrus sinensis]
Length = 1058
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSK 223
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+ERLSQST++NQQP L+ K
Sbjct: 853 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 903
>ref|XP_006444299.1| hypothetical protein CICLE_v100188991mg, partial [Citrus
clementina] gi|557546561|gb|ESR57539.1| hypothetical
protein CICLE_v100188991mg, partial [Citrus clementina]
Length = 400
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSK 223
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+ERLSQST++NQQP L+ K
Sbjct: 195 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 245
>ref|XP_004292655.1| PREDICTED: mismatch repair endonuclease PMS2-like [Fragaria vesca
subsp. vesca]
Length = 913
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+
Sbjct: 708 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLR 755
>gb|EMJ00930.1| hypothetical protein PRUPE_ppa002523mg [Prunus persica]
Length = 662
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+
Sbjct: 457 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLR 504
>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
repair endonuclease PMS2-like [Cucumis sativus]
Length = 921
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+
Sbjct: 717 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLR 764
>ref|XP_006359387.1| PREDICTED: DNA mismatch repair protein PMS1-like [Solanum
tuberosum]
Length = 939
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSK 223
V+GQFNLGFIIG+LDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+ K
Sbjct: 734 VIGQFNLGFIIGRLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLK 784
>ref|XP_004247536.1| PREDICTED: mismatch repair endonuclease pms1-like [Solanum
lycopersicum]
Length = 940
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSK 223
V+GQFNLGFIIG+LDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+ K
Sbjct: 735 VIGQFNLGFIIGRLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPLK 785
>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK-----RSKRH*V 211
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+E L+QST++NQQP L+ S V
Sbjct: 637 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEV 696
Query: 210 LRGVHTITMLSVSRNGYA 157
+ +H M + +NG+A
Sbjct: 697 IASIH---MDIIRKNGFA 711
>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
Length = 937
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK-----RSKRH*V 211
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+E L+QST++NQQP L+ S V
Sbjct: 720 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRPLRLDLSPEEEV 779
Query: 210 LRGVHTITMLSVSRNGYA 157
+ +H M + +NG+A
Sbjct: 780 IASIH---MDIIRKNGFA 794
>ref|XP_002321013.1| DNA mismatch repair family protein [Populus trichocarpa]
gi|222861786|gb|EEE99328.1| DNA mismatch repair family
protein [Populus trichocarpa]
Length = 915
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+ERL QSTI+NQQP L+
Sbjct: 710 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLCQSTILNQQPLLR 757
>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSKRH*VLRGVH 196
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+E L+QST++NQQP L+ ++ +H
Sbjct: 3437 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRYG-----VQNIH 3491
Query: 195 TITMLSV 175
+T + +
Sbjct: 3492 EVTSIEL 3498
>ref|XP_006840542.1| hypothetical protein AMTR_s00045p00213360 [Amborella trichopoda]
gi|548842260|gb|ERN02217.1| hypothetical protein
AMTR_s00045p00213360 [Amborella trichopoda]
Length = 963
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIG+LDQDLFI+ QHAADEKYN+ERLS STI+NQQP LK
Sbjct: 766 VIGQFNLGFIIGRLDQDLFIIDQHAADEKYNFERLSHSTILNQQPLLK 813
>gb|EOX95043.1| DNA mismatch repair protein, putative isoform 2 [Theobroma cacao]
Length = 847
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIGKLDQDLF+V QHAADEKYN+ERL+QSTI+NQQP L+
Sbjct: 642 VIGQFNLGFIIGKLDQDLFMVDQHAADEKYNFERLAQSTILNQQPLLR 689
>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
pms2, putative [Ricinus communis]
Length = 924
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK--RSKRH*VLRG 202
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+E L QSTI+NQQP L+ R +
Sbjct: 719 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLCQSTILNQQPLLRSLRLELSPEEEV 778
Query: 201 VHTITMLSVSRNGYA----PFAKP 142
V ++ M + +NG+A P A P
Sbjct: 779 VASMNMELIRKNGFALEEDPHAPP 802
>ref|XP_006575115.1| PREDICTED: DNA mismatch repair protein PMS1-like [Glycine max]
Length = 946
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSK 223
V+GQFNLGFII KLDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+ K
Sbjct: 740 VIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPIK 790
>ref|XP_003536886.1| PREDICTED: DNA mismatch repair protein PMS1-like isoform X1
[Glycine max]
Length = 944
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLKRSK 223
V+GQFNLGFII KLDQDLFIV QHAADEKYN+ERLSQSTI+NQQP L+ K
Sbjct: 738 VIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPLLRPIK 788
>ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
gi|355480599|gb|AES61802.1| DNA mismatch repair protein
[Medicago truncatula]
Length = 933
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFIIGKLDQDLFIV QHAADEKYN+E LSQSTI+NQQP L+
Sbjct: 727 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFECLSQSTILNQQPLLR 774
>gb|EXB36415.1| Mismatch repair endonuclease PMS2 [Morus notabilis]
Length = 938
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQP-----SLKRSKRH*V 211
V+GQFNLGFIIGKLDQDLFIV QHAADEK+N+ERLSQSTI+N QP L+ S V
Sbjct: 733 VIGQFNLGFIIGKLDQDLFIVDQHAADEKFNFERLSQSTILNLQPLLRPLRLELSPEEEV 792
Query: 210 LRGVHTITMLSVSRNGYA 157
+ +H M + +NG+A
Sbjct: 793 VASMH---MDIIRKNGFA 807
>gb|ESW16288.1| hypothetical protein PHAVU_007G144100g [Phaseolus vulgaris]
Length = 829
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -2
Query: 375 VVGQFNLGFIIGKLDQDLFIVHQHAADEKYNYERLSQSTIMNQQPSLK 232
V+GQFNLGFII KLDQDLFIV QHAADEK+N+ERLSQSTI+NQQP L+
Sbjct: 723 VIGQFNLGFIICKLDQDLFIVDQHAADEKFNFERLSQSTILNQQPLLR 770